Array 1 108913-109342 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAALYP010000007.1 Agrobacterium tumefaciens strain NCPPB 2655 NCPPB_2655_10, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                   	Insertion/Deletion
==========	======	======	======	=================================	==================================	==================
    108913	    33	  97.0	    33	A................................	CTTGCGTTGTTGGCGACCTGCCCGATCGTGACA 	
    108979	    33	  97.0	    34	T................................	TCGCGAAAGGCCATTTAGGGCAGTCGTCGTGCAT	
    109046	    33	 100.0	    33	.................................	ACGGCGTCAAGGCCACGCTCCATGGCCTCTGAT 	
    109112	    33	  93.9	    34	T........T.......................	AGCGGCCAAATCGAGAGCGGCCACAAGCGTCAGA	
    109179	    33	  97.0	    33	C................................	TTGAACTGCACCACGATGATCTTTTCGGCACAT 	
    109245	    33	  84.8	    32	........TA.....A.G......A........	CGCCTGGGCGTCGTCAACAACGTCATCCAGAC  	
    109310	    32	  75.8	     0	.C.G........-.......GC...GC.A....	|                                 	T [109318]
==========	======	======	======	=================================	==================================	==================
         7	    33	  92.2	    33	GGTCGCCTCCTTCGCGGAGGCGTGGATTGAAAC	                                  	       

# Left flank :   CCCCTACAAGCAGGCCTATGAGCGCGGCGTGAAGTTGATCGGCGCAACGGCGCACTATGTCACCGCCGATCTCGACGAAGGCCCGATCATCGAACAGGACACGGTGCGCATCACCCACGCGCAATCGGCCGAAGACTATGTCTCGCTTGGCCGCGACGTGGAAAGCCAGGTGCTGGCCCGCGCCATCCACGCCCACATCCACCACCGCACCTTCATCAACGGTAACCGCACCGTGGTCTTCCCGCCAAGCCCTGGAAGTTATGCTTCGGAACGGATGGGATAAGCCCCGAGACCAGCCAGAGAGCCCGTGATCAGGGATTTGGCGCGAACCACAAGCGTGCTATCGTCCCCCGGCGGGTTCGCACCGGCCGCCGCTCTTTGAAATCGCAGCGATTTTTTGTAATCAGACCCTGCCAGCCCCGCAGGCTCTTCCCTCGCGCATCGCCGTTCGCGCAATCCGCGTTTTTTCCGCAGTCAATTCCGGGGCTTCAGACTCCGGC
# Right flank :  CAGGGCATAGGTCAATTGATGGGCCGCCTGAATATGTCGCCCCCGGGGCGAGGATTGAAACGCCGCAGCACCCGCCAAACAGGAAGGCACAAAGCCCCTCACCTCACCCCACCAAACACCACCCGCGCCCTCAACCCGCGCGCGCCCACACCATCCTCCAGCGTCAGCCGCCCGCCGAACAGCCCGGCGATCTCCTCGATGATCGCAAGGCCGAGGCCGGCGCCGGGGGCGGCGTTGGCTTCGCCTCGGGCGAAGCGCTGGCGCACCATGGCGCGTTTTTCCGGTGGGATGCCGGGGCCGTTATCTTCCACTTCCAGCCAGACCGTGCCCGTCTCCCTGCCGACACGCACGGTGACTTCCGCGCCGCGCCCGGCATAGTTGATGGCGTTGGAAACAAGGTTGCCGATCAACTCGCCGATCAGGAGCGGCTCGGCGAGAATGGTCGCCTCGCCCTCGCCTTCGAAACCGAGGTCAATGCCAGCGTCAGCCGCGCGCGGCAC

# Questionable array : NO	 Score: 6.71
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.61, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.34,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GGTCGCCTCCTTCGCGGAGGCGTGGATTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     R [5,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched CGTCGCCTCCCTCGCGGAGGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-7.10,-5.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-15] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [40.0-41.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9.78,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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