Array 1 1611-3241 **** Predicted by CRISPRDetect 2.4 *** >NZ_LAXS01000006.1 Legionella pneumophila strain ATCC 43130 Scaffold3_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 1611 37 100.0 36 ..................................... GGGGATACCAACGATCTAGAATTTTTTGTACTTTAA 1684 37 100.0 36 ..................................... CACCATAGATGTTACGTTAGATCAAAGTCATTTAGG 1757 37 100.0 35 ..................................... AAAAGCTTGGGTCTGGCAACTTGGCGAGCAGTATG 1829 37 100.0 35 ..................................... TAGTAATACATCCGGCCCATTATGTCACAAATAAT 1901 37 100.0 36 ..................................... GTTTGTCACTCGCGGCACTCCTTCATTGTCGTAGTT 1974 37 100.0 35 ..................................... TTACATCTAAGGCAGTCTACCCCAGTACACGGTGA 2046 37 100.0 36 ..................................... CACTAGTTATGATTGACTTAATAGATAGTTGTATAA 2119 37 100.0 35 ..................................... TGTCTGTAAATTGGGTAAAAAAGTCTTGTATTGTT 2191 37 100.0 37 ..................................... TCTAAATTCGACAAAAATAACAAAAAACAAATTTGGA 2265 37 100.0 35 ..................................... AAAATTGTGTTCCGCTGCTCGACAAAATTATTTAA 2337 37 100.0 34 ..................................... GGTAAGTAAAAGGTGAATTAATACCATAAATGCA 2408 37 100.0 34 ..................................... TGGGACTGTCCATCCATAATCAATTGGGCCAATT 2479 37 100.0 37 ..................................... TTCTACCGATATTTCCCACTATACCTATATCATAAAG 2553 37 100.0 35 ..................................... TTCGAAATTAGTGTATTAGTCATAGCTAATAGTGT 2625 37 100.0 37 ..................................... GACTTAGTAGAAGAGGAAACTAGAGGAAAAACTAAAT 2699 37 100.0 33 ..................................... CACTTAGAACATAGCTTTGATTCTGTTGGTGTG 2769 37 100.0 34 ..................................... AGACATGCTAATCCTTTTAGGCCATATCAATGCC 2840 37 100.0 36 ..................................... ACAAAACTAGTCAAATGCCCCGCACCAGACATGGCA 2913 37 100.0 36 ..................................... TTTTTATATAATAATCCTATTCTGCTAGGTTTAATT 2986 37 100.0 37 ..................................... ATCCTGTAATATTGTCGAATACGTAATTAATCTCAGG 3060 37 100.0 36 ..................................... ACTTAGCCTCAATTCCCAAACCTCTGTGGCCGATAC 3133 37 100.0 35 ..................................... ACTTTATTAGATATGACTAATATATTAATAGCCAA 3205 37 81.1 0 ....A......C...........TT...T.A.....T | ========== ====== ====== ====== ===================================== ===================================== ================== 23 37 99.2 36 CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Left flank : TCCTTTGCATCAAAAATTAGTTTAGGTCAAAAGATGCAACTGACCGCATATGGAATGCTTTCTGAATTGATTTTTGAAAAATCATGTACCCGAGGCTATATTATTACTGGTGAAAAAGCCAAAGCCAAATTAATAAAAATTGACGAAAAATCAAAGTTCAAAGTGCTTGAAATTTATGCTAAAATAAAGAAGATTTTTGACACAGAAACATTACCATACAGCACTGCTAATGGACTTCAATGCATTCAGTGTGAGTTTCTAAATCACTGTAACGATAGATTTTAAAATCGTTATATGCTCGCTATTAATACGAGCATAGAAAAACGATTCAATCTTTAATTTTGTTGATTTCAGGGTATCGAAATTTAGATGATTTCTAATTCAAGTATTGCCTTTTTTTTCGAAAAATCAAGTCTAAATAATGCAATTTGCTATTTTTCGAAGAAAACCACTTTTAATTCCTCGTGTTTCTTTAAAATAAACAAAGAGTTAAAATTGCT # Right flank : TACTCCATACTTTATTCTCTGTATACTATTATAGTAAAACTCCATGGAGTTATTATTTATATAATCAAACTGTCGTAACTCCATGAATGTGACACTTTCATGGAGTTACGACAGCTGTTATGTTTGCTTGTTTTTCATCTTATTTGCTTAATACCTCAAAACTTATGGTCGTTGGATACCGGATAGCTCTTCTCAATCAGATTATCATCCGATGCATGATTGGAGTCTTTATTTAACAACCCCGCCCAAAATAAACCAAATTATATTAAAATTGAACTTTTAATGTGGTATAATCGCGAGTCTAAATTTATGCACACCTATAGTGGAATTTCAAATGAAATATATTTTATTGCTGCTATTTAACATCAGCTATGCTCCAAATCATCCTGTAGTGACAACTAGTCTTGAATTTAGTACCCAGCAAGCCTGCAAAGACGCAGGTAAACAAGTTCAAGAACTCACAAGAACCCGTAATGGCTCTGCAGTGCCCGATTTTATTT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //