Array 1 15066-13775 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRPK01000046.1 Amedibacillus dolichus strain AF35-6BH AF35-6BH.Scaf46, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 15065 36 100.0 30 .................................... AAAACATGCTTGGATCTCTTGGTGGGATTA 14999 36 100.0 31 .................................... AAACACAATAAAGAAAAAAGAAAAGGACTCT 14932 36 100.0 30 .................................... ATTGAGAGCGGAAATATGATTGTTGAAGAT 14866 36 100.0 30 .................................... TCTACGATTGCGGTTAAGTTTGACATTTTA 14800 36 100.0 30 .................................... CAGTGTATCATCCATCAGATCCGTAATTCA 14734 36 100.0 30 .................................... TCTGTATTATCAATCTGCAATAGAATAGTC 14668 36 100.0 30 .................................... AACAAAGCGAATATCAGCGGCTCACAAGTG 14602 36 100.0 30 .................................... GTTGGTACGCCAATACCAGACCACGAATAC 14536 36 100.0 30 .................................... CAAAACAAAAAGTACAAATTCAGTTACTAA 14470 36 100.0 30 .................................... CTTGGATTTGCTCATTAAGCTGTTTCACTA 14404 36 100.0 29 .................................... ATCAGTCTGTATATCAAATGATGAAACTC 14339 36 100.0 31 .................................... TCTAACGTCTATTTCATCGGCGCGTAATGTT 14272 36 100.0 30 .................................... GATACCACAAACGTGGATTTGCTACTGCCG 14206 36 100.0 30 .................................... ATTAGACTTCCCTTTTGTTATAAAAGATGA 14140 36 100.0 30 .................................... ATCACATGGAAATTGAAAGATGAAGAAGTT 14074 36 100.0 30 .................................... CATTACATGATAAAGACTTTAATCCAAATG 14008 36 100.0 30 .................................... AGCAAATGACAAAACACGTGATGAACGTAT 13942 36 100.0 30 .................................... ATAGAAGCATGGGGATATGTAAAAAAAGCA 13876 36 100.0 30 .................................... CAACTGCATCGATTGCTTGAAATTCTTCAA 13810 36 94.4 0 .................................A.A | ========== ====== ====== ====== ==================================== =============================== ================== 20 36 99.7 30 GTTTTGTTACCATATGGATTTTTGCTAGATTAAGAC # Left flank : AAAAATATGATAAAAGACTATTTTATAAAACTGAGTAATGGAACAAAAAATGATATTGTAGATTTGATAATGAAATAAATATATCCCAAATTCAAATACATATGTTAAAATATGTTTGA # Right flank : TGGATATCCAATCATATGAGACACTATGATGGATATTTTTTATGCTTTTACAATAATACAGTGTATTTATTACAACATCTTAAGAATGTAAGACATTGTTAGAGGTTTTTGTTATAATTACGTAGGAGTGAAGTCGATGAAACAAAAGAGAAAGCTTAAGACATCGAAGGCTTTATCTAGTATTGCGATTTTAGAAGGAATTGTGATTGTCAGCATGGTTATTCTTTGTCTTGTCAAAACAGATCTTCCTATTGTAGAAAGTATCTTGCCGGAACAGCTACACGGATCAAAGGAGTATGATGTGGTTTTAGATGCCGGGCATGGAGGTTTCGATAGCGGAGCGATGGATCAAAATTTGATTGAAAAGGATATTACTTTGCAAATGAGTAAGCAAATAGGTAAAATACTTGAACGGCATGGCTATAATGTTGCCTATATACGCGAGGGTAATGCGATCGATTGGGCAACTGATGAACTTTCTGATTTAGCTTATCGTGTAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGTTACCATATGGATTTTTGCTAGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTGTTACCATATGATTTTTTGCTAGAATAAGAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //