Array 1 2825927-2827133 **** Predicted by CRISPRDetect 2.4 *** >NC_014166.1 Arcobacter nitrofigilis DSM 7299, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2825927 30 100.0 36 .............................. GATTATCACAAAGAAAATAGTGATATTTCAGTTTAT 2825993 30 100.0 36 .............................. ATAAAAAGTTTGGAACAACAATTATTACTAAAGCTC 2826059 30 100.0 35 .............................. ATTTTATTAGATTGGATTGAAGAGTTTCCAGAAAC 2826124 30 100.0 34 .............................. TTCGTATAATCAAAAAATTCAAATTCTTTATTTG 2826188 30 100.0 35 .............................. ACACTTTCACCTGTCACTCTACTCGTGGCACAGAG 2826253 30 100.0 38 .............................. TAAAGAAGTTAAAGACTATTTTGAAAAACTTTGTGATG 2826321 30 100.0 36 .............................. AAAACAAGACCTATACAAATAGAGCCTTGGTTTTTT 2826387 30 100.0 36 .............................. GGATAAACCACAAGAAGATATTAATATTGTCAATAC 2826453 30 100.0 36 .............................. ATATCTCATTTGGCAATTCAATATAAATCTTATTAT 2826519 30 100.0 34 .............................. AAAGTTACTCAATTTGGTTGGGTTGTTAGCCCTA 2826583 30 100.0 36 .............................. AAAGATGATAAGACTATATTAGATAGAATTCAAATT 2826649 30 100.0 34 .............................. TTAATAACAGTTTCTGCAAATTCTTTAGCATTTT 2826713 30 100.0 36 .............................. TGAGGAAAAAGAAAAATACAAAAGTGAATCATGGAA 2826779 30 100.0 35 .............................. AAAATATATAAGATTAATAAGCCCACAATCAAAAG 2826844 30 100.0 35 .............................. ATAAAACAGAAAGAGAAATGAGAAAAATCTTAGGA 2826909 30 96.7 36 ..........A................... TAATTTTTATACTTGCAATAATTGCGGAATGACACT 2826975 30 96.7 35 ....................A......... TAAGATAATCAAGTTTTCCAAAACGAGGAAACTCT 2827040 28 90.0 35 ................--...........C TCAATATATTCAATGCCATCAAGTTTTTTTAATTT 2827103 30 76.7 0 T.....TG.CA......A.....C...... | A [2827106] ========== ====== ====== ====== ============================== ====================================== ================== 19 30 97.9 36 CTTGAACCAAGACATATGATGTATTGAAAT # Left flank : TTATTAAAAGAGAAGATGTAATATGGCTAAAAAACAAAATATAAACTACAACTATGTATTTTTGTTTTATGATATCGCAGATGAGTTTAGCGATATAGGTAAATATAGAGTTGCGAAAGTTTTTAAAATATGTAAACAATACCTAAAACACCATCAAAAATCAATTTTCAGAGGAAATATAACTCCTTCTGATCAAATAATGTTAGAAACAAAACTAAAAAAAGTAATAGATAAAGACTTGGATTTTATCTCCATCATAAAGGTACAAAACTCAGGAAGCTTTGCAGAAGTTATTATAGGAAATGATAAAAAAGAATCAGAATCCATCTTTATATAATTTTTCCAAGCTACTTAAAAACAATATCATCTAAAAACAGCTATAATAAGGCACTTTTAAAAAGTTCTTTCACAACTTATTGTTTTAAAATAATCGTTTGGAAAACTTCTTTAAAGAACCAATTAAAGGGAAAGTATGTTTTAGAAATGCCTAAATCATCTTC # Right flank : TCGAAAGAATTAATAAAACTCTAAAAAAACTTATTTTAGATAGCTTAGATTAAGGCCTATAAAAAGGCTTTTTCTAAAATAAAATCATCTTTTCCTTGACATTAGTTAGATATCTAACTATACTTTCAATATAAATAGTTAGATACTTAACTAAAATGAAAGGATAAAAGATGAAAAAGAGTCTTGGAATATTAATATTTGTTATTTTAGCTTTTATAGCTTGTGTAAATACTACAAATTTACAAAAGCAAAATAAACAAATCACAAAAAAAGAAAAAGTTGTTGAGTTATTAAACTCAATTGAAACAGGAGATACAATACCAGTATCATATATCAATCAAAATAAATATATTCAACACAATTTAGCCCTAAAAGATGGAGTGAAAGGCTTTGCAGAAATTTTGAGTAAACTTCCTAAAGGAAATGCTAAAGTTGAAGTCAAAAGAGCATTTGAAGATGGAAATTATGTATTTACACATACAAAATATAATTTCTTTGGA # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGAACCAAGACATATGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //