Array 1 5577-5428 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGIBR010000020.1 Wohlfahrtiimonas chitiniclastica strain DSM 100374 NODE_20_length_5624_cov_191.689742, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 5576 28 100.0 33 ............................ AACACTTATAGCTACTATGATTAATAATCTACT 5515 28 100.0 32 ............................ CTTTGAGCAACTTACTTGTGGAGATATTTCCC 5455 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 3 28 100.0 33 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : ATAGGCAGCTTAGAAATAAACGTTGAGTTGCTGTTTTGGTTGGCTTG # Right flank : AGTGGTTCCATGGTGAATTTGGAAAGTTTGCGGTTCACTGACTAAAAATTGAGAGTTTATAAATGACATTACTAAAAGTGTTGGTACGACCTTTGTTTGTGTTGAAAATTCATTCATCACATCCTTGCCAGTGTTTGCAGATGCCAATAGCAATACCGGTGGCAGCACACAATGGAATAATTCAGTGAACATTAAAATGTCCATCGATATGTATGACAATGGCGTGATGGACATTGGTATCAATGCAGAAATTGAAAATAAAAATGAAATCTCAGACAGATTTAAACATTATTGCGGCTATGTGCTTGGGCGTTTATTCAGTTGTCAGTTGTATAAACGCGGCTGGGTGAATAATGAGCATTTTGGTACAAGCAGCCATTAAGACTGTTGCATTTGTAGCCATTGATCAAGCGCATTGGCAAATTGTTGACGCTCTTTTTGTGATAATGGTGGTGGACCTGAAGTTTGTACACCGCTTGAGCGCAATTCATCCATAAAGT # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 3320-50 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGIBR010000006.1 Wohlfahrtiimonas chitiniclastica strain DSM 100374 NODE_6_length_167148_cov_222.136361, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3319 28 100.0 32 ............................ TCTTTGTAAATTTCGCCTGTTAAGCGGATATT 3259 28 100.0 32 ............................ AAACAGAACGAGCAATTACACGCACAGAACGA 3199 28 100.0 32 ............................ CGAAGTCGGGAGCGTTGTCATCAATAACAATA 3139 28 100.0 32 ............................ ATGCTCGAAGAGCTAAACAATGGCGTATCATC 3079 28 100.0 32 ............................ AATAGTAGGAGCGTATCATCATTAGATGATAC 3019 28 100.0 32 ............................ CTGCTCTATCGACACACTAGCACGCACGAAAA 2959 28 100.0 32 ............................ TTGATGTAGATCAGGTTTCTTGACTTGCTGAT 2899 28 100.0 32 ............................ TTAAAAATTAATCTTCGGAACATCCAAGCATC 2839 28 100.0 32 ............................ GCCTTCATCATTTAACTTTTTGCCTTTGATAA 2779 28 100.0 32 ............................ AAAATACAGTGAACGCATGGCACAAAATAATC 2719 28 100.0 32 ............................ TAATAATCTTTGTGCTACTAACCTCTTCATCA 2659 28 100.0 32 ............................ ATTGAGCAAAACATCGTTGAGCGTACTGTAAA 2599 28 100.0 32 ............................ TGTCAAATCTTGCCATTTGGATTTTATTGAAC 2539 28 100.0 32 ............................ CTAACATTTAAATATTTACGAGGTATTTAAAT 2479 28 100.0 33 ............................ TAATATCATTAATCAAATTATTCAACGATCTAC 2418 28 100.0 32 ............................ CACAAAATAAACTCCTATCTTTCATTATGATA 2358 28 100.0 32 ............................ AATCAGCGTTGAGGAAGCGGAATTGATGTTCA 2298 28 100.0 32 ............................ AGGATGATATGCATACATTGCGTATGAGACAA 2238 28 100.0 32 ............................ ACCAAGAGTATATGTTGGTATCACAGAAGATG 2178 28 100.0 32 ............................ TGTTTGCCAATTCGATTGCGCGAACATCTTGT 2118 28 100.0 32 ............................ ACCCGTTTTTACTGATAAGCTGATAGATTGCA 2058 28 100.0 32 ............................ CCGCCTTCTACAGCCGCCACAGGGGGCGGCAT 1998 28 100.0 32 ............................ TTCTGCTGCATTGAACACCAACGCCCCGCCTT 1938 28 100.0 32 ............................ TCGTATTTGATTATGTTAAAGCCATCACATTC 1878 28 100.0 32 ............................ AGCATTAACCTTAAATTCATTGCCTTTAGTTG 1818 28 100.0 32 ............................ TATCGTCATAAAAATAATCATCAAGTGTCGTA 1758 28 100.0 32 ............................ ATCTGTGGATTGACTTCGTTAATTCATCCACC 1698 28 100.0 32 ............................ TTGAGAAGCCGCCCGGTTGGGCGGCGATTGGG 1638 28 100.0 32 ............................ TGCAGTGTCGTACGCTTCATTAAATCCTTTAA 1578 28 100.0 32 ............................ CTTAAGCCATGATTGAAAGCCGCCTTGCGCGC 1518 28 100.0 32 ............................ TGTCATGTATAAAAAGCAGCCTTCCATCAGTT 1458 28 100.0 32 ............................ GTCAGGTAATGCAAAAATAGCTGAGCGCCACT 1398 28 100.0 32 ............................ TAACCACTTCCATAGATATTTAAAGGATCCGG 1338 28 100.0 32 ............................ AGAAAGCATGGCAGCTTTAGTGAATTTATGGC 1278 28 100.0 32 ............................ GCACTTGCAATACAATCCCCTTTGGAGATGCA 1218 28 100.0 32 ............................ TCTAGTGCACTCAAATCACTACTGCATTCAAG 1158 28 100.0 32 ............................ GACGTATATCCCCGGCGGTGATATTATCTCGC 1098 28 100.0 32 ............................ CGCAGGTGAGAGAGAACACGCAGCAAGCGCGG 1038 28 100.0 32 ............................ ATTAGAACACGAATGGAGTCACTAACATGCAC 978 28 100.0 32 ............................ ATCCTTCAGAGGGTGCGACACAGGGTCGCTAT 918 28 100.0 32 ............................ ACTCAGCGATTCAGGAAAAAACACGCCATCGC 858 28 100.0 32 ............................ CGGATGATTCAAGTCAATCAGGAGCAGCTGCA 798 28 100.0 32 ............................ AATGCGCACGGGTGCAAGGGTTATGACGCAAG 738 28 100.0 32 ............................ AAGCGTATGCAATGCAAACTCTGAAACTGTTG 678 28 100.0 32 ............................ AGCTGACATACACATGACAAACTAGCGAGCTG 618 28 100.0 32 ............................ TGATAGTGATAAAGATCGCGCTGGCTGATTGA 558 28 100.0 32 ............................ TTTATTGATATGGAATTAATTAAGCCAAAAGA 498 28 100.0 32 ............................ TTCATTCATTCCACCTAATGCTTTGTGAAATG 438 28 100.0 32 ............................ TGGAGATCGCAAAGATGGAGCGCACACTATGG 378 28 100.0 33 ............................ CAAAGTCCACGGTTACAATACCGTGCTTGTAAT 317 28 100.0 32 ............................ TGTAATATTTCAAAGTCAGCTTACGATTGAAG 257 28 100.0 32 ............................ GTCATTCAGCAACTCTTTTACTTGCTCTAGCA 197 28 100.0 32 ............................ ATATAAAAGCTTCGACTCATCCGCTAAAACAA 137 28 100.0 32 ............................ TAAACGTTGAGTTGCTGTTTTGGTTGGCTTGT 77 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 55 28 100.0 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : TTGAATGCAGGTTTGTGGCTGTCACGCTTGACGGATTATGTGCACATTTCTTCTATTAAGCCGGTGCCAAATCGTGTGATGCATTATGCGATTTATCAGCGTAAACAGGTCAAAAGCAGTGTTGAGCGTTTAGCGCGCCGCTATGCTAAGCGTAAGCATGTGACATTTGAGGATGCCATGGCACATTTGAATGGCAAAACGCCAGAATATTGTGATTTGCCTTATGTTCAGATGAAAAGTGAAAGCACGGATCAACGTTTTCATTTATTGATCCATAAAGTAAAAGTGACAGCACCCACGGAGGCGGCAAACTTTACAACGTATGGTTTGAGTCATCATGAACAATTGTCTGCTGTCCCTGAATTTTAACCAATGTTTTTTGCTCTTTAAAAATTTGGATAAAAATCAGTAGCTTATAAGATAAGGAAAAATCATTGGTCTTTTCAGGTAAACTACCTTCGATCAGTGATTTTTCCTATCTTTTGTGCCGAAATTTTACT # Right flank : AATATAAAAGCTTCGACTCATCCGCTAAAACAAGTTCACTGCCGCATAGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 128850-127321 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGIBR010000006.1 Wohlfahrtiimonas chitiniclastica strain DSM 100374 NODE_6_length_167148_cov_222.136361, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 128849 28 100.0 32 ............................ TTTTTGAAGCTATCCACTAAGGCACGATCAGA 128789 28 100.0 32 ............................ TAGAAATCTCATTGTCCATTTCACAATAATAA 128729 28 100.0 32 ............................ ACCTTGCGCGCGCCGTGGTTTTTGAGAAATTT 128669 28 100.0 32 ............................ TCTTCATCATTCGCTATAGATGCTCTGATAAG 128609 28 100.0 32 ............................ CTTTCCTGTATGCTCTTTTGAGCGAAGAGATT 128549 28 100.0 32 ............................ AATGGTAAAGTTGACACTGCAACAAATTCACA 128489 28 100.0 32 ............................ GTTTTTATCAATAGTCGTATTTTTATCGTGCC 128429 28 100.0 32 ............................ CCATGAGCGAACAATTAACGATAGCCCTAAAA 128369 28 100.0 32 ............................ GCAATAGGTGAATCAAAATCTTTAGTTATAAA 128309 28 100.0 32 ............................ ATCATGGGCTTATTAGGAATGAAGATAAACAA 128249 28 100.0 32 ............................ GCGCGGCGGCAGGTGGACTTATAAAGGATGGG 128189 28 100.0 32 ............................ GCTTGATCGATATTTCCGCGTTGATCTTGCTT 128129 28 100.0 32 ............................ TGTTGATTGGAATCCCTGAGCCTGTAAATGTT 128069 28 100.0 32 ............................ ACCCGCCTCAAAAATATCAATGATCTCGTCAT 128009 28 100.0 32 ............................ TGAGTGTACGAAACAGAGCCGTCTGACTGCAT 127949 28 100.0 32 ............................ CTTTGCGATTGAGTCAATCGGGCTTTGAAATA 127889 28 100.0 33 ............................ CAGGGAACTGATCACCTTTTTTCCACTCTTTCT 127828 28 100.0 32 ............................ TCATTAAAGTCAAAAGCTCCGTTTTTTCTCGC 127768 28 100.0 32 ............................ AATCTGCATCGAAGCAATGCCAATTCTTGGTG 127708 28 100.0 32 ............................ TGATGCGGTATTCGTTGTAACCGGTGGTATTG 127648 28 100.0 32 ............................ GCAAACGGCGTTTTAAATATTTTCATTTCTTG 127588 28 100.0 32 ............................ GTTATTCTTCTCTTCATCACTTCCACGCAAGC 127528 28 100.0 32 ............................ GATCAGGCTCATTGTGAATTTTTGGATAAAGT 127468 28 96.4 32 ....................C....... AGTAGGTGACTTGCTGTGATGTATTTAGTTTT 127408 28 96.4 32 ....................C....... ATGTTGATCAGTCCATGATTCACTTGTTGCGA 127348 28 96.4 0 ....................C....... | ========== ====== ====== ====== ============================ ================================= ================== 26 28 99.6 32 GTTCACTGCCGCATAGGCAGTTTAGAAA # Left flank : TGATTACAACCATTATGGCAGTTTTAACAGGTTGTGCTTCTGTTGAGCAAGATACCGTGGTGCATGATTTTACTGCATATGGCAAGCTCAATGAGCCTTGGCGCATCGTGGTTAAACATGATGATCAGTTAGAGATTGAAGGGGTAATGGTTCGCGAGGGCACATTGAAAGTGACGCGATCGGCATATGCAAAAGGTGTTGAATTCTCAGGGGATTATGATGGGCAGCCATTGACATTAAACATCCGCTCATTGAAGTGTAAAGACAGCAATGGCGATGAAACAGACTTCACTGCCACGTTCTACTATGGCAAACGCACTTATAAAGGTTGCGCGGTTGCAGGTGCGATTGAGCATGCGGACACTTAAGACCTTTATGGTTTGATCTTTAAAAATTTGGATAAATATCAGTAAATTACATGTCATTGGAATAGGATTGGTTTTATGGCTATAAACTGCCGAAATCATGATGTTTCCAATGGCATTGTGATAGTTTTTACT # Right flank : GACCGGAGCTGTGCCATCGTAACGGGATTATGAACAGACAGTAAAACTAATTCGTTAAGTTACTCACCATAATACGCCCAAAGCAGGACAGGTTTTTTCTTGGTTTGTAAAAGCTTGTCCACTTTGCGCATTGTGTCATCATCCACAACCGGGCAGCCTTGACTGAAACCTAAAGGCAAATAGTTTGGGAAAGTTTCTTCATTCGGAATCATCTTAAAAGAGTGGAGCACAATGTAACGCTTAAAGGCATTGCTGTTACTCGCCTCTAGTCCATGGAGTTTGTAGTGAATGCCAATTCCCCATTTGCTCGGCGCGCGAATGCCCACACGGTATTTACCGAGAGAAGATGCATAGCTATTCGGTTGATTGCTAAAGACAATGTTTTGATTATCACTCTCAAAGCCCACATTGCCATAACCATGGGCGACGATGCTTTTGATCTGCGGTGATTGTGTTTTAAAATTCCACACAAAAAAGCGATCTTTACCGGAATGGCGCGC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //