Array 1 259977-257415 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP069495.1 Kytococcus sedentarius strain FDAARGOS_1200 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 259976 36 100.0 40 .................................... CTGCGGCCCGGCCGGTACGGGTCCGCCGAGCTGAACTTGC 259900 36 97.2 38 ..............A..................... CTCCTCGACATGGTCCGGGAACGCGCCGGGTTCGCCCG 259826 36 100.0 39 .................................... ACCGAGGAGGAGGCCCGCCGGTACGCCGACACGGTGGGC 259751 36 100.0 37 .................................... GGAACCCCGCGCACGTGTCCGCGCTCATGGCCGACAA 259678 36 100.0 38 .................................... CCGATGGACCGCTACGCGCGGGCGCTCCGCGATCCCCG 259604 36 100.0 42 .................................... CCGCGGCCATAGCGCCCCGGAACGCGGCCCACGCGGCCACAG 259526 36 100.0 38 .................................... GCCACGCAGACCCGTGCCCAGCTGACCACCGTGATGGG 259452 36 100.0 38 .................................... TTCTGCGCCATGCAGATCTCTCGTGGAGTGGTCTTCAC 259378 36 100.0 39 .................................... GCCGAGGTGGGCGAGGCGCCGCCCGTGGACGTGGACAAC 259303 36 100.0 40 .................................... GAGGGCCGCTTCCGCACGCTGCGCGCCACCCTCCCGGGCA 259227 36 100.0 40 .................................... CCGCTGCCACACACTGCCAACATGCCGCCTAGCGCGTCCA 259151 36 100.0 36 .................................... TGCATCAGGCCGCTGCCGTCGAAGCCGTAGATGTCC 259079 36 100.0 40 .................................... TCCTGCTCCTGGACGCCGGTGGTGTTCAGGATGCCCTTGG 259003 36 100.0 35 .................................... ACGATGTGCGCCGTCCTCGGGGTGCTCCACGCGAC 258932 36 100.0 38 .................................... CCGGCACCCCACTTCACGGCGCGGGCGACTTCCGGCAT 258858 36 100.0 34 .................................... TCGATGCCGCGGGGGGTCGTGTTGGGCATGGGGC 258788 36 100.0 36 .................................... CTGTGAAAGCGAACGCCGATGAGCACCGTCCGCGCC 258716 36 100.0 38 .................................... TTGAAGCCGTCCGCCCAGTTCCCGCTCGCGTCGCACCG 258642 36 100.0 39 .................................... CGGGTGGACCACGATGGGTGACCTCCGGCCCGGTGACCA 258567 36 97.2 37 ...........C........................ CTGCAAGGCGTCCGCCCCGGCACCATCGTCACCGTGG 258494 36 97.2 39 .............G...................... CGTGCAATCGCCCACACGCTCTGAGGGAGGACCGCATGA 258419 36 100.0 42 .................................... GGTGATCCCGGCCTTGGACTGTGCGGCGCGCACGGCGTCGAA 258341 36 100.0 39 .................................... GCCGTCAGCCTCACCGTGTGGTTCGGGTGGTCCGGTGGC 258266 36 100.0 40 .................................... TGGCTCCGCGTACCTTGCTCACGCTGGCGGGCCGGCGGTG 258190 36 100.0 39 .................................... GACACCTCCAGGACCGCGAACACCTGCGGCACCCGTTCA 258115 36 100.0 37 .................................... TGGGACCGTATCTGGGTGACGTGGGGCGACCGGGAGA 258042 36 100.0 37 .................................... ATCGCACGCACAACGCGCCGCTGGCTTGACCTGTACG 257969 36 100.0 33 .................................... CCGACGGCTACGGCGCCGAGGGCCGCGAGCAGC 257900 36 100.0 38 .................................... ATCACGGCGGCGGATGGGACACCCTCGCCGGTGGCGAC 257826 36 100.0 41 .................................... CCCGAGCGATACGCTTGATGCCCGGCCAGCCAGTATCCCGG 257749 36 100.0 40 .................................... ACCGACAAAATCCCCGGCCTCAAGGGACCGGCCAGCCGCG 257673 36 100.0 39 .................................... GGGCCGAACGGGGCCGGAGTCAGCAACTACGGCCGCGTG 257598 36 100.0 35 .................................... ACCCCGACGCTGGCCAACATGATGACCGAGCGCGG 257527 36 97.2 38 ..........A......................... AAGGGCACCAACGGCGATGTGCGGATGGGCGATGACAC 257453 36 97.2 0 ............................A....... | T,C,G [257417,257419,257421] ========== ====== ====== ====== ==================================== ========================================== ================== 35 36 99.6 38 CCCGCTGCTCTTCCGAGAGCAGCCCTTCGTTGAGGC # Left flank : AACTACAGGGCGATGAGGGTCCGATGAGCCGCCGCGACTCACGGCGTCACCTCATTGCCTACGACATTCCTGATGACAAGCGACGTGCGCGGGTTGCGAAGGCCCTTGGGGCGTACGGCGACCGCGTCCAGTACAGCGTCTTCGTGGTGGATGCGGCTCCCGTGCGGCTGGCACGGCTGGAACGTGAGGTCGATGCTCTCATTCATCCTGAGGCCGACTCCGTGCTCCTGTGCGACCTTGGCCCCACGGCGGGTGTCGAGGAGGACAGGTTCACGTGGATCGGCCGGCGGCGCCAGATGACGGGGCCGAGCTCTTTCATCATCTGAGCGAGACCCTTCGCAGCCCGCGAATCCGCCGCAACCCCTCGCCACGGAGAGACGTTCTGCGGCAATATTTCCCGTTTCGGGGCACTAGCTGGTGACGCAGTGCGCATCAGACGACGCCGAGCTCTCGCGCGGTGGGCCGAAACTCCCTGCGCTGCCACGCCTATCATGGGGTCA # Right flank : CGGTCAGGCGACAACACTCCCTCTGTCAGGTCACGCCGCGGGCGAAGGCACGCACCAGCAGGAAGAACGGCCACAGCACCAGCTCCACGGCGATCTCCACCAACCAGAACACGAACACCACCAGGAGCGGGATGAACAGCAGGAAGGCGAAGAAGCCCGAGAGGGGGTCGCTGCCCACCGGGGCGTGGCCCAAGACATCGGCCATGTTCTTCAACCAGCTCCCGGTCACCGGCGTCCACGGCAACCGCCACACCGACGCCGAGCGCGCCATCGTCAGACTTCTAGGGCCCGCACCACCGGCACCCCCGGCCGGTAGGGAATGTGCAGCCAGCTCGGGCCGTCCACCCGCGCCAGGTCCGCCCGCGCCCCCACACGCAACACGCCCACGTCATCGCGCCGCAGCGAGCGTGCCCCACCCACCGTGGCCGCCTGCAGTGCCTCCGCAGGCGTCATGCCCATCTCCCGCACGGCCATCGCGATCATGAACGGCATCGAGGACG # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCGCTGCTCTTCCGAGAGCAGCCCTTCGTTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.90,-7.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //