Array 1 534647-532981 **** Predicted by CRISPRDetect 2.4 *** >NZ_FLSV01000003.1 Elizabethkingia meningoseptica isolate Elizabethkingia meningoseptica CCUG 214, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 534646 47 100.0 30 ............................................... TGAGCAAACAAAACTTGAAGTATTCAAAGA 534569 47 100.0 30 ............................................... TATTGTCAAATGATTGGAAGATATTTTGGA 534492 47 100.0 30 ............................................... CGAAGATATTCAAGCAAAAGATGAAGTTTT 534415 47 100.0 30 ............................................... TGGATCTAAAGAATACATAAAAAAAACAGC 534338 47 100.0 30 ............................................... TGGCAAAGCTAAACTTGCTGTAATGGGTGA 534261 47 100.0 30 ............................................... TAACTCTTTAAAATAAAACTCATCACTATG 534184 47 100.0 30 ............................................... CGCTCTTGTTACCTTTTCCATTTTACGATT 534107 47 100.0 30 ............................................... GTACAAATTGTTTGTACCATGTTTTAGAAT 534030 47 100.0 30 ............................................... TAAATCCTGTAATGTTAATTCAGAATCAGC 533953 47 100.0 30 ............................................... TACCGAGCTTCCGGAAATGCAGGAGGATAT 533876 47 100.0 31 ............................................... TAGTGGGTGACAGTATCATCATCAAAACATT 533798 47 100.0 30 ............................................... TAGAATGAAAAGACCTCGTAATACATTAAA 533721 47 100.0 30 ............................................... TATGTAATAGACGATCCTTTGGCCTGTAGT 533644 47 100.0 30 ............................................... TATTCATACGCTCATAAACTCGCAAGACAT 533567 47 100.0 30 ............................................... TGCGCTGCAGCACACGGAAAAGCCCGTGCA 533490 47 100.0 30 ............................................... AAAAAGTATGTCTTGAAGAAATTAAAAAAG 533413 47 100.0 30 ............................................... CAGCCGTCGGCATGGCCGCCCAGGCCCAGG 533336 47 100.0 30 ............................................... TAATCTTCTAGAATAGTAGTTGGAGATTTA 533259 47 100.0 30 ............................................... GAAGACGAAGAGGGCGCAAATTTCGATCCG 533182 47 100.0 30 ............................................... CAATTAAAGAGAGTTAAAAAATCAGAAGCT 533105 47 89.4 30 ..................T....T..A.....A.....G........ ATTCTGAGGGCTACTTTGACGTGACCAAAA 533028 47 74.5 0 ..................T....T..A......G..G.TAGA.T.CT | T [532988] ========== ====== ====== ====== =============================================== =============================== ================== 22 47 98.4 30 GTTGTGCAGTATCACAAAGATACAGTTAAATGTAAGCAATTCACAAC # Left flank : ACAAGCTAACCCGCCCCTTAATGGTTGCGGTTAAGATGACCGTGATCTCTCTGTATAAATGTTATACGGGAGAAAAACGTTTGATTTCTTACCCGGAGCTGGTATGAAAGAGGACCGTTTTAATGCATACCGGATTATGTGGGTTTTAGTATTATACGATTTACCAACCGAGACCAAAGCCAATATGCGGGATGCATCGCAGTTCAGGAAACGCTTATTGGATGATGGCTTCTCTCTTTTCCAGTTTTCTATGTATGTCCGCCATTGCCCCAGCAGGGAAAATGCCGAAGTCCATATTAAAAGAACAAAAGCCATGCTGCCGAAGGCCGGGAAAGTAGCTATTATGTGTATTACGGACAAGCAGTTTGGGGATATAGAGATCTTTTTTGCCAGAAACAGAGAAGAACCCCCACCAACCTTCCAGCAATTGGAATTATTCTGATTTTTTGAATCCTAAATTAATACAAAATCCGCTGAATATCAGCGGATTAAATTTTGAG # Right flank : AAGGAAATTTTACAAATCATGGATTAAATGTTATATTGAGGTCTTCATAGATATTTAGAAACCTCCTATATTTGCAACAAACCTTTCCATGCCCTTAGAATACCGAAAATTAAAACCTTATGAAAGCAGAATTTACAGAGAGATTCGCTTGGAGAGTCTGAAGAAATTTCCTGAAGCTTTTGAGGCAGATTATCAGGATGCGTTGAGAACTGAGAAACTTCGATTCGAGATTGATATTGAAAATCAGGAAACCGACAGATTTATAATTGGTGCATTTTATGGGAATGAGCTTATCGGTATCTGTGGTTTTGTAAAAGATGAAAGTGGCATAGGAAATGTATTTCAGATGTATGTTAAAGAAGAATATCAGGGGAGAAACATTGGTATGGCGCTTCTTCGTACGGTTATAAAGGAAGCCGATACAAAAGAAATTATACTGGAAGTAAAGCCAGATAACTTAAGTGCTTTTCATTTGTATCAGAAAGTAGGGTTTAAAGAAA # Questionable array : NO Score: 3.18 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGCAGTATCACAAAGATACAGTTAAATGTAAGCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.60,-4.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [18-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //