Array 1 23-1210 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFHPC010000308.1 Escherichia coli strain sc17225761 NODE_376_length_58412_cov_3.35308, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 23 29 100.0 32 ............................. GTGAACGTGACAACGCCCGCGACAGAAACGTC 84 29 100.0 32 ............................. GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC 145 29 100.0 32 ............................. AAATTAATTTCGAAACGGGCGTTGATGGTGAA 206 29 100.0 32 ............................. GCTGGCGCACCTTACGCAAAAATAGACGTAAA 267 29 100.0 32 ............................. CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG 328 29 100.0 32 ............................. GGGTTCTATTTCCTCGGGATTTGCCGACACGC 389 29 100.0 32 ............................. GTCAACGCTGGTCAGGCGTGGTACTTCCTCCG 450 29 100.0 32 ............................. GCTGCCGCGCTTTCGGTGTGGGAGCAGTATGA 511 29 100.0 32 ............................. AAACTCCGTGGTGTAGTGCGTTTGTTGGTGCG 572 29 100.0 32 ............................. TTGGTATTAACGGGAATGTAGTCACTCCAGGA 633 29 100.0 32 ............................. GCGATCGTATTTTCCGCTACGTCGCTCAAATG 694 29 100.0 32 ............................. ACGACTGAATCCGGCGAGGCTATCAACTGGCC 755 29 100.0 32 ............................. CCGCACACGTCGAGCTGGTGGGGATTAATGCT 816 29 100.0 32 ............................. CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA 877 29 96.6 32 ............................C TCTGTGTATTCGCTACCAGCCAGCACCGGTAC 938 29 100.0 32 ............................. CAGGGTAACTGGCTGCTCCTCAACCATTCCGC 999 29 96.6 32 ........C.................... GGGTTTTAGCGACCGGACCAGAGTACGCAACA 1060 29 96.6 32 ........C.................... TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT 1121 29 96.6 32 ........C.................... GGAGTGATGAATTGGAAGTAACGGATAACCGC 1182 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 20 29 99.3 32 GTGTTCCCTGCGCCAGCGGGGATAAACCG # Left flank : GTGTAGTGCGTTTGTTGGTGCGG # Right flank : GGACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.30,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [16.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //