Array 1 106170-108910 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACR01000012.1 Streptococcus sp. OBRC6 ctgN82L127632C39.5746, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 106170 36 100.0 30 .................................... TTTTTATTTGTCTATTACTAATCGTGGCGA 106236 36 100.0 30 .................................... TCTATACTATTAGATTATTAGTTGATATTT 106302 36 100.0 30 .................................... AGTCCTTGAATGGAAACAAACTTATCCAGA 106368 36 100.0 30 .................................... CAACATGCAAACGCATTTTAGATAAGTTTG 106434 36 100.0 30 .................................... ACCGCTCGATGGGGACCTTGACGATCCGGA 106500 36 100.0 30 .................................... GTTCGAAAGTCTTTCGACCAAATGTCTGTT 106566 36 100.0 30 .................................... TAAAATGTTCATACTTTCCACATCAACATC 106632 36 100.0 30 .................................... CAAACAAATATGTCTATTACTTATAATAAA 106698 36 100.0 30 .................................... TATCGTAAACAAAGTTACATCTTCGGATAT 106764 36 100.0 30 .................................... ACCAATTTAAACGATTATCATTGTTATTGA 106830 36 100.0 30 .................................... CGGAAGAAGCTGAAATCAAAGCTATGTTAA 106896 36 100.0 30 .................................... CGAAATTGAAAAGCTACTTGAAGACTAGAA 106962 36 100.0 30 .................................... GACGAGCTCAGTGAAGTTGAACTCTATTAT 107028 36 100.0 30 .................................... AGCTGCTTTGGAACTGGAGCGAAAGGCTTA 107094 36 100.0 30 .................................... TTTTAATCTCATATAAATTTTCCTTTAAAA 107160 36 100.0 30 .................................... GGTCGTCTAGTAGCTTGATAGCCATGACTT 107226 36 100.0 30 .................................... GTCAGGCATTAGCATATCGCCAAAAGGATA 107292 36 100.0 30 .................................... TTGGGGCACGTAGAGTTTTGTTGCGATTTT 107358 36 100.0 30 .................................... AAGCTATCGGAAAAGAGTGGAACAAGCATT 107424 36 100.0 30 .................................... AATCCGAGAAGAGATTAGTAAGATTTCTGT 107490 36 100.0 30 .................................... AGACATTCTTTATTGTCTCGTTCTATTGCT 107556 36 100.0 30 .................................... AATTTTCAAATTTGAATTGACCTGAAACAT 107622 36 100.0 29 .................................... GTCACATTGGTCGATATTGGCGATTTGAT 107687 36 100.0 30 .................................... CCTCGCCTATCGCATTCTTGATTGAGTGTT 107753 36 100.0 30 .................................... AAACATTTTACCAATTTCTTTTCCAAAATT 107819 36 100.0 30 .................................... CTCAACTCAACTCTTCTATTCTGTCGTTGC 107885 36 100.0 30 .................................... CGTTCATTTAGTGTCATTGTCTGCCTCCAA 107951 36 100.0 30 .................................... ATGACATACTACATTTCAGACTGTTATCTG 108017 36 100.0 30 .................................... TGTTACTGGAATGAGACTAGGCGAAAGCCT 108083 36 100.0 30 .................................... TTACACGAATATCTACAGATGGCGTTTTTA 108149 36 100.0 30 .................................... CGCGCTTTTTTGATATAATCATCTCAAAGG 108215 36 100.0 30 .................................... TATCCAGATGGTACGACTGTAGAATTTAGC 108281 36 100.0 30 .................................... TCCGCGCTGTTCTAAGAATCGAATTTGTTT 108347 36 100.0 30 .................................... TCACGAAACAACCTGCAGACAAAATAGAAA 108413 36 100.0 30 .................................... AGCACGACCGCATGGAACGACAACGGAAAT 108479 36 100.0 30 .................................... TAACAGCTGCAACCATCAAAGAAGATAAGC 108545 36 100.0 30 .................................... ATCTTATTTGCTAGATTCCATTTACTACCT 108611 36 100.0 30 .................................... CACAAGGTAGCTTAAAACGTAGGCATTGGT 108677 36 100.0 30 .................................... AATACTCGGTTTGCGCGTGGGGAATACATA 108743 36 100.0 30 .................................... ACAAGCGATTGAATCGATTCTCTTAATTTA 108809 36 100.0 30 .................................... TGCCGGCCAACTTTACAAATACAGTTAATG 108875 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 42 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : ACAGTTGAATGAAAAGCCCGAAGTGAAATCTATGTTAGAAAAATTAGTTGCAACTATTACAGAACTAATTGCTTTTGAATGTTTAGAAAACGAGCTGGATTTAGAGTATGATGAAATAACAATTTTGGAATTGATTGATGCTTTAGGTGTAAAAATTGAAACACTAAGTGACACTGTTTTTGAGAAAAGTTTAGAGATTGTTCAGGTGTTTAAATATCTTTCTAAAAAGAAACTGCTTGTCTTTGTGAATATGTCATGTTATCTGTCTGAACATGAACTAGCTAAATTGGTAGAATATATTCAACTTCATAATATAAATGTACTGTTTGTTGAACCAAGAAAAGTATACGACTTCCCTCAATATGTAGTGGATGAGGACTATTTCTTATCTTGTGAGAATATGGTATAATATTAACAAATATAAGGAATCGTTCGAGCTGAAGTCTAGCTGGGACGAATGGCGCGATTACGAAATTTCGAGACAAAAATTGGTCCACGAG # Right flank : CACAATACATTTTAATCATAGGGCTTGCAAATTTTTCCAATCGTGTTATAATACTTTTTAGAGACATATCACCTACAGGAAATCTTTCAGAGAGCGTGTGGAGCTGGGAATCACGCAGAGGATGTAGCTGGGACTACTCGATTTATTTTTATGCAAACATAAAACGGTGGCTACGTTAGAGCCAATCAGAGGTGTCAACAAACTTTTTTGTTGTACATGAATGAAGGTGGAACCACGTTGCGACGTCCTTTTAGGATTGCCGCTTTTTATTTTGTCGGAAGGAGGAAGAGTTATGCTCTATATGATTGGTGGATCGCCTTGCAGTGGGAAGTCAACAATTGCCTCCCTTCTTACTCAGCAGTATGGGCTGCTTCATATCAAGTTAGATGATTTGACAGACCAGATGATGGATCAAGCAAGAGCGAACGCAAAGCCGATTTCCCTTCTGAGACAGGACAGAAGTCCGGATCAAATCTGGCTGAGACATCCAGAGGAGATGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //