Array 1 2367166-2369632 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWRA01000001.1 Corynebacterium diphtheriae strain 46/F Scaffold_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2367166 29 100.0 32 ............................. TTGTCGAATCGATAAAAAGCGGTGTGGGGCCG 2367227 29 96.6 32 ............................T AATTTCCCCAATCGACTTGCACTATTTTAGTA 2367288 29 96.6 32 ............................A CCGGCTCCGTGAAGGTAAACGACCCGCGCAAC 2367349 29 100.0 32 ............................. GACTCCGGTTGTGTCGTCCTCTATGGTGACCC 2367410 29 96.6 32 ............................C ACCAACGACGAAAAACACATCAAGGGAATGGA 2367471 29 96.6 32 ............................C GGTGGTGGCTTCACCGCTGGCGAAACTGCTTT 2367532 29 96.6 32 ............................T TTGGCGTCACAGTAATCAGTGAATGCATTGAC 2367593 29 100.0 32 ............................. CTGTAAAACGCAGAAAAGACCCCCTACCCTCA 2367654 29 96.6 32 ............................C CATGGGCAGGCATCTATTGCCCCGCTGGTGTG 2367715 29 96.6 32 ............................C CCACACTGGGTGATCACCTCGTCATCATGGCT 2367776 29 100.0 32 ............................. AAGTCAGCATGAGACTCGATGTCTGATTCTTT 2367837 29 96.6 32 ............................C CCTGTTTTCTGATCAGCGTCGCGTTCCTCAGT 2367898 29 96.6 32 ............................C TCCCGGCGCGGAGCGGCAGGCTGATGAGTGGG 2367959 29 100.0 32 ............................. AAGGACTCGACGCCATCCCCGGCGCGATGGAA 2368020 29 96.6 32 ............................C TCGGAGTCATCCACCACAACCCCACCAAAACC 2368081 29 96.6 32 ............................C ATGAGCGGAATCACCAGCGACGAAGCCTTCGC 2368142 29 100.0 32 ............................. CAGTCAGAGTGCCCGTTTGCGCTGGTATGCAA 2368203 29 100.0 32 ............................. ACTTGGAGAATGTCATGAAAAAAGTTCGTTTC 2368264 29 96.6 32 ............................C AATGAAAAGCGTGCCAGCCAGCCAACCACCGC 2368325 29 100.0 32 ............................. GATTTCGCCATGGAACGAACGAGGAATCATCA 2368386 29 96.6 32 ............................C TCGCAGAAAGCTTCGCCGCCGATCACGGTGGG 2368447 29 96.6 32 ............................C CTCATCTGCTGCTTCTTCGGTTTCTTCCTCAG 2368508 29 96.6 32 ............................C GTGGTGTGGGATGCCTGAGCGGCCTCATTACC 2368569 29 100.0 32 ............................. CACCACCCAATTTGACGAGGAGCACACCCATG 2368630 29 96.6 32 ............................C ACTGTGGAGCAGCCGTGCTCTTCGTTAAAGAC 2368691 29 100.0 32 ............................. AATCAGGCAGACTTCGAGGAGTTTGGAAGGGT 2368752 29 100.0 32 ............................. AATCAGGCAGACTTCGAGGAGTTTGGAAGGGT 2368813 29 100.0 32 ............................. CTATGGGCCGACATCGTGCATTCGCTCAACGG 2368874 29 100.0 32 ............................. TCGTACCCCCGTATGGGGGCAAATGCCCCGCG 2368935 29 96.6 32 ............................C ACATCATGGTCAACACAGGAACCTGCAAGTAC 2368996 29 96.6 32 ............................C GGGTGCGCCACCGGCTCCCTTCAGCCAGGAGG 2369057 29 96.6 31 ............................T GAGCAGGACGAAGATTATCTAGCGAGTCTGT 2369117 29 89.7 31 .G...T......................C CTCGTGGCCTTGATCGTCCGTTATCTTGGGT 2369177 29 86.2 32 AG...T......................C AGCATTGTCGACCCCTTCAGCGAATCGCCGTA 2369238 29 100.0 32 ............................. CATTGTGCACAATGTTGTATCGTCGAATGCCA 2369299 29 100.0 32 ............................. GTACGCTTCAACGTCTTGTGCGGTAATCATCA 2369360 29 100.0 32 ............................. GTACGCTTCAACGTCTTGTGCGGTAATCATCA 2369421 29 96.6 32 ............................C CAGCTAATACCGGCTCGCTCGTATGCCGCCGC 2369482 29 96.6 32 ............................T TATGCCCTCCAAAAATGCCCTGTATAAACATC 2369543 29 100.0 32 ............................. TGCGCTGCTTCGACGCCTCGAGCCATTCGGAG 2369604 29 89.7 0 ...........GT...............C | ========== ====== ====== ====== ============================= ================================ ================== 41 29 97.4 32 GTTTTCCCCGCACCAGCGGGGATGAGCCG # Left flank : CTTACTTGGAAAGAAGCTGAGGCATTGGCTGGAAACACAGTGCGTCTGCCAGCCCGAATAACACGTAGAGATTCGGATTTTAATGCCGTTATTGATTCGCTCGAAGCACAAACACCACCAGAATGGCAACGATCCGGTTTGCTTAAAGGCCAAGTTGCGTTGCTTTTCGACGAAAGAGGAGAGGCTCGTGTAGGTCGATTCCTAGTGCGTTATACCAATGAACGTGGATTAGAGGTGGAGGTCTGCCCAAAGGAAGACGCGTAAAAGGAAACCCCGCTGGTGCGGGGAAGTATGCCTATACAAATCTTGTAGAGATATTAAAAAGGCTCATCCCTGATCGCAGGGAACAATGCCAGCCTATGGCTAGAAGAAAGGACTAAGCAAATTTGGGTGAATGGCTGATCCTAAAACAGTAGAAATAAAGATGAATCAGAAAAATTGCTGAAACAAAGTTATATGTAATAAGCTCTAACTGGCTCTAAACGTGCAGCTTGATAAGT # Right flank : CAGGGACTTTGAGAACTGGACCGCCGTGATTCCTTGCACTAGCAGGGTGGATGAATCTTTGTTGAAGAACGGGTTTTGGGATCTGTGTTTTCATTCAGAGAAATCAGTAAATGATGGGTCTACTAAAAAATTTTGAAAAAATTAACTTTTAATATCTATAAGGTGTATTCTGTGGAGAAAGTGCTTCCTAAGTTGGGAGTTTTAAAACAATCAGGAAGGAGTTGGTGGTGGCTTCGTTACTGGAGATCCGCTGGATTCTGGCTCTTGATACTCAAGGTAACCAGATTTCAGTTGGAATACGAGATATTTTCGCGGGGGAGGTGCAGGTTGCCTATATTCAGGGGGAGTCCCCGGCTCAAGACTATGCTGTGATACGGCTTTTGCTGGCTATTTTCTGGCGTGCCCATTCCATGGATATCGACATGGACGTGGAACCTTTTGATTTTCTTGAATGGTTCAACAAGATGAGACGTCAGCTTGCTCGAAAAGGGAAAGATCAG # Questionable array : NO Score: 5.71 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.58, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCACCAGCGGGGATGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCCAGCGGGGATGAGCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-12.70,-12.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //