Array 1 325522-324764 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QUKJ01000003.1 Clostridium sp. TF11-13AC TF11-13AC.Scaf3, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
    325521	    28	 100.0	    33	............................	CAGGTAAAGCGCTTGACTTTGACTCAAGTAAAT	
    325460	    28	 100.0	    33	............................	CAGAATATGACCGATTTAGAAATACTATGTATT	
    325399	    28	 100.0	    31	............................	TCCCGGTGAGGTCGTCACTGTATGTAATGGC  	
    325340	    28	 100.0	    33	............................	GTACCTGGTAAGTTATTGCCAAAAAGAATACCT	
    325279	    28	 100.0	    33	............................	CTTTAATTATAACTTTGCCGTAGAGCATAGGAG	
    325218	    28	 100.0	    33	............................	TTAATGAAACGTTTTTATCTTCAATAAATTGAG	
    325157	    28	 100.0	    33	............................	CGGACGGCGGCTATTACTGGGAACGATAAAGGG	
    325096	    28	 100.0	    33	............................	CTGCTCCGGATACCTTGATTTTAAAAGGCAAAA	
    325035	    28	  96.4	    33	.......................A....	CTACGACAGGACAGAGGAGACAACGGACACACG	
    324974	    28	  96.4	    33	........T...................	TGTGGGAGACATAGATTTATACAAACAGGAGTT	
    324913	    28	  96.4	    33	......................C.....	TTCCGAGATTCTTTAACGTCTGGATATCACGGC	
    324852	    28	 100.0	    33	............................	CGAAAAACCGGAATGGTTGACGATGGATCAGAT	
    324791	    28	  85.7	     0	............T...........T.TT	|                                	
==========	======	======	======	============================	=================================	==================
        13	    28	  98.1	    33	GTATTCCCCGCGCAAGCGGGGGTGATCC	                                 	       

# Left flank :   TCATCAGATGAGATTATTGAGTTGGCGGCGATTAGAATCATTAACCACAAAATTGCAGACCAATTGGAGATTCTAGTGAAAGCAGAAAAAGGTGTTCCAAAAGTAATTACTGAACTTACGGGGATTACAGAGGAGATTCTTGAGGAAAAGGGGATGGTTCTTTCTTCAGCGATAGAGAAGTTTTGTGAATTTATTGGACAAAGTACAATAGTGGGTCATAACATCGCATTTGATCGCAGCTTTTTAAAGGAAGCTTGTCGAAAGACCAATCGTATGAATCTAAAAAATCCGGCAAAAGATACATTAGATCTTGCGAGAAGACGAATCGATGATATTGATGATTATAAGCTGCATGCACTAGCAGACTATTTCCAGATAAAAGTTGAGGAGGAACATAGGGCATTAAGTGATTGCATCACAACATTTCAGGTGTTTGAGAAACTAAATGAAATTTAGAGATGGAGATCGGGAAAAGGTTGTAAATAAGGGATTTTTTTAGT
# Right flank :  TCCTAAAATCTAAAGTTTGGGAAGATAAGAACAACCTTATGATTTCAACATATGAAGCCATAAGGTTGTTTTTTCGTATAGAAAACTTCACTGCTGCATCTTGAAGGTCACCAGAATTTGTGGGAAATGATAGGTGGTTGTTTGCTCAGTTTTTTGAAATATAGATGATTTTATCACAGGTGTAAAGTTCTTCCCCCCTCTGTTTCGCGTTTCATATCCGATATATTTACAATTCCCATCCAACTGACTATAATAAAGAATGCCCGTTTGTCTGCAAAGGCGCGGAACCATATCCATCTGCATCAGGGCGATATGACAGAAAAATGAACTTAAAAGAATGGAAGAAAGAACAATGGATGTAATTGAAAAATTTGGAAATAGGGTGAGCAGCCAGGCGCTTAAGGATCCGGAAAAAGCGCGTCGGCTGCTTCTTGCGGGATACCGCCTGCAGGAAAAGAAGCTTCAGTTTTTGCCGGATCGGGGACTGCCGTCGTCGGGAC

# Questionable array : NO	 Score: 6.16
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTATTCCCCGCGCAAGCGGGGGTGATCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched CTGTTCCCCGCGCAGGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.20,-13.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [6-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.28   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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