Array 1 288023-288586 **** Predicted by CRISPRDetect 2.4 *** >NC_021284.1 Spiroplasma syrphidicola EA-1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 288023 36 100.0 30 .................................... TAATTTTTAAACTAATACCAATAGTCATAT 288089 36 100.0 30 .................................... TTCGCACATTTTAGCGTCTTCTTGTTCTTG 288155 36 100.0 30 .................................... ATAATTTGACAATTTTTATCACAACTACTA 288221 36 100.0 30 .................................... CAGTTATTGTATATCTATCTCCATAAAAAT 288287 36 100.0 30 .................................... AATTGTCTTTTAATGTCGTTTATAAATTCT 288353 36 100.0 30 .................................... TTTTTAAAATCAATATCAGTTTCACAAGCA 288419 36 100.0 30 .................................... CAATGTAGCACCATCTAGAACATTACGCCC 288485 36 100.0 30 .................................... ATCACCATACATATAACTTCCTTGTTTAAG 288551 36 86.1 0 .............................ATTT..A | ========== ====== ====== ====== ==================================== ============================== ================== 9 36 98.5 30 GTATTAGTCTTCTCCAATTTGTCAGGAAACAACAGC # Left flank : AAATGAAGTTAATGATGAACTTATTAAAAAAATTAATACCAAAGAGTTTGAATATTTAAAGGCAATTATTATGTTTTTATACTATATTTATGATTATGGAAATAACAAATTTAAAATTAAAGATGACAATTTATTGAGGCATTTAGAAAAATTTAAAAATCATGAAACTAAGAATTACTATCATTATTTTTTATTAAGAGTTAATAATTTATTTATTTCATTGTATAATTTGTTTAAAAATTATTTTTCAATAAATAGAGTTAAAATATGTGAAGAAAATATAAAAAACTATGATTCGTTAAATTTATTTAATGAATTTAAATTAAATTTAATTTATAAAAATAATCAAAATAAAATTATACTAGATCAAAATAAAATGTTAAAATATGTTTATAAAGATTTTTTTTATACTGTTTCTGACAAAAAAGCTATTAAAGAAATTTTAAAATTATTTTATGAAATCTTTAGTATTTCAGTAAAATAAGTTCTTTATTTTTGAG # Right flank : AGACAGTAATTTAAAATTATTTATTATATTTTTTCTTTACATTAAAATTAAGTTATGTTATTATTTTTATTAAGAATGTTGAGGTAGCAATGCAAAAAAATTCTATTATAAAAAAATGCAGATTTTTACAAAATAGTCATTTTACTATCAATGTTTTTAACATTCTATTATTTGCAAAAAATATTATTAATAATAAAAAAACTAGTTATTTATTTAACTAGTTTTTTTATGGTTCAGGAGGAAAAAATGGAGAAAAGTCAAAATCAAATTACCGAGCAAGGTTATGAAGTTAATGACATTAAATTATTGTTAGAACCAAACCAACGACCAAAAAACATGTGACAATGAGCAATTTTATCATTACAGCATGTTTTTGCAATGTTTGGATCAACTGTTTTAGTCCCATTAACAATTAACCAAATTGCTGGGGTTGAAGTGATGAATATTTCAATGGCCTTATTTTGTTCTGGGGTCGGAACATTAATCTATATTGTCTGTAC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAGTCTTCTCCAATTTGTCAGGAAACAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.30,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [85.0-88.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 2 1007785-1005965 **** Predicted by CRISPRDetect 2.4 *** >NC_021284.1 Spiroplasma syrphidicola EA-1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1007784 36 100.0 30 .................................... TTGATGTATATGGATCAAACAATGGTCTTA 1007718 36 100.0 30 .................................... GAAAATATAAATAATTATGTTGAAGATTTC 1007652 36 100.0 30 .................................... TGCTTATGTTGTTCCATATATTGAAAGTGG 1007586 36 100.0 30 .................................... TTATTTGATAAATATCAATTTGAAATGTTA 1007520 36 100.0 31 .................................... TCAAGCAATAGATATATAACAGGATCAACAG 1007453 36 100.0 30 .................................... ATTTAATGCCAAGTGATGTTGATGATATTA 1007387 36 100.0 30 .................................... AATCCATCCATAATAATAGCTTCATTAGGG 1007321 36 100.0 30 .................................... ACATCACATACTATACTAGCAAGTAGTTAG 1007255 36 100.0 30 .................................... TAGTTTTTCACAAGGAGGAGTAGCTTATAC 1007189 36 100.0 30 .................................... AAAATAAGTATGATAAGATAAAAGGGTCAA 1007123 36 100.0 30 .................................... TTGGAGCATTTGATTATTCAAATACTACAA 1007057 36 100.0 30 .................................... ATATTATGGATAATACTTTTAATAAAGATT 1006991 36 100.0 30 .................................... GATTCCAATGAATGAAACAACTTATGGAGA 1006925 36 100.0 30 .................................... AAAATACTGTTTATATGATTGATAAAATTG 1006859 36 100.0 31 .................................... ACGACTTAATTTTGTTAAAGTAGTAATTTCT 1006792 36 100.0 30 .................................... ATGAAAAGCTTTAACGACTTACGAAATATG 1006726 36 100.0 30 .................................... TACAGTTAGATTAAATGGTGTAATGCCAAT 1006660 36 100.0 30 .................................... TATTGATTGGTGGTGTTATTGCCACAATCG 1006594 36 100.0 30 .................................... GACGAGTTTATGGACTACTTAAAAAAAGTT 1006528 36 100.0 30 .................................... TTAGCATATGTTGATAGTGTGTTAGCTATT 1006462 36 100.0 30 .................................... TTAATCTATTGCAACTTATTAGCACACACT 1006396 36 100.0 30 .................................... CTCCTACTCATTCAGCACCACACAACAGCA 1006330 36 97.2 30 ...............T.................... AAATTTACCTTCTATACAGCAAATAAGGTC 1006264 36 100.0 30 .................................... TAACAAAAGAATACTTTAACTTCCCCGACT 1006198 36 100.0 30 .................................... AGGGGTTACCTGCCCTATCGCTACTCACTG 1006132 36 97.2 30 .....................G.............. AAACCATTAAAGCGATTAGCATTCACATTG 1006066 36 100.0 30 .................................... TGGATCATTACAAAGTTGAAAAAAACAAGA 1006000 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 28 36 99.8 30 GTTTTAGTCGGCTGTCATTTTATTGTAGAATATAAC # Left flank : AAAGCATAACTATTTTAGCTTCAAATTGCCCAATTTTATATAATTTTTTTATAGATGAATTAGAACAAGTTGTATTTTTAAAAAATAATAAAATTAATTCATTTGAATTTATAAAGTCAATAGTTGCAAAAACAATTTCTATTTATGCATTTTTAGATTCAGATAGTTGTGAATATGAAGTTTTTCTAAAAGATTTAAGTTATGTTTTAACAGACGAAGATATAGTATTTGAAAAAAATAAGTATTTAAAAAATAATATGTTTTTTATTTTGCATGCTATAAATTGTAAAAAATTATTTTTAAAAATATCCGCTATTAATTTGTTTAATATTACAAATGATATGTTTTGTTTAGAATTAAGTAAAGAAAATATAATTTTTGTCTACTTATTCTTAAAAAATTTGGATATAGAACTTATATTAGAAAATGATATAAAGATTTTTTTTGATAAATGCAATTGGCTATTTAATTAATACTTTTTTTGATATAATAAATTTGAG # Right flank : GCACTAGTATAGTTCTTTTTACTTAAAAAAATATTGTTTTTTAAAAAAATATAAAATATAATACTCTTGAAAAACTATTAAAATGAGTAGGGTTAGTCAGGAGACATAAAATGAAAAAATTACTAGTAATGTTTACTGCAGTTTCCATGATAACATCTACCTCGTCATTAGCAGTTTCTTGTGGTCCGGATCGAAATCCATATGTTTCAGAAAATAATAAAGTTGTGCTTAATAAATATAATTTTCAATTGGATGAAGACTATATTTATGCAACATTAATTTTTGGGGCCTTAGTCAATGACAATACGAATATAACAAAATTTAATGCTTTTTTTAATGATAATGATAATCATTATATTGATTATTTAAAGGTTAAAGAAGAACTACCAGTTCAAGATAAATATGATAAACGGATTTATCATTTTACAATAATTAGAGATTTAAGATACTCAGCAATAATTGATTCAGAAGTTAGTTGTACTCTTTCGTTTAATATAAAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTCGGCTGTCATTTTATTGTAGAATATAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [86.7-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //