Array 1 767947-768768 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009248.1 Corynebacterium sphenisci DSM 44792 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 767947 29 100.0 32 ............................. CCCGCCTAGAATCGCCGTAGACGGACTTTCAC 768008 29 96.6 32 ............................T AAGTCCCAGAATTTCCGTTTTCGTGGCATTGA 768069 29 100.0 33 ............................. GCATGTCCCGGCCGCAAGACACCTAACCGTACA 768131 29 96.6 32 ............................T GAGATAGCCCGCTCCAAACGGCGGAATGGTAG 768192 29 100.0 32 ............................. TCCAATACCCCGGATGCACACACACCGCAACC 768253 29 100.0 31 ............................. CAGGGGGCCTGGGGGTTCGGGCCTACAGGGG 768313 29 100.0 32 ............................. CAGCGGGTGGCCGCGTATACCTCAGGGGCCCG 768374 29 96.6 32 ............................T CAGGCCGTGTCCGCCGTGTGGCGGCGCGTGAC 768435 29 100.0 32 ............................. CGTCCGCTGCTGGAGGCGATCAACTCCGGCGC 768496 29 100.0 32 ............................. CATGGCCCCACGGATCAAGTGGGACATCAAGG 768557 29 100.0 32 ............................. GACTTCACCCGCCCCGGGGAGCGAATCGCCAC 768618 29 89.7 32 ............C........T......G TCGGCCAGGGATCCCTTGGCGCGTTCCCGCTC 768679 29 93.1 32 ..T.........................G TCACGGCGCACCGGCCATAACGACCAGCCGTA 768740 29 82.8 0 ...A......TAC..........A..... | ========== ====== ====== ====== ============================= ================================= ================== 14 29 96.8 32 GTCGTCCCCGCGTGAGCGGGGCTGTTCCC # Left flank : TCCGGCGGTCAGCGGCAGGCGCTGTCGCTGCTCATGGCCGGGTTCACGCACCCGAAGATCATGCTGCTCGACGAGCACACCGCGGCGCTGGACCCGCAGCGCGCCCAGCTGGTCACCGACCTCACCCACCGGATCGTGGAGGAGGGCGGGCTGACCACCCTGATGGTCACGCACAACATGGCGCAGGCCATCCAGCTGGGCAACCGGCTGGTGATGATGCACGAGGGCGAGATCGTGTACGAGGCCGGGCCCGAGGTTAAGGCCCGGCTCACCGTGCACGATCTGCTGCAGGAGTTCGTCAAGATCAAGGGCGCCGCCCTCTCCGACAAGGCCTTCCTGGGCTAGGCGGGGCGGATGCGGCCGACGGGGCCGCCACCGGGGCGACGGGCCCGCGGGGGCGGCCCCGCGGCGCTTCCCGCGGCCATCCGGGGCGATGGTGACGCGAGGGGTAAGTGAATGTAAATTAGGGGATACCGGATCATCGGCCCAGGTCAAGAAGT # Right flank : CGGAACGTAGTTAACGGCTGTGCCATAACTCCGATTGGCCTGCGCAAACGAGGCTTACCGGGGACGGTCCGGACGACGGCCTCCTCTCACAGCAGTAATCCCGTGCCGTGGGATCCGCCTGCTGCTGTCCCGTCTCTTCGAAGATGATTTCCCGTATCCCGTGAACGGTCTGTTACACCGGCGGGTTCGCGTCCGGGTGGGTGTTAGCGTTCGGGCGGAAACCACTCGCCGACGAGTGTCGCCGGCGTCGAAGAGGAGGGTGATCCCCAATGCCGAGTCCGTCCTACGCCGTCATCGACGTCGAGACCACGGGGTTCCGTCCGGATGACCGTGTGCTGGAGATCGGCGTCGTCGGCCTCGCGGCGGATGGCTCCGTGGAGCACCGATGGCAGTCCCTGGTGTGCCCGGGTCGCGACATCGACAACACCCACGTGCATGGGGTGACCCCGCAGCAGGTCACCGACGCGCCCTGCTTCGGAGGCATCGCCGCGGAGCTCGCC # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGTGAGCGGGGCTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGCTGTTCCC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.90,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2468275-2468730 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009248.1 Corynebacterium sphenisci DSM 44792 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2468275 29 96.6 32 ............................G GCGGCGGGGGCGCTGTCGCGCTTTGGAGGCAC 2468336 29 100.0 32 ............................. ATCAAGTACTCCGCGGAGACCGGGTGGGATAT 2468397 29 100.0 32 ............................. GCGATCCGGTGGGGCTCCGCCTCGGCGGCCGC 2468458 29 100.0 32 ............................. CCACCGCAGCACCTTCGCGATGGTCATCGGCT 2468519 29 100.0 32 ............................. CGGCCGGTCGGCTTCCGGTCCAGCAAGACCGT 2468580 29 96.6 32 ............................G GAGCACATGATGAGCACCAATGATCGCCACCA 2468641 29 86.2 32 ...G....T.......T...........G AACACCATCGTCGCCCACACGAACGGGTGGCA 2468702 29 89.7 0 ...G................A....C... | ========== ====== ====== ====== ============================= ================================ ================== 8 29 96.1 32 GTCCTCCCCGCGCGAGCGGGGCTGTTCCC # Left flank : CGGCTCGGCCGCTTCCTCGACGAGGTCCGCGCCGGCGCCACCGAGGGCTGAGCCCCGCTCCCTAGCGCACCGCGCCGGACACCGACCCCGGTGTCCGGCACGGCGCACCCGGGTGAGCCAATGGCGCGGCGCCACCGGCCCGATGAGCTCGACACGGGCGCTGACCTGCCCGAACCCCGGGATCCGGGCACGGCCCGATCCGATGCCGGAGCCGGGCCGGCAGCGGCGGATCCCGGCGCTCCCGGCCAGCGGGGTCCGGGTCCGCGGCCCGACCCGGACGGCCGGCACTGGCCCGGCCATCTCATGGGGATGCACCCGCATGGAGCGCAGGCAGCCGAGCAACACCACCACCGCGTGGACGCTCAGCACGAGGATCATCACGCGCGGGTGCGTGCCGGGGCCACGGTGGGGTTCCGATTCTTTCGGTCCGATACCCGCGCCACGGCGCGAAAGCGAATGTAGATTGAGCCGTGCCGGTGCATAGCCGCAGGTCAAGAAGT # Right flank : CTTTGCCCGCGAATCCGACACGGTGGCCCACAAGGGCGTCCCCGCGCCGGCGGGCCCGGGGAACGGCGACGCCGGCGCACCCGGGCGGGGTGCGCCGGCGTTGCCGGGGAGGGGCGGGATCAGCCGTCGACGAGCCAGTCGTTGGGGCTGAACAGCTCGAAGTGCACCCGGGACTTGTCGATCCCGGCCTCGGTGAGCTGCGCCCGGATGGCCTGCAGGAACGGGTTGGAGCCGCAGAGGTAGTAGTCGGCGTCCTCGGGCAGATCCACCTCGGACAGGTCCATCAGGTCCGGCTCGTACCAGGTGCGGGATTCGCCGTGGGCCAGGGCCTCGACGGCGCCGACCCGGCCGGAGCGCAGCACATCGGCGTCCTCGGAGCGGTCCGCGTGCAGGGCGAGCACCCGGCGGTCGGAGTCCACGGCGACCAGGTGGTCCAGCATGCCGAGCATCGGGGTGACCCCGATCCCGGCGGAGATGAGCACCACCGGGGTGTCCGCGGC # Questionable array : NO Score: 6.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCGCGAGCGGGGCTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGCTGTTCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.90,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //