Array 1 71816-73701 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGIO010000008.1 Lacticaseibacillus rhamnosus strain RAB2019A NODE_8_length_182147_cov_154.551956, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 71816 36 100.0 30 .................................... TCATACACCACTGTTCAGTATTTACACTCG 71882 36 100.0 30 .................................... AACATCTTTTTTGTGTGCGGAAACATAGTC 71948 36 100.0 30 .................................... ACAATTACCCCAGATTGACCCAAAACGTCT 72014 36 100.0 30 .................................... TGTGTCGATGAGTTGGCTGCAGGCGATTGC 72080 36 100.0 30 .................................... GTTTCAATTGATTTGGATATAAATTTGTTT 72146 36 100.0 30 .................................... TTGAATAGTGTTATTCAGGGTATGCAAGAC 72212 36 100.0 30 .................................... AACTGTTGATACTCTTGAATATAAAGGGGT 72278 36 100.0 30 .................................... CTGATTCGCAAAATCCCGGGCGTGGGCTGA 72344 36 100.0 30 .................................... TGGCTGGCAAATTGTTGGAGATGCTTTTGC 72410 36 100.0 30 .................................... GGGTTATGGGGCGTTAAGCCCATTGATTTA 72476 36 97.2 30 ...................A................ CAAAAATGTCAATGTGTCGATGACCTGGCT 72542 36 100.0 30 .................................... TTTGGCTACAAGCATGACCCAACGGCAGGG 72608 36 97.2 30 ........C........................... GTGTCCAACTTAATATCTGACCACTTAATA 72674 36 100.0 30 .................................... TGTCTCCCACGGAAAAGTGGCACCTAAAAA 72740 36 100.0 30 .................................... TCTTCTGCCATATCCTGACCCCCTTAAAGA 72806 36 100.0 30 .................................... CATAAAAGTGATTAGTGTCGATTGGCGTGC 72872 36 100.0 30 .................................... ATGCTGGTGATGACACCGACAACCAGAAGG 72938 36 100.0 30 .................................... GTCGTTTAAGTTGTTTCGTCGCTCTGAGTT 73004 36 100.0 30 .................................... ACGATGAAGAAACAGAAGAACTTGACGGCG 73070 36 100.0 30 .................................... CGATTATTGCGCCAATCACCACTGGGTTCA 73136 36 100.0 30 .................................... GTCGTTTAAGTTGTTTCGTCGCTCTGAGTT 73202 36 100.0 30 .................................... GCCAATTGAATAGGCCAGACAAAAATTGCC 73268 36 100.0 30 .................................... TGTATTTTGTACCCCCGTGTTACTTGACGG 73334 36 100.0 30 .................................... GACTTGGCGGATCTCGTTGTGCTTATTGCG 73400 36 100.0 30 .................................... TGATGGTTTTGCCGTCCGGCTTGACAATCC 73466 36 100.0 30 .................................... ATTTCGGCGATGGCCGTCTATCTAAAGATA 73532 36 100.0 30 .................................... GGCCAGCGACTGGGTGCAACAATTACTGTT 73598 36 100.0 30 .................................... CTTAGAATAGCTTTATTGATTTGGTTATTT 73664 36 83.3 0 ....T..................AA.C....T...A | C,G [73690,73696] ========== ====== ====== ====== ==================================== ============================== ================== 29 36 99.2 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Left flank : GAGATGGATTTGGACAAGTTATTTCAACGCTTGATCATCAAGAAGGTAAGCCAATTGATAGAGGATCAGCGGCTGATTGAGTTGATTGAGCAGTCACAACGACTGGCAATGAGCTTATTGAGAGAGCCGTTGTTAAGTGAACTTCCAGTCACAGTCGAACCTGGTGGAAAACTTGAACAAATCATGAAATACTGTAATGTTCATTTTGATGAAGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTCAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTACCAACATCAGTCATTATTTAGATGTTGATAGTTTAAACAAGCTGTTAGATCAGGTTAAGGACACATCGTTAGAATTACTTCTCATTGAATTTTCAGATGTCGAACGTGGAAAGTTTTTTGAGAAATGCCAGTATATCTATATTGACAAAGATTTCATGGATAACCGTGAACTGATTGATTAAGAGACTGTGTGAAAACACCG # Right flank : ACCTCACCCCATAAATGCTATGCAAATCCCAAAAGAAGGCAACAGCATTGTCAAAAGCAAAACTAATCCTTTCCCCAGCCTTTTACACTGATCTCAAAGAAATCCGTCACATGTACCAACAGGCGTTCAAATCACTTTACGGCAAATATCAAGATCGGGAAACCAATCCCTACTGTGAATCGTTGGAAAGCTTACAGAAAAAGTTCAAACGGCCTAACAATGCCTTCTTCTTTATAATCGTTAAAGATAAACACATAGGCCTGATTCGCGTTGTAACAGATCGCAAAAATTCGGCAGCCCGTATTTCACCATTTTTAATCTTGCCGTCTTATCAAGGAAAGGGATACGCTCAGCTCGGACTACAGTTGATTGAAGAACAGTTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCCAAGTTGGTACATTTGTATCGCAAAGTCGGTTTTCAGCAGCTACCAGATCGGGAAACGACGATTAATGAGCAT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //