Array 1 8263-9389 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVCE02000084.1 Pseudomonas aeruginosa strain PABL065 NODE_84_length_24592_cov_65.6976, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 8263 29 96.6 32 ............................A GCAGGATTTGGAGTCGGAGCGTTTACCTACAT 8324 29 100.0 32 ............................. GTGAACGATGCGAATCGGGCGGGGGTTTGGTC 8385 29 100.0 32 ............................. GCTTGGTAGATGCCTGGAACAAGTCGGTCAGC 8446 29 100.0 32 ............................. CGCGCTGTCCTCGGCCTGGACTGGACCATCGA 8507 29 100.0 32 ............................. TGGGCGAACGACGGCAGCGTCACCCAGGCGCA 8568 29 100.0 32 ............................. ACAGGGACGTTCTCCGCGAGCTGGCCATCGAC 8629 29 100.0 32 ............................. GCAGAGCGGATTGCTGCCCGCTTTGTCGGCAC 8690 29 100.0 32 ............................. GGGGTGGTAGCACCGGACTCGCGGATCTTGAA 8751 29 100.0 32 ............................. GCGTACATGACTGAGGGAGAGTCCACGGACCT 8812 29 100.0 32 ............................. TCATATAGCTTGTATTTTTCCTTGCTATGAGA 8873 29 100.0 32 ............................. AAAAACGACGGCATTCACTACGCGCGCCAGGC 8934 29 100.0 32 ............................. GCGTTCATTTCCCAGGACGTGGACCAGCTGCG 8995 29 100.0 32 ............................. GCCCCAAAAAGCGTTGGCGTCATCGGCTGGCT 9056 29 100.0 32 ............................. TTCATGAACGGCAGAACGTTGAGCGCCGATTT 9117 29 100.0 32 ............................. GTTGTTCTAGAGTCCGTTCAGGAGATGCTTCT 9178 29 100.0 32 ............................. AGGTATTCCTTGCCCTTGGCCAGGAGCACGCC 9239 29 100.0 32 ............................. TCATCGATCGTGGCGGCTGCACTGGCTGCCTG 9300 29 89.7 32 ..............C..........G.T. GTATCGACATCGATGGTGACCAGGCTGGTCCG 9361 28 79.3 0 A..........A..C..-.....A....T | C [9365] ========== ====== ====== ====== ============================= ================================ ================== 19 29 98.2 32 GTGTTCCCCACGGGTGTGGGGATGAACCG # Left flank : GGCATCGTTGTACAGGGCGACGAATTCCGCGCCCCAGAACAGCACGATCTGCGCCTTGGCCGGCAGCAGCGTGGCCATCGTCGTCTTCAGGCTCGCCGACCAGGCGTCCGGCGGGCCGAGGGGCGAACCGGCCGCGTCGAGGCTGAGCAACAGTTTCCCGACCGCTCCTCCGTTGGCCAGGAAGGCCGGTGGATGGTCGAGGGTGTTCGGGTCCGGTTCGATGGTGAAAGGCTGTGCCATGTCTGCGGAGTCTTGCTCGGTTCCGGTTGAGGTGGTGGGTTGCATGGAATATAGGAGGGCGGTGGGTGCGCTTGCGTTCAATCAGCTTGGGGGACCGCGGGATCCCGATGCGGGTAGGTTTCGAATGGTCCCGAGGGAGCTGCCGGATTAGGCTGTGGGATGAGTACGGCCCTCATTTCCAGGAGCGGCGCGAGGGCCGCTTGGCCCGGTGGAATTTTGCTGTTGTTTTTCTTTTTTTAAAACAATGGGATACGGTAAGG # Right flank : TGTCTACGCTCCTGCGGTTCGCCCCACCGCGCGGTATTTCCCATGGTGGGGCGAACCGCGCGGCACTACGACCAGTGGCGTAATCACCAGTGTCAGCCGCCAGTTGCCGGAGACGCGGATCGCCCACCGTCCGGCAAGATCCTCTTTCAGGGCATGGAGTTTCCAACCAACCTGGTTCACGTCGCTGGGGATGCAGGCTTCGCTCAGCACGAATAACTGACGGCGCAGGCATTGGGCGGGGGCTGCCTGGATACCTTGCCCTTACCGGTCTCGAAGAAGGCTTCCAGCCCCCTGTGGCGGAAGGAAATAGATTGTGAACAGGCGGCAAGTGAAGGTTGTTAGTGAGTTAGCGGAATGTCCGACGTTCGCTGTTGCACCATGGAGTTCCTGCTAATTTGGACAGGGGTGGTCGGTCCGGTCCATATCCCTCCTGCGCTCCTTCGCTTGCTAAACGGGGGGAGCAGGCGCATCCCTCGCTGGCTGCTCCTTGACGAGCGTCA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGGGTGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGGGTGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 18562-20300 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVCE02000084.1 Pseudomonas aeruginosa strain PABL065 NODE_84_length_24592_cov_65.6976, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 18562 29 100.0 32 ............................. GGATTGCTTCGCCCATCTGCCGGGCCTTGCGA 18623 29 100.0 32 ............................. ACCGGATGCAGTCTTAATCCCTTTTTGCGTCG 18684 29 96.6 33 ............................A GTTATGCTGGTGCTGTCATAGATCATGTCGAAC 18746 29 100.0 32 ............................. CTCTACGACGAGAAGTTTGGCCTGTCGCTACT 18807 29 100.0 32 ............................. TCTATGGGAGGTGGGGAGTGAACGAGACCGTA 18868 29 100.0 32 ............................. TTGAGGGCAAACGACGTTTTGCCCATCGAGGG 18929 29 100.0 32 ............................. TAACGGCCCGCCCCTTCACGCGACCTCCCGCG 18990 29 100.0 32 ............................. CCAAGAAAGAACGCCGAAAGGCCGTTAGGAAA 19051 29 100.0 32 ............................. ACGTTGAGTACGTCGGCGCCGTACTTTTCGTC 19112 29 100.0 32 ............................. CGGGCCTTGGCAGCGAGCAGGGCCTTCATGCC 19173 29 100.0 32 ............................. CGCACTGATGCCAGAGCCGGAGTCGCGACCGG 19234 29 100.0 32 ............................. TCGGCCATCACTGGCAAGGTGCGCGAAGGCGT 19295 29 100.0 32 ............................. GCGCTTCACGGAGACGGCCTGCTGTTCCCTGC 19356 29 100.0 32 ............................. TTCAGCAGGGCGTCAGGGATGGCATCGTGTCC 19417 29 100.0 32 ............................. GCTACTGTCGAAGCCGGCACCACTCTGGACGC 19478 29 100.0 32 ............................. GCCGGATTCCGCTGCCGGGCTACATCATCCCG 19539 29 100.0 33 ............................. CGGGGCATGACTTCAACCCACCCCCAGCCCTCC 19601 29 100.0 32 ............................. TCGCACTTCCAGCCATGGCTGGACAAAGCGGC 19662 29 100.0 32 ............................. GCAGTCAAGGCTGCCGGCGGCCAGTCCGCCCT 19723 29 100.0 32 ............................. GCCAGCAGGGATGCCAGCACGCAGCCAGTCGC 19784 29 100.0 32 ............................. CAGTGACGGCAGCAGACGCGGCGATGCTGGAT 19845 29 100.0 32 ............................. TCGGTAGACGCACAGATGGTCGAGCAACTTCG 19906 29 100.0 32 ............................. GCGCAGGGCAAAGCCAAGGTCACCGCCGGCAC 19967 29 96.6 32 ...........A................. TTCGAGGTCAGCGGCTTCGGCCCCGGCGAGCA 20028 29 96.6 32 ...........A................. CCGGGAATGAACGTTCCCATGTCGGCTACGCC 20089 29 96.6 32 ...........A................. GTCGCCAGGCCCACGTCGGCGGATCACCAACA 20150 29 96.6 32 ...........A................. ATGTAGCTGTTACGCGGTCCCGCGGTGCTGAG 20211 29 96.6 32 ...........A................. GTGATGGAGCGGACCGCCCCGAGCACCGCAGA 20272 29 93.1 0 ........T..A................. | ========== ====== ====== ====== ============================= ================================= ================== 29 29 99.1 32 GTGTTCCCCACGTGCGTGGGGATGAACCG # Left flank : TGACCCGCATCATTCCCACCATCGAAGAGGTACTGGCCGCCGGCGGCGTCGAACCTCCCAGCGCACCGCCCGAGTCGGTGCCGCCAGCCATTCCCAACCCGGAGGGAATCGGCGACCTCGGGCACAGGACGCAAGGGTGAGCTTCCTGGCCGTAGTGGTGGAAAACGTCCCGCCGCGCTTGCGCGGACGTCTGGCAATCTGGCTGCTGGAAGTCCGCGCGGGCGTCTATATCGGCGATGTATCGCGGCGTACCCGGGAAATGATCTGGCAGCAGCTGAGCGAGGGCTACGAGGAGGGCAACGTGGTAATGGCCTGGGCCGCCGCCAACGAATCCGGCTACGAGTTCCAGACCCTGGGCGTTAACCGTCGACATCCAGTGTTGTTCGACGGGCTGCAATTGGTGGCATTCCAGCCTCTGGATCGGACCACGGAATAGAGGATGAGGCGGTAGATTTTTCGAGGTGTTTTTTCTTCTTTAAAAACAATTCTGTACGGTAAGT # Right flank : GTGGAAGTACGCTCGCGCAGCGAGGATGCGATATATGCACGGGGCGAGCCGTTCACTTGAAAAGCCGACATTCCTGGCTGTCCTGTATTTCCCCTTTGGCATGGATAGAGCAGCCCCATAGGGCGAACGACGCCACCGGCGTCATTCGCCATGGCCGGGTCAACCGGAACGTCGAGCGGCTACCAGGCGCTGCTGCAGGCGCGTCAGGAAGGCCACTTCGAAGGCGGTCTTCTGCATCGGTGTGGGCAGGCTGTCGCGGCCGAAGGCGAAGGCGGTCCAGAGCTGGCCTTCGATCTGGTCGGCAAGCCAGTTCTCGGCCTGGCGGACGCCCTTGTCGATGGCGGGCTGGGCGGGAACCGGCCAGAGCAGGGATAGACCGGGTTGCCGGTCGGCGGGGGGAATCTCGACCATCAGGTCCTTGTAGCGTTCGATGATTGCGTCGACGTGGGTCTTTTCCTTTTCATCCTTCGTCATGCTGGGTACTCCGTTTCTGAGAGTCA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGTGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGTGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //