Array 1 119629-117799 **** Predicted by CRISPRDetect 2.4 *** >NZ_BFLY01000018.1 Escherichia coli strain HUST187 sequence018, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 119628 28 100.0 32 ............................ TGAAAGTTGACGCCAGCGGCGACCCGCGTCAC 119568 28 100.0 32 ............................ AAGGCAAGTGATGGCGAAATTACCCGCGCAAT 119508 28 100.0 32 ............................ AAATTGGGGACACTTTCTTCTACCTCTTTTGT 119448 28 100.0 32 ............................ TCAATGCTGCTAAACGCGCACATGAAGAGTCA 119388 28 100.0 32 ............................ GCGCACGGCGTGGCGACAGAGAGCACGCCCGC 119328 28 100.0 32 ............................ AGTTCGGCATGAGCAGCTCCTCTGTAGTCAGA 119268 28 100.0 32 ............................ AGCCAAAATAATGCGTCGCTTTCTGACATTTT 119208 28 100.0 32 ............................ TCGAGCGTACCAGGTTTACTGTCGTCATATAC 119148 28 100.0 32 ............................ ACAGAACAGGCGAAAGAAAGGGTACGCAGTAA 119088 28 100.0 33 ............................ TGGATTCCAAACCGCCCACCAACAAAAACAGGT 119027 28 100.0 32 ............................ GATACGATCGAATTTAGTCACTGAATACCCCC 118967 28 100.0 32 ............................ GGGTTGCGCAATGGGCTGGCCGACGAACGCGG 118907 28 100.0 32 ............................ AGGTCGTAAACCCCATTTTCAAAACCAATCAG 118847 28 100.0 32 ............................ TGTGGCGCTGATGCGTCTGGGCGTCTTTGTAC 118787 28 100.0 32 ............................ GCGCGCAGTGCCTGATAATCAATTTTGCTCAT 118727 28 100.0 32 ............................ TGTACGGCAGTCTATTAGCTATAGGAGCCTGA 118667 28 100.0 32 ............................ AGCGTTCGGTGAATATTTTCCGCCCGAGTCCA 118607 28 100.0 32 ............................ TGGGGATATGCGCGGGATTTGGCGGTGGTTTA 118547 28 100.0 32 ............................ GTAGAAGCTCACCATCAGCGCGTCTTTTTTGA 118487 28 100.0 32 ............................ ACATTTCCGCCGTTATGAATCGGTATTCCATA 118427 28 100.0 32 ............................ ATCCTGGCAGAACAACCAGTCAGCAGATCCCC 118367 28 100.0 32 ............................ AATTCGTGCTGGCGCGGGTCGTGGCATCACGT 118307 28 100.0 32 ............................ TGACGTCGCGTGAATATGACGCCGTTGTTTTT 118247 28 100.0 32 ............................ TCATTCTGTACAGAAAGATCAACCATAATATT 118187 28 100.0 33 ............................ GTTCGACGATTGAGTCCGCCGCTGTTGTTTGAT 118126 28 100.0 32 ............................ CGGCGGACCACTCATCATCGTATAAATCTTTC 118066 28 100.0 32 ............................ GCAAACGGAATTAGCAGCAGCATGATCAAAGA 118006 28 100.0 32 ............................ GACGAATGCCGCACACCAGGGCGTCTCGTCGT 117946 28 100.0 32 ............................ CTGGAGGCGCTCACACTCACGCGGAGTGAGAC 117886 28 100.0 32 ............................ GAATATTTTGGAAAAATAGCTATCAATCCGGG 117826 27 92.9 0 .......................C-... | T [117807] ========== ====== ====== ====== ============================ ================================= ================== 31 28 99.8 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CCTTTTTATGCGCGCCATGCCCACCGCATACAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAAGATGGCGGTGAGGCGGGGATTCGAACCCCGGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTTTTGCTGCCAGACCTCATAGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAGTGAAACGGTCAAGAAGAATTTATATAGATTGATTTGTTTGGTTACGCAATGAACACGCTGTTCGCGGGACGGAGATTATGACCGTATGTGTTCTGGTCAATTGTTTATCAAAAGCTATGCAGAAAATATGAGATTGAAGAAATACCAAACCGACCCTTTTTCTAGGTTGTAATGTAACTCATTGATTTTCTTATTGCTATTTTGAAGTCTGGAAAAAGGGTTTGAATCTGCGATTTTGTAAGTTTTAACAGTAAATCAATCGGATAGTCTGCTATTATTCCA # Right flank : CTCAACACTCCATCCTCTAATATTTATTCCCCATAACTCATAGACGCAAAAAAGGCCGGTTAAACCGACCTTTTACTCATTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAGGATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGTGCAGTAACCACGTGACCGTTTTCTAACTCTACGCGGAACATGGTATTAGGCAACGTTTCAAGAACGGTACCTTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCGTAATTTGAACCGGCAAGATAATGCCGAAGTTCTGTAAATAAGTAAAGATTTGCGCGCTAAATCGCAACAAACAGGTTCGGCACATTACTCCGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 129256-128686 **** Predicted by CRISPRDetect 2.4 *** >NZ_BFLY01000018.1 Escherichia coli strain HUST187 sequence018, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 129255 28 100.0 32 ............................ AGCAGCTTTCCAGCGAGCGCGGTTAACTCACT 129195 28 100.0 32 ............................ AAAACGGCGGGTTTTTTACGCGTGTGGCTGCA 129135 28 100.0 32 ............................ GTTAACCGTTTCACACTTAACACTATGAACCG 129075 28 100.0 32 ............................ CTACAGCAACTGATGCAACGGTAAGCGCGATC 129015 28 100.0 32 ............................ AGCAGCGGTGGCGAACCGCGCGTTGTTGATTT 128955 28 100.0 32 ............................ AGAACTCGAAATTTATCGCGGGACTTTTCAGC 128895 28 100.0 32 ............................ AGGCTGCTGGCGCTCTCGTTGTTAACGGCAGC 128835 28 100.0 32 ............................ GTTCCACGCGGATATCTGTAATTTCCAGCAAA 128775 28 100.0 32 ............................ CTGAACGTTGAAGAGTGCGACCGTCTCTCCTT 128715 28 85.7 0 ....................T...C.CT | C,A [128689,128692] ========== ====== ====== ====== ============================ ================================ ================== 10 28 98.6 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AAATTCATCGTCGAGTTGCAGGTTCAGTTGGATCAGAAAGGTGTTTCTCTGGAAGTGAGCCAGGAAGCGCGTAACTGGCTGGCCGAGAAAGGTTACGACCGGGCAATGGGCGCTCGTCCGATGGCGCGTGTCATCCAGGACAACCTGAAAAAACCGCTCGCCAACGAACTGCTGTTTGGTTCGCTGGTGGACGGCGGTCAGGTCACCGTCGCGCTGGATAAAGAGAAAAATGAGCTGACTTACGGATTCCAGAGTGCACAAAAGCACAAGGCGGAAGCAGCGCATTAATCTGATTGTCAGGTAGGTTGGTCAAGTCCGTGATCTCGTCAGGGGTTACGGACTTTTTATTTATGGGGGGAGGAGGTTCAGACCCTTTTTTTAATGATGATGCTAAGTTATTGATAATTAGTGCTGCGGGTAGGTAAGGATAAAAAAGGGTGGCAGCAGGAGATTGAGATGGTTTTGCTTTATTAACAACGGGCTAAACGTGTAGTATTTGA # Right flank : ACGATAGTGTTAGACGTTTGGTCGTGCAATGACACTCTCAACTTCAAACCATTAGCGTTAGCACGCAATAACAATCGTAATAATTGCGATGGAAATCAATTTTCAGCACATAAATCAATGCTGTACTAAGCCCAATACCTTCAAATATAAAATAATCACAGGATGTGTTTATGTCTTCGAATTACCTTACGCCTTCCGATCTCAAAACCATTCTCCACTCCAAACGCGCCAATATTTATTATCTGGAAAAATGCCGGGTACAGGTGAATGGTGGGCGGGTGGAGTATGTTACCAGCGAAGGTAAAGAGTCGTACTACTGGAATATCCCCATTGCGAATACCACGGCGTTGATGCTGGGAATGGGAACTTCCGTTACCCAGGCGGCGATGCGTGAATTTGCTCATGCCGGGGTGATGGTAGGCTTTTGTGGTACGGATGGCACGCCGCTGTATTCAGCAAATGAAGTGGATGTTGATGTCTCCTGGCTCAGCCCACAAAGT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //