Array 1 1023-1355 **** Predicted by CRISPRDetect 2.4 *** >NZ_QCZV01000001.1 Edwardsiella piscicida strain S07-348 Edwardsiella-piscicida-S07-348-contig-1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1023 28 100.0 33 ............................ CTGACCAGCGCCCGCGCTTACGTTAAGAGCGAC 1084 28 100.0 33 ............................ TACGCTGCAGTGCTGACAGCTCACGAAGCTCAA 1145 28 100.0 33 ............................ TGAGGGAGCTACCATCGAGAGCAGCCGTTAGGC 1206 28 96.4 33 ..C......................... CCTAATCAGTAGTGATGCTATCACCATGTCCAG 1267 28 92.9 33 ............TG.............. CGGCGCCCACCTGGGGTACATCTTCTACAGTAC 1328 28 89.3 0 ..C.........T..............A | ========== ====== ====== ====== ============================ ================================= ================== 6 28 96.4 33 GTTTTCCCCACGCCTGTGGGGGTGTTTC # Left flank : CTACTTTTTGGTGCTCTTTACCGAAGTAGTTTGCGACATCTTTTGAGGTGGTAACAGCTCGGCCATCGTGAATAGTGACGACAGGAAGAACGGCCCTGCTTAACAACGTTTGAGAGGTAGTCATTTTCGTATCCTTTTTCAGAGGATACCCGAACGGCTCGGGTGGCCGAGTGCTGAAAACTTGTACGAAGGCAAGCGGGCTTATTCCCATCGCTGGTATTGTATTCGCCCACACTCGGCCATATCCGAAAAATGACCATAAAAAAACCGCATGTCTGACGGGTGCGGAGGCCGTTCGTAAGGTGTTTTCAGCACCTGAGCGGACTATACCCCCGACGCCGCGGGTAAAACTAATTTCGATTTATGATACTTTACTTACAAATCATAGGAATTCAATGAATCATTCTAGCCTGACCATACAGAGCCCCATCTGGCTATTCGACCAGTAAACCAACCACAATCTGTAGCTGGTTTAGTATGTTCTTTAACAATATAATGGG # Right flank : AATAGGAAACTGGCCGAGTCACATATCAAGGCCAATAAAACCAGGCTGCTGGCTATGTGGCAGATGGCGGTTAATGGGATGCATCCTTGGAAACTGTAAGAGGCAGCTATCTTGAAAATTATTGATGTGGATGTGGTCGGCGACCATGTTATCGAGGGCGAGTTTAGCGACGGCTTCCGTGGCAGGGCTGATTTAGCCGCACTGTTCAGCAAACCGCCCTTCTCTGCGATCGCCGACGTTAACCGCTTCTCCCTGACGGCCAGCGGCGTGCTGAACAGGGGAGATGCCGAGCTTTCTGCTGATACGGTTAGGCGCATGAGCAAAGGCGCGGTGGTATCGGCATCCTCACGCTCACTCACGCCAGAAAATGTAGAAGCGATCCTCCGCCAGGCCACCTGGGAATCCATGAGCGAGGGGCGCCCGGATATTTTGATACGCGGAGCAGCTGGGCCACGCGGACGTCATCAAGAGGGCCGGGATTGCCAGCCGCAGCAGTGCAT # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCACGCCTGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //