Array 1 35464-35865 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJQY010000052.1 Pseudanabaena sp. FACHB-1050 contig52, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 35464 37 100.0 36 ..................................... GTGGGACAGTCCTCTATCACGACTTTCTTGATAAAC 35537 37 100.0 33 ..................................... CCACAACAACGCCCATCTCTCTATCGTTGTCAC 35607 37 100.0 38 ..................................... CATTGCATATAATCAGTAGGCATGTATACATTTCCTGT 35682 37 100.0 37 ..................................... AATGTGTTGATTCTTAGGTGATCGCCGAATGTAGATT 35756 37 94.6 35 ................C...............A.... GGTTGATAAACTACATGATCAAGATTCATGCCAGT 35828 37 91.9 0 .....G..........C.........T.......... | T [35861] ========== ====== ====== ====== ===================================== ====================================== ================== 6 37 97.8 36 GTTGCAATCTCTCTTCTAGAAATATGAGGGTTGAAAG # Left flank : TAATGCTTATCTAGCTAGGAAATAATTTTTAATAAGATTTGCGGAATCTTGACAATTAGAGAATTTTTTTGCATAGTTTTTTATAGCGCCGTAGTTCATGGTTGTTTTCAATCCTCTGTGCTACGCAAGTATGGGTTAGTTTGACTGTTAGTTAAGGCGGTCTTGCTTTCTGACCCTTGTGGCTACTCGCTCTGATGCTGCCGTTGCAAGACGGGAATAAGGTGCGCTCCCAGCAATAAGGGTATAGATTTACTTACTTTAAGTAGTGGCTACTGAATCACCTCCGAGCAAGGAGGAACCCTCTTTTTTTACGCGAACCTCAAGCAAGGTCTAATTTCCTGACAGGTTCGCGCAATGTCTGAAATGTTTGTCAGTAAATAATTTCGATTTTATATTTGCTGGTAAGTATTTCTTAATGTTGTTTCTGGTATGAGTTAATAAATAGGTTCGCACTTTGTTTGTTTAAATGCTTTACATAGCAAGGCTTTTAAGTAATCAGG # Right flank : TACATCTCTGTCTTAGCTAAAGGTATAAGAATACAAAGTTATGATCGCTATTTTAAGAACGAGTAGGCTGAAATTCTTTGATTATCCCTCAGCCCCGAAACCATTAGGAAGGCGATCGCAATAGTTCGACGACATTAATTTGTTAACAATAAGAAGATATCTGTATACTTCTAGTATTATTAATAACGACACTAATTTGTTAACGGCGACAAGTAATGTGTTACTCGACA # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAATCTCTCTTCTAGAAATATGAGGGTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.20,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 18656-14121 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJQY010000053.1 Pseudanabaena sp. FACHB-1050 contig53, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 18655 37 100.0 36 ..................................... GTATCTAGAGCCTTCGTCTAACCAGTCGAATTTCTC 18582 37 100.0 35 ..................................... CAATGATCTCCAATTTGAATGCCATGGGCGAAGAA 18510 37 100.0 40 ..................................... GCATAATGCCACTCGCTTGCTTGGCGGATGTGCGCGATCC 18433 37 100.0 35 ..................................... AAACTGAGTATTAGAAGCAATTAAGGCGATAATCG 18361 37 100.0 35 ..................................... ACGAAACTTGCCCCTGTGGTGACATGGATGTTTAT 18289 37 100.0 35 ..................................... TTTACCGTTTGACCCTTCACCTTGCATGAGTAATG 18217 37 100.0 35 ..................................... CATCTTGTACCAAGGATATGGAAGATAGGATTAAA 18145 37 100.0 35 ..................................... AAAAGGTTCGCCCAACTGCCTCTTGAGAGACTTGT 18073 37 100.0 35 ..................................... AGATTCGTACTTTTTGATAGCCATATTACTCAATG 18001 37 100.0 34 ..................................... AACTGTACGGTGGTGACTCTGACGGGGGTTGCAC 17930 37 100.0 34 ..................................... ACATCTTCATTAGGGAAAGGCGACACAAATACGC 17859 37 100.0 36 ..................................... CGCTAACGATGGCGGCGCTATGGAAAAATTGAGAAC 17786 37 100.0 36 ..................................... CTACTACCACCATACTAAGCGATGCAGACACGAAGT 17713 37 100.0 35 ..................................... TACAGAAAACTAGCTGAACATGGCAAACATTGGCA 17641 37 100.0 34 ..................................... AAAGAAAGTGATTGATGACGATTACTTCTAAACT 17570 37 100.0 37 ..................................... GCAGATTCTCCCAAAGACTTGTAATCAATCACCATAG 17496 37 100.0 34 ..................................... AAAAAAGGGCGCTATAGATATCGTGTATTGATTA 17425 37 100.0 34 ..................................... ACGACAGCTACAACGACGCTCACAGCAGCTATAA 17354 37 100.0 39 ..................................... TTATTGGAGCTAGTCCATCCGCGATATTGAACATGGTAA 17278 37 100.0 36 ..................................... GTGCTAAAAACGCTCTTGCTTTGCGAAATACAAGAT 17205 37 100.0 36 ..................................... TGCCAATTTCTGCGATCGCAAAGTACCACCCTCAGC 17132 37 100.0 35 ..................................... ATTAACGGTATCCTCGGCATGATTGCACTAATATC 17060 37 100.0 34 ..................................... TACTAGCGGTTTGGTGCGTAGTGGCGGTGGGACT 16989 37 100.0 35 ..................................... GCTCAACTTAGGAAGGATAGAGAAGACTTTGAGAA 16917 37 100.0 36 ..................................... CGTAGTAGGGACGAAGTATTCACCAAGCTTGCCGAA 16844 37 100.0 35 ..................................... AATGCCAGAAAAGATGACTTCACAAAGCGATTAGG 16772 37 100.0 35 ..................................... AAAACGTTCCCATTTACATTTGGGGTATAACCTTT 16700 37 100.0 35 ..................................... TTTTATACGACCGCTACCCAACTTTGTTCAGGTTT 16628 37 100.0 35 ..................................... GGGTATAGCGGTACTTCAAAAGCATTACGCACACT 16556 37 100.0 35 ..................................... ATCAAAGGCGAGCTTCGATGCTTGCTGATTTGCCT 16484 37 100.0 35 ..................................... GGATCGGGGCTAGGTTTGCGCCCTGCCCCTTTGGG 16412 37 100.0 34 ..................................... ATGATTAACAACTATTTAGAAATACTGAAATACT 16341 37 100.0 34 ..................................... TTTGCTTCCGTTAATCTTAATTTGATATCATCTC 16270 37 100.0 35 ..................................... GCTGGTGTGCCAAGCAAGGAGAAATTGCAGCCATT 16198 37 100.0 34 ..................................... ATCCATGGTAAAAGTTTATTAACTAAGCAACTTA 16127 37 100.0 36 ..................................... AGAGATCTTCACCGATTCAGGGACTTGATTACAGCG 16054 37 100.0 36 ..................................... GTGGCTGAGGCGCAGTCGAAGCGCGCTCGTATTGCT 15981 37 100.0 35 ..................................... ATTTGATGACCCTAGCCTATGGGCTCTCCGATATT 15909 37 100.0 34 ..................................... AAGGTGATCCTTTAAGTTGATCCTGTGGTGGATC 15838 37 100.0 34 ..................................... ACGGGTGATGATTGGATCTTTGATGTTTACAATC 15767 37 100.0 36 ..................................... TTGAGCTGTAAACCTCAAAATCTTGAATCTCCGTTG 15694 37 100.0 36 ..................................... TCACTACTTCCAACGGGATAGACGTTTTTGATGCTG 15621 37 100.0 35 ..................................... CACATTTGTGGACGCTACAGTCGCCTTAATCCGAT 15549 37 100.0 35 ..................................... AATTAAAATACTTTCTATTTCATACAAGAAAGGCG 15477 37 100.0 33 ..................................... TTTTGAGTTCAGGTGTGAGGTTAGACATTTTCA 15407 37 100.0 40 ..................................... AGGGGCAAAGTTCAGTTGCGCTCTTTGCAAAGCCGCCGAT 15330 37 100.0 38 ..................................... TCGCCGATATGAGCATATGAAATAATTTTGTCGATTAT 15255 37 100.0 35 ..................................... ATAATAAGTGAAACCAAACAAAAACAACTAAACCA 15183 37 100.0 36 ..................................... TGAAACTGATATCAAGACTTTGCAAACTGAACTTGA 15110 37 100.0 41 ..................................... TTTGAAACTAATTCTATTTGCATTGCGAGAGCTTATCCAAT 15032 37 100.0 35 ..................................... GTAGCCATTGCAAACAATCAGAGCTTGTGGACAAT 14960 37 100.0 36 ..................................... TCCAAATTCACGCAAGTGAGAGAAGCTACAAACCCT 14887 37 100.0 44 ..................................... AGACGGAAACGGAAACGTTGTAAGCATCGACGGACGCGGCGGAC 14806 37 100.0 37 ..................................... AGCCCAAGCGGCGCGCTCCAATCGCCAGCAACAAAGT 14732 37 100.0 35 ..................................... TTTCGATGTGGCGATCGCGTGCTTGATAGCTTGGA 14660 37 100.0 34 ..................................... AATTGCAAGTAGACCTGCACTTAAGGCTATTGTG 14589 37 100.0 35 ..................................... AGAATCAGCAAACCTCAACGTATTCATTAATGCTT 14517 37 100.0 36 ..................................... TGGTTTACCCCTGGTCAAGCACGGGCAGGACTCTCA 14444 37 100.0 35 ..................................... GAGCGACTACCAGATCTGGAAGCATTTCTTTTGAT 14372 37 100.0 35 ..................................... CTGATGAACAGAGAGATCGGAGATATACGTATCTT 14300 37 100.0 35 ..................................... TGAATGCGGCTAGCTCTGCCTCTTGAGCTAGCTTG 14228 37 97.3 34 .C................................... AAAACCTGCTCAAGTGATTTTGGACTATGCAAGG 14157 37 97.3 0 .......G............................. | ========== ====== ====== ====== ===================================== ============================================ ================== 63 37 99.9 36 GATTCAAAGCCTCTGAAACCCTTTTAGGGATTGAAAC # Left flank : GCCGTACTAAGATTCATAAGATTCTCAAATCCTATGGGCAATGGATGCAGTTTAGTGTGTTTGAGTGTGAGCTGACGGATGCTCAATATGCAAAATTGCGATCGCGTTTGAGTAAGCTAATCAAGCCTGATGAGGATAGTATCCGTTTTTATATGCTATGTGCTTGCTGTCAGCCTAAAATAGAACGTATTGGAGGTGAACAGGTGCGAGATAATACAATATTTTTCGCTTGATTTCTAGTTCATTAGTTGCGCGAGTTGGTGGATGTTTTTTAATAGTATGCAGTTTGGTGTTTTACAAGTCTTGGCTGGTATGTTTTTGATGGCGATCGGGCGAGTTTGTCGGTTCGCGCAGGGCTGGAATATGTTGGTAAATATAGCTTTTTATTGGCTGGTGCAAGTTGTAAATCCTGTTCAGCAAGTCCAAATCTGCTACAATTTGTATGCTTCGCGCAAATGCACCTTGAAAATTAAATATGATATGCTTCATAAGCGCGGGCG # Right flank : AACGGCTTAGAGCATCCTTGAATTGGCGATTGCTTTTCTTGCTTGAGTTCGCACTTTATTACCGATTATCTATCAAACAATACGATCTCTGTGAAATATACCCTTAATAATAAAACTCTAGGACTTACTCATCTAACCAATGCGTAAGTCCCAAGTAGCTAGGCGCAATTAAATATAAAACCCCAAAACCTGTGGCACACAGCGTGCGCCACAGGTTTTGGCTCTAGTTTTTAAGTAAGCCTAACTACCCAATCTTATAAAATTAGAAACTTTGTACAATCATGAGCGGACTTGGCGGATTAAATAAAACCCCTAACGGTGTAGTAATAGGGATGGTGCAACTTCAATTGCCCACAGTTGTCACCAAACAAGACTTAGCTACCCAAACTCAACGTATTTGCGAGATGGTCGCCAAAGCAAGGCGAAACATGGCAACCATGGATCTAGTCGTATTCCCAGAATACTCCTTGCATGGTCTATCGATGGATACCAATCCAGAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTCAAAGCCTCTGAAACCCTTTTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 1 11324-10526 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJQY010000057.1 Pseudanabaena sp. FACHB-1050 contig57, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================= ================== 11323 35 100.0 45 ................................... ATCATAAGCTTCTTCTCTTTCTGATTTAGCAAAATCTAATACTCC 11243 35 100.0 41 ................................... TGGTTAGAATGAATTTACACAAAGAAACGTGAACGCCTCCT 11167 35 100.0 39 ................................... TAAGCGCACCAATTACCGAGGCAAGAATCACAGGAATAG 11093 35 100.0 43 ................................... CTGAGATTTCTACGAGCAAACCCACTTCGTTTCACAAAGGTTG 11015 35 100.0 37 ................................... AGCCTTTATCTTGCAGTAAGTCAAAAATTTGCATGAC 10943 35 100.0 41 ................................... TCCCAGTCTTTGCTAGCTTCAAAAGAGAGGATAGCGTAAGA 10867 35 100.0 43 ................................... AATATTATAATGGCCAAGCATGAAAAAATTACAATCACATGTA 10789 35 100.0 42 ................................... TTGACGAACCTTTTGTTCGCTGTTGCTTTCAAGTGCAGCCCG 10712 35 100.0 38 ................................... ACTTACTACTAACCAAGTAGCCAGCGCTTTAGAAGTCA 10639 35 100.0 44 ................................... CTTACAGGAGCAATTGTTGGAGCAACGGTGTTGTTCGGAGCAAT 10560 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ============================================= ================== 11 35 100.0 41 GTTTCATACCCATTTCCCCGCAAGGGGACGGAAAC # Left flank : AATGCTAAAGTTGTTGCGAGCGCGTAAAATCATTTTCTTGATTTTCATTCTTCGACCTTCGATCTTCCGTCTTTCCCCTAATGCTTGACCTACGCAATCGCACCAAAAGCGATCAAAAAGCAGTATCAGTAGGTAAAAAGCCAGTAAATCCACTGGAGGATAATTTTCATTTTTATTGGATACTGTCTGATGCTTTGCCAAAGGCTTTAGCGATCGCGCTGGTGCGTTGCCAAAGCCTCCACCAAATGTTTACATTATTTAGGTTGACTTTTTTGTTTTTAGCCTTTAGTGTGATTTGTATCGTCAAATCGACGCATCCCCCTCGAACCTTGAAAACCGCATAATCTCGTTGAGGTGTGTCGATGATATACCTAGCAAGGGTTCCAAGATGTCCGTTTTCTTGAAAACCTGTCAATAAGGTGTTCTTATTGAGACTAAAATGAGGTGTGTCGATTGACCCCTTTGAAATGTTTGCTAGGTATGGCTTAAAAATTGCAAGT # Right flank : GGAAGGGAAAGAGAGAAGACTGAAGATCGAAGAGGGAAAGAAAGACGAAGCACAAAAAAACATAGAAATGCTAAAAATTATCGTGATCGCGTAAAATTACAATCTTAAATTTCATTCTTCGATCTTCCGCCTTTTACTTCCCCCACTTCACAAACCCAAAATATAATCCATGATCAATAAACAAACCGATCCCATCAGAGAAAATCGAATTGACTATGAAATAGTAGTCGATGCCTACGACGAATCAGAAAGAGCAATGGGTTGGTACTACTACCTCCAAGACAAAATCACTTTCCCATTTCTTGCCAAATGGAAAAAGAAAACTAGAAAAACAGGTGCGATAGCCGAAAAAGAAGTTGAAGTGTTAAGCATGGCTTCAGAAGAAGATTGTGAAAGCAATATGTATGTCGAAGTAGCCTACATTGGCGAAAGCGATGACACCTTTACCGCAAAACTATCAGATATCGAAGCCATAAACCCAGATCCAGACACCGAAGAAG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCATACCCATTTCCCCGCAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.74 Confidence: HIGH] # Array family : NA // Array 2 14355-13726 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJQY010000057.1 Pseudanabaena sp. FACHB-1050 contig57, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================== ================== 14354 35 100.0 40 ................................... TTGATATTGTTTTCCGATGCCAATTGGGCACGAAGTTGAG 14279 35 100.0 40 ................................... CCTCCAAGCATGAGAACGCAGCCTGCCAAACAAAACTGAA 14204 35 100.0 40 ................................... CCTTTCGCATCAGTGATGCGCGTGTCCCGAATTGATTGCA 14129 35 97.1 37 .........A......................... TTTACTGAGCCCGTTTGTGACATCGTGGGGTACACAT 14057 35 100.0 40 ................................... TTTCAAATCAGGATTGGCTGCAGTAGTGCAAAAATGCCAT 13982 35 100.0 42 ................................... GCAGAAGCAGAAACATCACCAAATTGCAACGCTAGAGCAGTT 13905 35 100.0 36 ................................... TTTGTTTACTTATATCTCCTGCACTTATTGCTTTGC 13834 35 100.0 39 ................................... CCAGAAAGTACCTAGATAGTTAACACTAGAGTTGTTGAT 13760 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ========================================== ================== 9 35 99.7 39 GTTTCACACCCATTACCCCGCAAGGGGACGGAAAC # Left flank : CGATATTGCTGATGATAAGCGCCGTCTCAAGTTATCAAATTTTCTTGAGGGGCATGGGCGGCGTGTGCAAGAAAGTGTGTTTGAGTGTTTTATAAGTTTAGATGACATGAAAAAACTGCACGTTAAAATCAAAAAACGGGTAAAGCCTGAGGTTGATAATGTGCGGTTATACTGGATACCGTCGGATGCGTTGCCTAAGTCTCTGACTATCGGCAGCAATCCACCAGCACCTCCGCCTAGTTTTTACATAATTTAATATTATTAAACTAGACAAAATCTTGATTTTGCAGTTATATTTTTTGGAATCACCTCCATAGGTGGCAAGAACCTTGAAAACCGCATTATTACGTTGACCTCTGGAGGTCGCGCTCTCCATAAGGGTTTCCGCTTTTATGTTTGTAGTCTTATTGCGAATTTAGCAAGCTTATTGACTATGTAAATGACCTATGGAGATCGACCCTATTAAAAGCTTTACTGTGTAAGCCTCAAAAATGTGAGGG # Right flank : GTAAGAGAAAGGTCGAAGAATGAAGATCGAAGAATGAAAAAAGAAAGAAAAAACATAGAAGTACTGCAATCATGTAAAATCGAACTCTTAATTTCATTCTTCAGCCTTCATTCTTCCGCCTTTCTAACTATGTTTGACCTACGCGATCGCACCGTAGGGGCAAAGCATTCCCGCCGCAATTTACCAATTTGCAGATAACCTCAAATCGGGAATGCTTTGCCCTAAACCTCCGACATTCGCCGACAAATTCTTAACCGCAGTCCTAATTTGTTGGTGAATCGCATCAAGGGTTTAGCATTTGCGAATAAAAATAGGAGTAACAATTTAGAGGGATTGGCACAAATGCTAAACCCCTACAAATCAATATTGGTATAGGTTATAGCGATTTTTTAATCTTTGTTTTTTGTCCTGTACTAAAAGCTAGAGCTATTGGTTGAAGAAGAAAAAACGGAAGGTGAAGGCGGAAGAGTGGAGAAAAGATGAAGATTAGGGAAAATATT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCACACCCATTACCCCGCAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.60,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,0.74 Confidence: LOW] # Array family : NA // Array 3 17197-16849 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJQY010000057.1 Pseudanabaena sp. FACHB-1050 contig57, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ======================================================= ================== 17196 35 100.0 45 ................................... TATACAATCAATCCACCATCAACTGAAGCTACTCGTTGGCAGCCT 17116 35 100.0 55 ................................... GTGATTCTTCCAATACGGAAGAATCACCAGCCAAGAGAGCATAGGTAACATAACG 17026 35 100.0 38 ................................... TGAATACTAAGCTCAAGCCTACATTTAAACAAGCTTTT 16953 35 100.0 35 ................................... ACTATTTTGTTCATACTAATGAAAAGATAAACAAC 16883 35 82.9 0 ......TA..C.TTT.................... | ========== ====== ====== ====== =================================== ======================================================= ================== 5 35 96.6 44 GTTTCACGCCTAACACCCCGCAAGGGGACGGAAAC # Left flank : TTGATGAGTTGGCTGATCTTCCTAATGCTAGGGCGATCGCGACTTTATGGAAGGAGTTGGCTAATTTGCGGAATGATCTGGCGCATTGTGGGATGAATAAGCAGCCGATGGTGGCTACGAATATCCGAGAAAAGGCGATGGGGATTGGGCGATCGCTGATTGATATTGAAAAGTCTTTATTGGGTTAATTACGGATTTCAAAAATGTGGAATCATTTAGTTATGGTGGCTTGACTGTTAGCTTTTACATAATTTAATGTTATGAAGCTAGACAAAATCTTGATTTTGCAGTTATAGTTTTGTCAGTTACCTCCATAGGTGGCAAGAACCTTGAAAACCGCATTATTACGTTAACCTCTGGAGGTCGCGCTCTCCATAAGGATTTCCGCCTTTACAGTTGTAGTCTTATTGCGAATTTAGCAAGCTTATTGACTATGTAAATGACCTATGGAGATCGACCCTATTAAAAGCTTTACTGTGTAAGCCTCAAAAATGTGAGGG # Right flank : GTAAGAGAAAGGTCGAAGAATGAAGGTCGAAGAATGAAAAAAGAAAGAAAAAACATAGAAGTACTGCAATCATGTAAAATCGAACTCTTAATTTCATTCTTCCGCCTTCATTCTTCCGCCTTTCCATATATGTTTGACCTACGCGATCGCACCAAAAGCTTTGCATTGAGAATTGTGAAATTATATACATCACTGCCCTAAAGCACCGAAGCCCAAGTATTAGGAAAACAAGTACTGAGAAGTGGAACATCAGTTGGGGCGCATTATCGAGAAGCAACCCGTGCGCGATCCAATGCGGAATACATCAGTAAAATTGAAGTTGGACTGCAAGAGCTAGAAGAAAGTATTTACTGGCTAGAGCTATTAGCTGAAGCTGAGATTATCAAAGCATCTAACTTAGCTAATCTCATTCAAGAAGCGGAAGAACTGATTGCGATTTTTGTGACTTTGGTGAAAAAGGCGAAAAATAAAGACGGAAGAACGAAGGTCGAAGAGTGAAG # Questionable array : NO Score: 2.66 # Score Detail : 1:0, 2:0, 3:0, 4:0.83, 5:0, 6:0.25, 7:-0.22, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCACGCCTAACACCCCGCAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.50,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,1.15 Confidence: MEDIUM] # Array family : NA //