Array 1 1166652-1169393 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP073074.1 Chryseobacterium arthrosphaerae strain LMY chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 1166652 47 100.0 30 ............................................... TTCCTGATCATCTGATCTCTCAGAGCAAGA 1166729 47 100.0 30 ............................................... TTGATATGGCAGAGGGAGTGCGGTTAATGA 1166806 47 100.0 30 ............................................... ACCACCAGTCTTCTAATAGCTTCCCTTTAG 1166883 47 100.0 30 ............................................... TCGGCAACATTCACTCCAATCCGGAGCTAC 1166960 47 100.0 30 ............................................... CGGTTGAGAATCTTGTGGCTCCGGATAGTA 1167037 47 100.0 30 ............................................... TGCTTTCCTAATCTGTGATTGTAGGTTCTC 1167114 47 100.0 30 ............................................... ACTGGATTGGCCGTGACAGCAACGGCCTCT 1167191 47 100.0 30 ............................................... GCATAATCAGAAAACTCACAGGTATTTTCA 1167268 47 100.0 30 ............................................... CAAATTAATCTCCCTTTCTTGAAGTGCTTT 1167345 47 100.0 30 ............................................... GTTTCGTCTGTATTGACAAAAGCCAGGATA 1167422 47 100.0 30 ............................................... TATTGCATATCATGTAACTCAGATAGATCC 1167499 47 100.0 30 ............................................... AAGTAAATGCAACTACTATCAACGATCTTC 1167576 47 100.0 30 ............................................... CTTGATACATTTTATCAGCTTCGTCTTTAC 1167653 47 100.0 30 ............................................... TATGTAAGTGGTTATCACCTACTTTCTGAT 1167730 47 100.0 30 ............................................... CTGCCCCTATTTTGGTAACGCCTTTCAGTT 1167807 47 100.0 30 ............................................... CTTGATACATTTTATCAGCTTCGTCTTTAC 1167884 47 100.0 30 ............................................... AGAAAGGGAAAATGATATTTCTGAATTCAT 1167961 47 100.0 30 ............................................... TAGATTGTCTACACCTTGGTCTACTAATGC 1168038 47 100.0 30 ............................................... TTTCGTGCAGATCAACATTTCTCAAATCGG 1168115 47 100.0 30 ............................................... CAAGAATCTAATATATTCTGCTGATCTGCA 1168192 47 100.0 30 ............................................... TCTTGTGATTGTGTGAATACGCTCATAATT 1168269 47 100.0 30 ............................................... AGATTATTAGCAGGTACATTTTTAATTGTT 1168346 47 100.0 30 ............................................... TCGCTTTTTTTATACGCAGCAAGCTGCGCA 1168423 47 100.0 30 ............................................... CGGCAATAGCCTGGATCTGTACCCTGATAA 1168500 47 100.0 30 ............................................... TATCCATTACAAAGCCATTTGCCAGGGACT 1168577 47 100.0 30 ............................................... ATCTTTCCATTCAGCGCACGCTGAGCCATT 1168654 47 100.0 30 ............................................... AACGGTATTTTTTTTAAAGATGCTGATTTA 1168731 47 100.0 30 ............................................... CCCATCAATAAGCTGTACATCATCAAATAC 1168808 47 100.0 30 ............................................... TACGTCTGCTGTAGTTTTAGCAGCGGTACC 1168885 47 100.0 30 ............................................... TTTAAATGGTAAATTAATGGCCACGAATAA 1168962 47 100.0 30 ............................................... AAGGAAAAGCGTATTAAATCCCCGTTCTCA 1169039 47 100.0 30 ............................................... GTTGTGAAATAATTGATAAATATAAAACCT 1169116 47 100.0 30 ............................................... ACCTATAGAAATATAAAAGAATATTTATGC 1169193 47 100.0 30 ............................................... CATAAGGACCACAGCGATCAATAAGCTCCT 1169270 47 100.0 30 ............................................... CATTACTAACTTTGCTTTATTCCCATTTGT 1169347 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 36 47 100.0 30 GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC # Left flank : AGGCTCTATGATTCTCTGTGAAAAAGCTGTCAGAGATGAGGGATTATCCTATCATTATCTTCCTGATGAAATGTTTGCCTATGCGTCAACATCGATGACTGCAGCAATTGACCGCACATTAAACTCGATAAAAGCAAGCTATAAAACAGGAAGTTCCTGGACTATAGATTCAATGTATCGTGAAACCGCAGATGAAATTGCTTATTATAGCAAGTTAGGCATAGACACAGTAGAAATGGAAGCTGCTTCAATGTTCGCAGTAGGTCAATTTCGGAATGTCTCCGTTGGCGCTATTTTCGTAGTCAGTGATATTGTTGCTTTCGAAGAATGGGACGCACATATCAATTCCGTTGATACACAAACAGCTTTAAAAGATGCGTTTACAGTTTCGGTAATGACGTTGAAAAACCTGCAGACAGAGTAAATTAATGGAAGATTAGAAATTTAGTATCTTCGTGATTAACCACAGCGATATCGCTGCAAGGTTATTCTTGTAAGTG # Right flank : CCTCAAAAAATAATCTACTGGTTTTCAGTAGATTATTTTTGTTTTTAGAATTTAAAATTTAGAATAATTCAAGCTGTTGAAAGGTTGGTGGCGGTTCTTCTTTATTTCTGGCAAAGAATATTTCAATATCTCCAAATTGCTTATCAGTGATGCACATAATGGCAACTTTCCCTGCTTTTGGAAGCATAAATTTCACTCTTTTAATATGAACTTCAGCATTTTCACGGCTCGGGCAATGTCTTACATACATTGAAAACTGAAACAATGTAAAACCATCATCAAGCAAAGATTTACGAAAGCGGTTAGCATCTTTCATATTGGCCTTAGTCTCTGTCGGTAAATCATATAATACTAAAACCCACATAATTCTATATGCATTAAACCTTTCGGAATTCATAATAATTCAGGATAAGAGATCAGACGTTTTTCGCCTGTATAGCATTTGTACAGTGACGAAGCAGTTATTTTAACGGCAACCAACAGAGGTCTCGTTTTGTCGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [63.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.64 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //