Array 1 384830-384435 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QDEF01000004.1 Mycobacteroides abscessus strain A73 A73_4, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                   	Insertion/Deletion
==========	======	======	======	============================	==================================	==================
    384829	    28	  92.9	    29	........................AA..	TGGTCGCTCGGCCCGGCCGTGCGCGATGC     	
    384768	    28	  89.3	    33	................T.......AA..	GCATCTCGGTGATCTGCACCGTCGACGCCGTGA 	
    384707	    28	  89.3	    32	.............CT...........T.	CCGGTCCAGGTACCGCGTCCAGAAGATGCGGT  	AA [384683]
    384646	    28	  89.3	    34	............T...........AA..	GGAGCACCTGGCGCTTCACGTTCACGAGGACGAG	
    384584	    28	  96.4	    33	........................A...	GTCGGTGTGGAACCGGCAGAGCCACAATGCCAC 	
    384521	    28	 100.0	    33	............................	CGGCCGCTGGCTCCGGCACCCGGAAGCCGAGCC 	
    384460	    26	  60.7	     0	--...G...C....GCG...ATC.A...	|                                 	
==========	======	======	======	============================	==================================	==================
         7	    28	  88.3	    32	CTGCTCCCCGCGCAAGCGGGGATGCCCC	                                  	       

# Left flank :   TGCTCTCGACGGCAGCCTCGGCGCCCGCGACCGTCGCGCTCGACGTTGCGGGGACCGCGACCGGCTGCCCGGCTACGCCCGTCGAGCAGCCCGACAGCGCCACCGTGGCAGCCGCCGCGGCGGCGATCGCGAACCCGGCCTTCCTGCTCATGCGTTCGATCATCCCAGACTTGACCAAACGAACCGCCGAGACCGGTGTCACGTCCCCCGTCCGGATGTCTTGAGCGGGAGGCTGATTCATCGGCTCGCCACGTCTGCGAGGCGCTGCTCCACGGCGCGGAGGTCGGCCACCGCAGCGGTGAGGTTGGTCTGTTCCATGAGCTCGATCACGCTGTGCAGCCGGGTGCGGGCGCTGTTCACGTCGCAGTGCACTCCGCGGTGCAGGTTCGTGATCGAGTGGCGGTAGTCGGTACCCATGACCGCACGGTGACACGACTCGGGACGGGGTGGTCTACGAGGCGCGGGTACGAGGTGCGCAGTATAGTCCCAGGTCAGTAAGT
# Right flank :  CCGCTGCCCCCGCAGCGGGGGCGAAGCCGCCCCATTCTCTGTTTTAGAGAACATCTGCGCAGGTAGACGCGGTGCGGGGTTGGCGCGTCCTACTGGCGCGTGTTGGCCGCACGTGGCATGATCTTGATACCGGGTTCGCCCGGCCACCCGCACCGGTTCGCCGGTGCCCTACCCCCCGACCGCTCAGCGGATGCCCCGGGGGACTGGTGTGTCTGCACCGCGGTCGGCCGACCGAAAGGCCTTGACCGGTGACCACTACCACCATCACCACGCCACTGATCGTCGACGGTGTTCCCGTCCTCGAAGTCCCGCCGCGCACCGCCGCGGTGATGAAGTCCGTGTCTGAGCGCTCGATCCTGCGCTGGATCGCCGAGGGGAAGCTGCCCGCGCGCCGTCTCCCCGGCGGTCGCCAGCTCCGCATCGCCGTGGCCGACCTGACCGCGCTCGGCGAGCCCGTCTGACCTACCCCCGACACGCAAAAGGGCCGGCCATCGGCCAGC

# Questionable array : NO	 Score: 3.51
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.41, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.34,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTGCTCCCCGCGCAAGCGGGGATGCCCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [3,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGCTCCCCGCGCAAGCGGGGATGATCC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.00,-13.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [10-13] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [33.3-38.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.41,4.87   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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