Array 1 1684363-1684601 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP084703.1 Bacillus shivajii strain JCM 32183 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =================================== ================== 1684363 29 100.0 28 ............................. ACGACGAGCAATACTTCTTCGAACTACT 1684420 29 100.0 28 ............................. ACGACGAGCAATACTTCTTCGAACTACT 1684477 29 100.0 35 ............................. CTGTTTATCTGTGACGAGTAATCGCAGGAACACTG 1684541 29 89.7 3 .TT.T........................ CTC 1684573 29 69.0 0 .TT.C..........C..G..T..TG..G | ========== ====== ====== ====== ============================= =================================== ================== 5 29 91.7 24 TCGAGCTGCGACGAGTAACCGCAGGAGCA # Left flank : ATAGCTGGTTTCCCTTCTAAAAAACTACGCGTTCTTTTCCACTTTTGTGTAATGATCTCCACAACTGATATTAATGTTCCCCATAAAGAAACGGCGTATAAAACGTAATGAACACCTATTTCTTTATCGTAAATGGCATTACCGACAAGTTCTCCTAATACTAACGCAGAGATAAAGTCAAAAGGTGTTAGCTGTGAAATTTGTGTTTTTCCTAAAATTTTCGTCAATATAAGTAAGGCAATAAATCCGATTAGAAGTTCGATCGATAAGGCTGCAAAATTCGTATTCAAAGGTAACCCACCTTTTGTTAACATTTCCTTATATTAAGATGGACATTTTTGGATACGTTTATGAATTGAATCAATTTCATAATTACTTTTTTGCGGAGTGAAACGAATGATATTATAAATATTTCAATATACGTTTTATTTGGGAGTGAACGTAACAAAAGACGGCGACTCCCAGAGGATCAGCGACGAGCAATACTTCTTCGAACTGCT # Right flank : GCAGGAGCAACGAGCTGAAGATCCACTTAGGCGAAGAGTTGTCGAGCCTAAGGAAAGCGTCCGTCTGAAGTGAAGTTCACGCTCATCATTTGGTATTTCGCATCTTATTTTGAGTTATCAAATTGATTCAATTATCAAAGATGTGTTGTAAATGATCGTTTAATCTTTTTGTAAGTTGTTTAGATGCATAAATTACTTTTGCTGACTCTGACTGAGGATCATCTTCACTGCCACGAAAAACAGTACGGACATTTTCATCCTTTGTTAACCAATATTTCTGTAAATAAGACTGATACTCTCTCCAGAACGCATCAATTGCTTGTATTTGATTCTCGTTGTACACAACAAAAAGTTCATCGTTTGTTACGGACAACCTCTTTGGAGATAGTTCAATTTCTTTTTTATGTAATTGATGAGTTTGTTTCTGTACGGCATTCCTTACTTGCATACATTGAAGTTCAACTGTTCTTTGCACCTCTTCTTGCCAACTAGTTGTATCT # Questionable array : NO Score: 2.53 # Score Detail : 1:0, 2:0, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCGAGCTGCGACGAGTAACCGCAGGAGCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.60,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 2974334-2974478 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP084703.1 Bacillus shivajii strain JCM 32183 chromosome, complete genome Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ======================================== ================== 2974334 24 100.0 40 ........................ ATAAACAGTGTTCCTGCGATTACTCGTCACAGATAAACAG 2974398 24 100.0 33 ........................ CTCGAAGCAGTTCGAAGAAGTATTGCTCGTCGT 2974455 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ======================================== ================== 3 24 100.0 37 TGCTCCTGCGGTTACTCGTCGCAG # Left flank : AGGTTTTCATAATCTTCAAGATCACCGCTTGAGTTTTCATCAGAGCACGCTGCAATCATTAATATGAAGATCAAAGCAATTGGGAAATGCACCGTTTTCAACATAATAAACTCCTTTAGTTTATTTATCATTCATTCGTTCCCTTTCATCATACTTAAAATACAGTCTTGCAAAATTTTTATATTTATAAAAGCGAGTTTATTTTATCACTTTTTTCCATAACTTGAAAAGGGGGAAAAAATAAGTGTTTATGTCGGAATATGTACTCGGCGATTACCGAGCCTATAGGCATTGAAAGAAACGCAGCTAAACTTATATTATACACATCTGAATTTTCACTACGTCCGGTTTTACTACTTGAATCAATTTCACAACTCAAAATATGATGCGATATTCCGAATGATTAGTGTGAACTTCACTTCAGACGGGCGCTTTCCCGAGGGCTTGTCTTTAGCTAACTTAGGCTCGACAACTCTCGTCTAAGTGGATCTTCAGCTCGT # Right flank : GCTCGAAGCAGTTCGAAGAAGTATTGCTCGTCGCTGATCCTCCGAGAGTCGCCGTCTTTTGTAAAGTTCACTTTCAAATAAAACGTACATTTTTGACCTTGTTACTATGGGTTATAACAGAATGAAACTGGCAAGCACACGATTCACTCAGCAATTGAATACGAATGTAGCAGCTTAAAATAAAAACTGCTTTATAAAAGATTGTTTCTTTAAATACAAATGAACAGGATAATAGAGTCTAGAAGCAGTAGAAATACACGTAGACTCATGCGGGAAGAGCGCGAGCTGAAGATCCACTGTGGAAAGAGATAGTTTTCTTTCCACAGTTAGCTGAAGCCGTGCCCGCGGAAAGCGAAGTGTATTTCAACTGCGATCCAAATAAAAATGCAAATTTTTAAAATGTAACTGAAACAAATTCTGAAGCCGTCATCAATTTTTAAAAGATGCATTATGAAATTGGCTCACTTAGCTAAAATTATATAAATTCTTAAAGTAAAGGC # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGCTCCTGCGGTTACTCGTCGCAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA //