Array 1 17006-15345 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQPJ01000094.1 Coprococcus catus strain MCC394 NODE_142_length_35276_cov_64.713547, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================ ================== 17005 36 100.0 40 .................................... TCTAAATTACATTCGTCACGTGCAACACTAATGTAAAGAT 16929 36 100.0 38 .................................... CATCATTCTTTCCTTTTCATAATATGTATCCTGTTTCT 16855 36 100.0 35 .................................... TGTACTATAGCTCACAAGAAAGATATACTGACCCC 16784 36 100.0 38 .................................... TTTTATTACTGTTTGTTCGAATACCAATTATCATGAAC 16710 36 100.0 37 .................................... AATAATTTCATAGCCTTTTCATAGTTTGTCATTTTTT 16637 36 100.0 36 .................................... TTTATTTCCTCCGTTTCAATTATAAGTTGTGTTTGT 16565 36 100.0 40 .................................... TAGATTTTAAACTGCTTAAATATTCCCATGTTTCATCTAT 16489 36 100.0 35 .................................... TATTTCCATGTCACCAAGTATCACCTTTTTAACAA 16418 36 100.0 38 .................................... AAATAGTAATTTCTATCTCTTATGTTTCCTGTTACACA 16344 36 100.0 40 .................................... GAAGTACATGTTTCTTATGGCATCATAGACTTAGAAAATA 16268 36 100.0 36 .................................... TCACGATTAATCTTTAACTGCATTTCTCTTTTTTTC 16196 36 100.0 36 .................................... TATTACTGCAATCACATAAGCTACTCTTTCTTTCTC 16124 36 100.0 44 .................................... GCGGACTTAGACGGCTGCTTATTACCGTTTTCAATGTGGGATAA 16044 36 94.4 38 ..............A....T................ TATACTCCTTGCCTCTTTATAGTTTGGAGTTACAGCTC 15970 36 94.4 41 ..............AC.................... AATACCTCCGTGTATTTTTAAGTTGTGTTTGTTTGTAATTG 15893 36 97.2 44 ...............A.................... TTTCGAAATCTTTTTTCATTTTAACAAGCGCCTCCTAACTTACA 15813 36 97.2 39 ...................T................ TAGAATAAATCTTCCTCTTCTGTCGTGAATGAACCATAT 15738 36 100.0 37 .................................... AAATTTTTGCTATGTAGTAGCCCTTCTTTGGCTTTGG 15665 36 100.0 37 .................................... GTGTTATAACTTATCAGAAAAGAATAACCCCTTGTCT 15592 36 97.2 32 ..................T................. AGATTAGGCTTTTCAACCCAAAGAGTTTCGCT 15524 36 94.4 37 ...............A...................A TATATTTCAAATAGATTTCGTTAAATTCCTGATACAT 15451 36 100.0 35 .................................... ACTACATCCTATATTTGGCTTAACAACGGTCTACA 15380 36 75.0 0 ......C.......AA...A.TC........C..TT | ========== ====== ====== ====== ==================================== ============================================ ================== 23 36 97.8 38 ATTTGGAAATAAGATGCCCCGAGAGGGGACGGAAAC # Left flank : GGCGGGTGGATGAGGTCCCGTGAGGGAACGGAGTATACTTGTAGATTGCCTTTTGGAATTTTTTAGATGATTCAGAAAAAGATACCCCGAGAGGGGACGGAAACGCTGGAATTTTATTATTGGCGAAATAATTCATGTTAAAAAAATAATAAACTCCGAGAGGGGCGGGAACTCGTTATTTCCAACTGTAACCCTAATCATAATTTCCTCATTTGGAAGAAAAACTTTTTATTTAATTTCAGATGCAAATGTGGAGAGTCTGTGATAAAATTTCTATGAATGAGAGTACTTTAAAAAATAGAAAAAGAACAGGTTTATTCTAAAAAGTAAAATTGCTGTTCAGATAGTATTGGTATAGTTTATAATTTTTCCGCGCACCGCATAAATACTGCATTTGGAGGCGATTGTGTATGTTAGATATAAGAAAAATATACAAGAAAATGATTTGCCACGCAAAAGAGTCAGAAAAGCCAGCAAAATAGCGGGCTCTGGCGGGCAGT # Right flank : TTATCGTTGCAAAACGATGAAAGGGGGATGAGTACGTGAGTTTACTGTATGTGAATGAAAATGGAGCGCTCATTGGTATTGAAGGCAACAAATGTGTGGCGAAGTACAAAGATGGCATGAAGACTTTTATTCCAATTGAGTCATTGGAAGGCATCACAATCATGGGGCAGTCGCAGGTGACGACGAAATGTATGGAAGAGTGCATGATGCGTGGGATACCTGTGACTTATTTCTCAAAAGGCGGCAGATATTTTGGGCGTTTAATGTCCACGGGCCATGTGAATGTTGAAAGACAGCGAAAGCAGAGCGCATTGTATGATACGGATTTTGCAGTGGAACTTGGGAAGAAAATTTTGAGCGCCAAGGTGAAGAATCAGAGTGTGGTTTTGCGGCGATATGAAAAGAGTAAGCATAAGAATCTGGAAGAGGAACAGAAAATGATGTCGATTTGCCGTAACCGTATTCTTACGAGCAAGAAGATAACGGAGATGATTGGTTTT # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTGGAAATAAGATGCCCCGAGAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,13] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.50,-7.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,1.15 Confidence: MEDIUM] # Array family : NA // Array 1 21220-20128 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQPJ01000001.1 Coprococcus catus strain MCC394 NODE_1_length_36887_cov_60.362701, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 21219 36 100.0 30 .................................... AATGATGCGCTTCGTCGATGACGATCGTAT 21153 36 100.0 30 .................................... TTAAGCGCAGAATGCCAATATGGATGTATC 21087 36 100.0 30 .................................... AGAAAAAGGAGGAAGAAACATGACAAGGAA 21021 36 100.0 30 .................................... AAAACCACTTCAACAGATGCTTATACGAAT 20955 36 100.0 30 .................................... GCAAAAGAATATGTTTCGTATACAATTGCA 20889 36 100.0 30 .................................... CTGTATTTAGTCCTCAAGTGCATCTGCTCC 20823 36 100.0 30 .................................... AAACAGGAATCGTATGATTGCACCACTCTC 20757 36 100.0 30 .................................... TGACTGTGACGGCATTGTTATACAATTCTG 20691 36 100.0 30 .................................... TACCTCCTTACTCTTTTACGGCTTGTGTTC 20625 36 100.0 30 .................................... AGAACTGTTTGAGGAACTGGAACGGCAGGG 20559 36 100.0 30 .................................... TACAGAAGGCTTTACGGCTTATCCGTACAT 20493 36 100.0 30 .................................... ACCTACTGGATTCGATAAATGAATACGGCC 20427 36 100.0 30 .................................... ATAGAATGCCGTCCGCCTTGCCTATGTAAC 20361 36 100.0 30 .................................... TCAGCACACAAAAAGCTGGATTTTATCGCC 20295 36 100.0 30 .................................... AAAAGGACTGTATGTTGAGAAGATCTACCA 20229 36 100.0 30 .................................... TTTCTTTGATCTGAGAAGGGCGGCGTTTCG 20163 35 80.6 0 ....................CA...A...T.-..TT | G [20132] ========== ====== ====== ====== ==================================== ============================== ================== 17 36 98.9 30 GTTTGAGAATGATGTAAAAATGTATGGTACTCAAGC # Left flank : GATATTAAATAAACTATATATAAAATTGGAGAAGGTTTCTAAGGAAGAACAAATGTATGAAGAGACGTTGGAATTGACGGCTTATATTCATGAATATTTAATGCAGTTAGAACAACAAACAAATTATATATTATCATTTGATGACAATTTGGAAATTCCTGCATTGTTAAAAGCGGTAGGGATTAAGCATGAGGAAATGGAAGATGATTTTTTCGAAAGAATAATACGATATGTAAAAATTGCAGTTGAAGTTTTATCAACAAAGGTATTTGTTTTCGTAAATATCAGGAGCTATTTGACAGATGAACAGATACAGGAATTGATTAAGGAAATTAGATATCAGGAGGCGAAAATTCTGTTTATGGAAAGTCAAGAAAGAGCTTGCCTGGAAGGAGGAATGCGGTATATTATAGATAGAGATGGTTGTGAAATCTATTAAAATCACACAGCTTGGGTACCTTGTTTTATGCAGGTGATAGCATTTCATTTTTGAATTTGAG # Right flank : TATTTTTGATTCATCCTCCCATGCGAGGATTTGAGAATGATGTAATGGTATTAAAACAGGTTATTCCCTGTCGGTTGTGATAGGGAATTTTAGTATATAAGGAGAGAATAACTAGGAGGCAGAATGGCAGTACCAAAGTATTATGAAATGTATCATTCTTTTCTTCAGAGTTTATCGGATGGCGAAGAGCATCCGTATTCAGATGTCAAAAAGAAAGTAATAGAAGATTTTAAGCTGACAGATATAGAACTGGCAGAGCTGCTGCCAAGTGGAAAACAGCCTGTGTTCAGCAATCGCATTGGATGGTGCAGAACGTATCTGAAAAAGGCGGGGTTGATAGAAAGTCCGACAAAAGCGCATTTTATGATTACAAAATCAGGAAGAGAAGTATTGAAATCAGGGAAAAAAATTACCAATGAGGTTCTTAGAGAATTTCCTTCTTTTGTAAAGTTTATTGACGGTGATACCAAGAAAGTTAAAGATACTGCAGAAGAAAAGGA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAATGATGTAAAAATGTATGGTACTCAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 96398-96630 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQPJ01000037.1 Coprococcus catus strain MCC394 NODE_48_length_122902_cov_77.338684, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 96398 29 100.0 39 ............................. TTGCTAAGTTCCTCATCAAGGTTTCTAAGACACTTGTTA 96466 29 100.0 39 ............................. ATTACATCTATCTCGTTTTCCTTAAATGGATAATAATAA 96534 29 96.6 39 ...................T......... CTATTTGAAGAATTCTTCAGCCACAAAAATATAAGTTTC 96602 29 72.4 0 ...............C...T..GCA.TGT | ========== ====== ====== ====== ============================= ======================================= ================== 4 29 92.2 39 GTTGAACCGTACCTATGAGAGATTGAAAC # Left flank : CTATCCCAAGGCTTGTATTCTGTTACAGTTTTCAAATAGGTTTCGGGATCGCCGTTCAAGATAAGGTCTGCATATCCAATCGGGTCATTGTAGATCAGATAGTCCAGCTCTGACCGCTGATACATATTGTCAGCAATCTCGTTCTCAACGGCGATAGTGTCAATCGCAATCATACTGCCGTCGCTGAATTTCAGTTCCACACAGCAATTATCCATATTGTAGGCACAAGATATTAAGGTTTTCATGGTATGTCCTCCATAATTCGTAATATAAAGCGAAAATCCCGTCTGACTTCCTGTTAGAAATCAGACGGGATTTGTCCGTATGCACCCCGGAAACCGTCAGCTAACAGTTGATAAGTAAATTAGTTCCTTATCACTGTTAAGCCAAGGTTTTGCAGGAATTTACTATGAAGAGGTTGACCGACTTTTTTGGAGAAAAAGATTGAAAAACGGTAGAAATAAGGTATAATGAAAACATGAAACGCAGTAAACACTGTT # Right flank : TGCTCTATACACTGTAATAAATGTGGATGCAAAAGAGCGTAAATCTGAGCAATTGATGTCAGTTAGACAGATATGAATAGTTCGGGTTTTTTATTTTTTTGTTGCGTTTATGCGTTGTGTATTAATTGTAAAAATCTGCCGTTACGGGAATAGATTCGGAGACGGAAAATGCTATGATAGATACATCAAAAGGGCTTGAATAAAAATCTTCATTGTCTGAGTTTTTTCGGACAGCGAGCAGATATTATAGAGTTTGAATAACGGACTAAAATGCCGAAAGCCTGTATTTATGCGGGTTTCCGGCATTTGTTTTATCAAATGGCTCTAGTTTGGCTCTATTTGTGGGGAGAGTAATGTATAAATATGATATGTATTTCAAGGTAATGATTGGTAGGTGGTTAAGTGGATATTTTATTTAAAAATGATGATTTTGTATTTTCATACAGAGTTGGCGGTATATTGATGCGTAATGGTAAAATCTTGTTACAGCGTCCAAAGAA # Questionable array : NO Score: 5.47 # Score Detail : 1:0, 2:0, 3:3, 4:0.61, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCGTACCTATGAGAGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //