Array 1 8583-9092 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMCI01000037.1 Enterobacter kobei strain 151B8 151B8-redeposit_S3_R1__contig_37, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 8583 28 100.0 32 ............................ GTTGGCAGTGGGTTCACTCTCACAACGCCTGA 8643 28 100.0 33 ............................ TGATGGTTGGTTATGCACGAGAAAAGGGAACGA 8704 28 100.0 32 ............................ TGCACTAACTGATTGATGCGAGGGTAGTTGTA 8764 28 100.0 32 ............................ AGTCATTTCAACGGGGCCATATCAAAACGTGA 8824 28 100.0 32 ............................ TGTTGTACTTCAGGCGACAGCGGCAGTTTTTC 8884 28 100.0 32 ............................ AGGAAACCCTTCTGATCCATGAGAACGAATGG 8944 28 100.0 33 ............................ CTACACTTCGGGTTACGATCAGCCATTTCAACT 9005 28 100.0 32 ............................ GTCGCTATGAGCTGCACCGGCTCAACAAAAAC 9065 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 9 28 100.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGGTTTGCACAAGTTATTCGGCGGCGTGGGCTTTATCAGCGGCATGCTGGTGGAAAAAGGGTTGCCGGGGTTTATCGCTTATGGCGTGTTGATTGGCGAAGTGGTGGCACCGATGTTGATTATTGTCGGGCTCTTTACGCGCCCGGCCGCGCTGATGCTGGCGTTTACGATGATTGTGGCATGGCTTATGGTAGGAATGGGTGAAACGCTCGCCCTCGATAAGGTTGGGGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTATTGGCTCGCTGGCGGTGGCATTTTTAGGGGCAGGGCGGTTTGCGCTGGGGAAAGCACCGGCGTGGCGTTGAGGTTTGTGCTCTGGTATGAAGGAAGGGGTCTATAGACCCTTTTTTATTGGCTGTTTTTAACTTATTGATTTTATTGTGCTGAAATGTATGTGAAGAAAAAAGGGATCGAGACGATTTTTTAGGTTATTTCTTTATCTGACAACGTGATAGGTGTAGATTGTTCCA # Right flank : AAGAATCCCGGAGGACGGGATGGTGTTAAAACTGTGCACTGCCGTACAGGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAGGCAGCTTAGAAATCTTTAATCCGAGCCTCAAGGACATCGTTTGTGTTCACTGCCGTACAGGCAGCTTAGAAAGAAAACCTCCTGCACGGAGGCGCGAAAACAGATTTCATTGCCGTACAGGCAGCTTAGAAAAGTCCGACACTGTGTTTCCGTCTGTTCAGTACGTTCACTGCCGTACAGGCAGCTTAGAAAACAATCTGAACTCCTTACCTTGTCACAGATGCGCTTAGTGCAATACAGGCAGCTTATAAAGTCGCGGAATACAACGACGCCATCTATCAATAGTTCACTGCCGTACACGCAGCAACCATATGTAGTTCGGCACAAACACTGTGCCGCCTGATTATAAGCCCGGTGGCGCTAGCGCTTACCGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 9202-9469 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMCI01000037.1 Enterobacter kobei strain 151B8 151B8-redeposit_S3_R1__contig_37, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 9202 28 57.1 32 NNNNNNNNNNNN................ TCTTTAATCCGAGCCTCAAGGACATCGTTTGT 9262 28 100.0 32 ............................ GAAAACCTCCTGCACGGAGGCGCGAAAACAGA 9322 28 92.9 32 T....T...................... AGTCCGACACTGTGTTTCCGTCTGTTCAGTAC 9382 28 100.0 33 ............................ AACAATCTGAACTCCTTACCTTGTCACAGATGC 9442 28 78.6 0 .C.T.G...AA.............T... | ========== ====== ====== ====== ============================ ================================= ================== 5 28 85.7 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GAGTTCACTGCCGTACAGGCAGCTTAGAAATGCACTAACTGATTGATGCGAGGGTAGTTGTAGTTCACTGCCGTACAGGCAGCTTAGAAAAGTCATTTCAACGGGGCCATATCAAAACGTGAGTTCACTGCCGTACAGGCAGCTTAGAAATGTTGTACTTCAGGCGACAGCGGCAGTTTTTCGTTCACTGCCGTACAGGCAGCTTAGAAAAGGAAACCCTTCTGATCCATGAGAACGAATGGGTTCACTGCCGTACAGGCAGCTTAGAAACTACACTTCGGGTTACGATCAGCCATTTCAACTGTTCACTGCCGTACAGGCAGCTTAGAAAGTCGCTATGAGCTGCACCGGCTCAACAAAAACGTTCACTGCCGTACAGGCAGCTTAGAAAAGAATCCCGGAGGACGGGATGGTGTTAAAACTGTGCACTGCCGTACAGGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : AGTCGCGGAATACAACGACGCCATCTATCAATAGTTCACTGCCGTACACGCAGCAACCATATGTAGTTCGGCACAAACACTGTGCCGCCTGATTATAAGCCCGGTGGCGCTAGCGCTTACCGGGCCTACGACGATCCAGCCCCTACAAGGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAACGGGGGCACCGCATCAGATTATGCGAGGACCAGATCCCCCTGCGGATGGCATGAGCACGCCAGCACGTAACCTTCGGCAATTTCCGCGTCGGAGAGCGTCATGGTACTGGTGACAGTGTACTCACCTGAAACCACTTTCGTCTTACAGCAACCGCATACGCCCGCACGGCAGGCGGCCACTACCGGTACCTTATTGCTTTCGAGTGCCTCCAGCAAAGTCGTTCCCACGCGGCCAAAGAAGGTCTGCGCAGGCTGTAGCTTAGTAAACTGAATCCCGCTGGTTGCCGCCTCCGCTACCGGCGTGAAGAATTGCTCC # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.29, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.85%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.70,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [1.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.68 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //