Array 1 2658065-2658816 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP038033.1 Nitrosococcus wardiae strain D1FHS chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	=====================================	====================================	==================
   2658065	    37	 100.0	    34	.....................................	TTTCATGCTCATCGCGCTAACTCCTCTGTTGTTT  	
   2658136	    37	 100.0	    35	.....................................	CGCCATGTCAAGCGCGAGCAATCCCCGGTGGATTC 	
   2658208	    37	 100.0	    35	.....................................	CATTTGGAGCCGTTCTTTTGATACCAATTCTCGAG 	
   2658280	    37	 100.0	    34	.....................................	CTCCTCCAGGCGGGCCACGCGCCCCAAGGCCCCG  	
   2658351	    37	 100.0	    34	.....................................	TTGAACCTGCTCCTCATAGCCTGGCCAGCGGTTG  	
   2658422	    37	 100.0	    34	.....................................	AAGTCTAACCGAGCGGGGATCGAGGGGGCGAAAG  	
   2658493	    37	 100.0	    34	.....................................	CAATCAGTTCATCAACCCAAGGCAAAGGATTATC  	
   2658564	    37	 100.0	    34	.....................................	TATGATGGCATTCCCATTACCACTTCAGGTAGTG  	
   2658635	    37	 100.0	    36	.....................................	CTATTGTGTTGTTGGCTTACCCGCCAAACGCTCGCC	
   2658708	    37	 100.0	    35	.....................................	GCTGATAACATCAGCAAGACGCTGCAAACCTAAAC 	
   2658780	    37	  91.9	     0	.............................G.C....A	|                                   	
==========	======	======	======	=====================================	====================================	==================
        11	    37	  99.3	    35	GCATCACCCGTCCTTCGGGACGGGTGTGGATTGAAAC	                                    	       

# Left flank :   CCTTTTCTAACCCGTTAAGGAAAATACAAGCTGTGTTAATTCTCGTGACTTATGACGTTTCCACAGAAACCCCTGCCGGCCGTCGGCGATTACGGCAAGTGGCCAAAGCCTGCTTGAATTATGGGCAAAGGGTACAAAAATCGGTATTTGAATGTAAGGTTGATCAGGCTGGTTTAGAGGCGCTACAGCGTTATTTGTTGAAAATTATTTGCGAAGAGGAAGATAGCCTTCGCATTTATCGTTTAACTGAACCACTGGAACGCAATGTCCAAGAGTTCGGTAAATTTCGTGCAGTAGATTTTGAGGCTCCGCTGATCGTATAACGCGAACCCTAAGTGGGCAATGAAAGGCTAGGAGGTTCGCGTATTATGTATGTCATTGAAATGCAATGGATGAATGTATCTATAGTTGCACATTTATGGGGTAAAGTGGATCAAAAAAGACCAGATCGCGCTATGCGTTTTGTGGAACCTGCAATATCATTATCTTGCGGCAATGCT
# Right flank :  AATTAAAGGACACCCATTTAATTTGTTTGCGGATGTTTACAGTTACGAATCCCTATAAAGCTTAAGGCTGAAAGAGGCATTTCTTTTGAGGAGATCGTCTTCTATATAGAGCGGGGTGATGAAGTGGATATCTTAGAGCACCCCAACCAGGAGAAATATCCAGGTCAAAAGATTTCTGTGGTGGTGGTTGAGGAATACGCATACCTTGTTCCTTATGTAGAAACGGAGGAGACGGTGAATGCTTGAACCTGCCTCTGCCGGCCTGTTGAAGGGAATGAACCCGCGGGTGACGTTTCTTGGATAACCCTGTTGTTTGCTGGGGGCACCGGGGTCGGGATCCTTTTCTGGGCGGTCGCTCAAGTCCTCCTTCAACCGGGATACTGCCGGATTGTACCCGGCGCTCTTTTCCCCTGCGTAAGAGGGGGGCGGCAGCCAAAGTAAGTCAAAACGGCCTGCGCGAATCCAGTCGGCTTGTGCCCGGACGATCTCGTACCACCGCT

# Questionable array : NO	 Score: 6.22
# 	Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GCATCACCCGTCCTTCGGGACGGGTGTGGATTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     R [7,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-15.70,-14.60] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [53.3-65.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0.64   Confidence: HIGH] 

# Array family : NA
//