Array 1 434434-434931 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP061715.1 Pediococcus acidilactici strain HN9 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    434434	    36	 100.0	    30	....................................	GTGAGATTGTTGGAAAAGATTTTGTCGGAT	
    434500	    36	 100.0	    30	....................................	TACTATGAAAAAATGGGCGATGACTCAGCA	
    434566	    36	 100.0	    30	....................................	GAAAGCTTATTAAAGCAAGTGAGTTAGTAA	
    434632	    36	 100.0	    30	....................................	AGGTTGACGTTTCTAAAATCACAACGTATA	
    434698	    36	 100.0	    30	....................................	GACGTTCAAGAAACAAGCCGATAAGCAAGG	
    434764	    36	  94.4	    30	.............A......T...............	TTTTACTCACTCCAATTGAAATGAGTGTTA	
    434830	    36	  94.4	    30	................................A..T	TTTCTTCTCTGCTGGTTTTCTGCTAATTTC	
    434896	    36	  97.2	     0	............C.......................	|                             	
==========	======	======	======	====================================	==============================	==================
         8	    36	  98.2	    30	GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC	                              	       

# Left flank :   CCAGGACTTAGTTATTCAAAAGTATTTAACTAAGATTGAACGGGTTTTTGCCGAAGGGTTGGTGGATGAGCAACGTAACCAAATTCATGATCAGGTAAACCAACTATTTAATACGGTTGCTGAACAATTATTTATGCTAGATTTACCGATTAGCGTCAATTATGATTTTGATTTGAAAAAGTTATTGAAGTATTGTGGAGTGCACTTTGATCCGCTAAGCGTGGGTAACCCGTATGGTATAATTGAAGCGATTTTGAAGATTCACGAGGAGTGCGCGATTAATTCGTGTGTTGTGTTAACTAATGTTGCGCATTATTTAACGGCAAACCAAATTGAAGAACTTACCCAGCTAGTAAGTCAAACGAATCAAGCACTCTTACTAATTGAATTCACAGAAATAGGCAATCAGGAGGCCTATGGAAATAGCGAATTCTACTACATTGACAATGACTTTGTTGATTGGCATCGATAATTGATGAAATTTTAGTTAGAAAATAACG
# Right flank :  CTGACTGAAATTAATAAGAGTTAACGTTTTAAGGAAGTTATCAATAGTATTAGAAGTGTACTTTGAAGAATGGAATTTTGATGAAACTACTAGTTACGGAGAATGATAAACTACTAAGGTCCAAATGAATTTATAGGTTTAGCATCATTACTCGAAGACGATGTTTTAGTGGTGGTTGGAAATAAAATCCGCCCGAAACGATCGGGTGGTTTTCAGTTTGTAAAAGTATACCAATATATTGATATAGTAAATGCATAAAGTTAAGAAAGTGATAAAAATTGGATGATGAAGAATAAAAAAGGTATCGCAATAAGCAAATGACAATAGTGACACTAATCATTCAGACGATTACAGCTATTGTACAACTCATCACAATGCTTAAAAAATAGGTAAGAGAAGGCGATACGCCTTTCTTCTGTTCATCAATTTTAAAATGGAGGCATTAAAATGAAAAACATAGGAAAGCTACAATATTTAACTTTGACTATCAGTATCGTTGC

# Questionable array : NO	 Score: 6.17
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-1.10,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.78,0   Confidence: HIGH] 

# Array family : NA
//