Array 1 37487-38261 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NJOC01000010.1 Bifidobacterium breve strain W20-13 scaffold56, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	=================================	====================================	==================
     37487	    33	 100.0	    34	.................................	CGTGACGAAATCGGCCAGAACATCGCGAAGGGGT  	
     37554	    33	 100.0	    35	.................................	AAACCGGGACGCAACCTCACCGCATGGCAGGCCGT 	
     37622	    33	 100.0	    33	.................................	TACGCGTCAATGTACGGCAAAGGCGACGTGTAT   	
     37688	    33	  97.0	    34	...................A.............	TCGTCAAGCAGGGTCTTCAAAATCACACCCGGAT  	
     37755	    33	 100.0	    33	.................................	CTTTCATCTGATTGGAACGACGCTTCCGATTCT   	
     37821	    33	  97.0	    35	.....................A...........	AGGTACAGCCAGTTGAACACGGCTCCCATCCCGTT 	
     37889	    33	 100.0	    35	.................................	ATGGCCGTCAACAACGGTTCCGCGTTGGCGCTGGC 	
     37957	    33	 100.0	    34	.................................	AGTGCTTTCCTGTCCTTGTCAGCAGGCATCGGAC  	
     38024	    33	 100.0	    35	.................................	TGGCTCGCCCACAACTGGTACTAAGGAGAGGGACA 	
     38092	    33	  97.0	    35	............T....................	CTGTACGGCAAGGCTCAGACCGGCATTGAGGGCTG 	
     38160	    33	 100.0	    36	.................................	CAAGCCCCCATACCCCGCGCAGCCCTCAAATCCAGC	
     38229	    33	  81.8	     0	.............T...A.......G..CCT..	|                                   	
==========	======	======	======	=================================	====================================	==================
        12	    33	  97.7	    35	GTCGCTCCCCATCCGGGGAGCGTGGATTGAAAT	                                    	       

# Left flank :   TCCGGCGATTTGGAACTGGTCGAAGGCGAGTACGAGCTCATCAACCGTGTGGAGGAGGAGAATGCCGCCGAGGCCGCTGCTTCGGTGTCCGCCGCTCTGCCGACCGGTGGCTTCGTGATCCTCGACACCGCTCTGGATGACGACCTGCTGGCTGAAGGCTACGCCCGCGACGCCATCCGCGTCGTGCAGGACGCCCGCAAGGCCGCCGATCTGGACATCGCCGATCGCATCTCCCTGGTGCTGACCGTGCCGGCTGTTGATGTGGCCAAGGTCGAGCAATTCCGCAATCTGATCGCCCATGAGACGCTGGCTACCTCCTTCGAAGTGAAGGAAGGCACCGAGCTGGCCGTTGAGGTCGCCAAGGCATGAGATCGCTGAATTGAGTTTGCTGAGTTGTCAATATTGAACGTTGGGACAGCCCAGTAAACTCGATACGCCAATTGATATGAGCTTGTCGTTGTGGTTGGGATTGTGTGGATTCCAGCCACAACGACAAGTTT
# Right flank :  TGCCGGATTAATACGTTGGTTGATGTCGGTATCGTCCCATCTATCCTTGATATAAGGATTTGTGATGGGGGTAACGATATCAGCTTGGTTCCACTGGTCAACGTATGAGTATCGGATACGGTTCGGTGCGTATGTTTCGATCATTCGCTGATAGTAATCGCGTTCATTAAGAAGCAGGTCCACCAGATATCCGGGTTCGTTTGGGAAATTCTTTAGTGCGCGAGTATAAAGATTGTGGTGTTCGTCCAATACCAGAGCTGGAACGGAATCTAAGCGCAAGAGTTCTTTAAACATGACGAGCCGCCCAATTCGACCGTTACCGTCGGAGAATGGGTGCGTGGATTCGAACATCCAATGTGCTTTTGCGATTGCAAAAGAATCATCTTCCAATTGTGAGTACAAGCTGAATACCTGTTTCATGGCAAGAGGCACATCCGCGGGGAGTACCGTATGAATTCCCTCAAGTTGGCTGATGACGTTGGGCACTATTTTGTATCCGC

# Questionable array : NO	 Score: 9.15
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCTCCCCATCCGGGGAGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     R [6,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTCGCTCCCCATCCGGGGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-8.50,-8.40] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [1-7] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [55.0-58.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9.41,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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