Array 1 54422-58147 **** Predicted by CRISPRDetect 2.4 *** >NZ_PPAY01000007.1 Campylobacter concisus strain AAUH-35UCil2-a 1102177, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 54422 30 96.7 34 ......T....................... AATTTCTTGTCAAAATCTTTTCTTTCAGCGTCAG 54486 30 96.7 35 ......T....................... ACAAATTTAGTTAAGAAAGTCTTTTTTGGCTCAAA 54551 30 100.0 37 .............................. TACTGAGAAAAATAGATGAAAATGTAAATACCCTAAA 54618 30 100.0 36 .............................. CTTAATGAAGCCCTTAACTCTACGAGCAATCATAAA 54684 30 100.0 37 .............................. CTGCCTATCTCTCGCAAAGGTTGGGGGCTGGTATTAG 54751 30 100.0 34 .............................. TTACATAGGGCTTGGTATTTTCTTTTTGTATACG 54815 30 100.0 34 .............................. CATTTTAGGAAAGGTTAGAAAAATGACACTTGGT 54879 30 100.0 34 .............................. GTTTTTTGGTCTCTTTCGCTGCTTCTTTTGCTTT 54943 30 100.0 34 .............................. TCTGCATATTGTGTAGCCAGCGCTGCTTTTGGCG 55007 30 100.0 38 .............................. TGGCGTTGATATTGGCGTGCTTGGCGAGCAAGTGGCTT 55075 30 100.0 34 .............................. ATATCATCGCCACAAACAGTATGGACAATACTTG 55139 30 100.0 34 .............................. CCTTTGTTCTGCCTTGTTTTGGTAAGCCCCCTAA 55203 30 100.0 38 .............................. GTAAGCACGTAACCCTTAGCCCGTCGTCTGTCTTTTCA 55271 30 100.0 38 .............................. GAAAAATCACGATAGGGCATAAAATAATGCCTAAAACT 55339 30 100.0 37 .............................. AAATATGGTAGCGTGATAAATGCAGAGGGTGGCGAAA 55406 30 100.0 35 .............................. AAATAAAATTAAAAATGAAAGAATTTCAAAGAATA 55471 30 100.0 35 .............................. AGATCGATACGCCTTAAATCATAATCAGGCAATTT 55536 30 100.0 35 .............................. ACAGCGAAAAATACGCCATAAGCAACAAGAACAGC 55601 30 100.0 35 .............................. ATCGCACTGGCTACAAGTCCAGCCGTATTGTTATC 55666 30 100.0 37 .............................. GCTTTTTGATGTCGTTTGTCGTGAGGTAAATTCTATG 55733 30 100.0 35 .............................. CTCCTCTTTGTAATTTTCAAAAAAACTTAAAAGGC 55798 30 100.0 37 .............................. TGCTATTTGTTCGTAAAATTTCCACGCTGGCAAGCTC 55865 30 100.0 35 .............................. TCAGAAAGAAAAATATGGGAACCAGAAAAAGAAGA 55930 30 100.0 35 .............................. GCAACCTTTGATAACTTTTGGCTATCTCTTGGCTT 55995 30 100.0 37 .............................. AGCCTTTTTTTCAAAAAACAAATTTTAAATATCCAAA 56062 30 100.0 36 .............................. TAGATGCGGTGGCAAACCGCGAAAAAAATGGGGTTA 56128 30 100.0 34 .............................. CTGGCTTTTTTGAGGGACTAAGAAAAAATATAGC 56192 30 100.0 37 .............................. ACGGGTATAACAGCCTACCTAAACAAGGTGTAAAAAG 56259 30 100.0 37 .............................. AGTCGATTTTGTTTGGCTTAGCGTCGTAAAACTTGTC 56326 30 100.0 37 .............................. AAATACGCTAGCGTGATAAATGCAGAGGGTGGCGAAA 56393 30 100.0 38 .............................. TCGGGGTTGATGAATACGGCAACTTGATCAACCACTAC 56461 30 100.0 34 .............................. TAACGCATATTGAGTGCGGCGATGGGCAAAACGA 56525 30 100.0 38 .............................. AACGATAGTGAGGGCTTTATTTTAAGCGAAAAAACTGG 56593 30 100.0 38 .............................. ACTGACGGAAAAGAGAACAAGGACAACAGCACCGCCAA 56661 30 100.0 36 .............................. AGAAAAGAGTATTTAAATCAAGTTTTAGCCGATGGC 56727 30 100.0 36 .............................. TTGATAAAAAGAGTGCTGACTTTCAAAATCTAATGG 56793 30 100.0 35 .............................. ACGAGTGGATCACTTCAGCACAAAACCCAAGCGTT 56858 30 100.0 34 .............................. AAGGCGGTCTTGTAAGAAGTTCAGCTTCTGGCAA 56922 30 100.0 35 .............................. AGCCACGAAATAAAGACAGAGCAACAAGGATTTTA 56987 30 100.0 37 .............................. CAATAAACTACGCCAACTTTTCGTCCATATCTATCAG 57054 30 100.0 34 .............................. CTCTAAAATATAAGTTAGCTTTAGAGAAACTAGA 57118 30 100.0 37 .............................. TCTAGCTGTATATCTATATGTGCCCGCTTAGCCCATT 57185 30 100.0 33 .............................. AAACAAAAACAAGGTTATGAGCCAGTTATCTCA 57248 30 100.0 37 .............................. ATAGGGGTGACACCCTTGTCACTATGCAATGACACAT 57315 30 96.7 36 ..............T............... TTTTGTTGTATGCCTCTAGGCTGTTATTAGCTATCA 57381 30 100.0 36 .............................. CAAATCAAAGAAGGAGACAAAACGATGAATTACAAC 57447 30 100.0 38 .............................. TAAAGTCTAAAGCTGGCATATACTTCATAACGAAATTT 57515 30 100.0 37 .............................. GCTTTAAGCGTGTGGGATAAGCTCACAAGCGGAGATT 57582 30 100.0 35 .............................. TATCCTCTTTTAGCGCCAGCAGATTATAAAGATCG 57647 30 100.0 35 .............................. CCGCCATATTTAAAGGGCGGTTTTCGTTGGCTGTT 57712 30 100.0 37 .............................. GCTTATCGGTCTTTGCTACTTGTTCTTTGCTTAGACC 57779 30 100.0 37 .............................. TATCCCCAAAGGGCTTTAATAAGCCCCTCTTTATTTC 57846 30 100.0 36 .............................. TTAAGATACTTTTTCATAAAATTTAACCAATTTTAA 57912 30 100.0 40 .............................. GAGCTATATAAGAGCTAATAGAAGCTAGAGATTGGCTTTA 57982 30 100.0 40 .............................. CTGATGATGCCCTTAGGTTATATATTAGGACTGGTAACAA 58052 30 100.0 36 .............................. GGATTTGGCTTTGTTTCTACACCAGTCCCACCGCCA 58118 30 90.0 0 ..................T......T...T | ========== ====== ====== ====== ============================== ======================================== ================== 57 30 99.7 36 ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Left flank : CGAGCTTGATCCTCGCATCGGCTTTTTGCACGAGCCAAACTACCGCGCGCTAAGCCTTCACCTCGACCTTGCGGAGACTTTTAAGCCGATCTTGGGCGATACGCTGATTTTTAATATGCTAAATAAAAAAGAGATCACCGCAAAGGACTTCCAAACGGACGCTGGCAGGATAAAATTTAGCAACGACGCCGTGCAAAAGATCGAGCTAAAGATGATCTCGCGCCTTTGCGAGACGCTCACGGTGGGCGGTAGGGAGCTAACGTGGAGGCAGGTGATCCGCCGCGAAGCAAATAAGCTTAAAAAGTGTATCTGCGAGGACGCGCCTTATAAGGCTTTGGGTGGGAGTGAAATCGCATTTTAATAAAGCGTTTTTTAAGATTTTAAAAAGCTTGAAATTTGGGGCTTTGCGTATTTAAACATGGCTAAAATTTAGTCAAATTTAAGGCGAAAAAATATAGACTTCTTGCACCTAAAGGCCTATAAATCAGCTTTTTGGTGCG # Right flank : TCTTAAAAAAAGATATCCTTAATCAAAAAGCTTAAAATTAAACTTTAAATTTAGTTTGATATATTAAATTATTAACATGAGTATTGATATTTTAAAATATTTCTAAAGAAGTTGGACCCAAATATGGGTCCGAATAAGGTAGTTATAGACCTTCAAAAGGGTTTGAAACTACGTCTTTGCGATCAATTATATAAGGTATGATGGCTGCGTGACGAGCTCTCTTGATTGCTTTTTCTACCATCTCTTGATATCTTTTTGATGTGCCAGTTAGGCGTCTTGGCATGATTTTAAATCTCTCTGACAAACAATACTTCAAAAGTGAAGTGTCTTTGTAGTCTATAAAATCAATCTTTGCTTCTGTAAATTTGCAATATTTGCGTGAATATTTTCTTTTTTCTGCCATTTCTTTATCCTTTAAAATTAAAACGGTATTTCGTTATCGCCTTCAAAATTGTCAGCGTCAACATTTATATCAGGGATTTTCTCTTCATAATACTCTT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //