Array 1 6932-4017 **** Predicted by CRISPRDetect 2.4 *** >NZ_CFSH01000069.1 Mycobacterium tuberculosis strain BIR-01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================================================== ================== 6931 29 100.0 70 ............................. AACCCAAAACCCCGAGAGGGGACGGAAACTCGCAAGCGCCGTGCTTCCAGTGATCGCCTTCTAGTCGTCA 6832 29 100.0 43 ............................. ATTTCGACGACAATTCGTTGACCACGAATTTTCAGAGTCGTCA 6760 29 100.0 1 ............................. A Deletion [6731] 6730 29 100.0 45 ............................. TTAAAACCGTGTTGCACTGCAACCCGGAATTCTTGCACGTCGTCA 6656 29 100.0 43 ............................. ATTTCGACGACAATTCGTTGACCACGAATTTTCAGAGTCGTCA 6584 29 100.0 70 ............................. AACCCAAAACCCCGAGAGGGGACGGAAACTCGCAAGCGCCGTGCTTCCAGTGATCGCCTTCTAGTCGTCA 6485 29 100.0 1 ............................. A Deletion [6456] 6455 29 100.0 48 ............................. CAGGTGAGCAACGGCGGCGGCAACCTGGCGGCCACGGGTCGGTCGTCA 6378 29 100.0 0 ............................. - Deletion [6350] 6349 29 96.6 48 A............................ TTGCGCCAACCCTTTCGGTGTGATGCGGATGGTCGGCTCGGGTCGTCA 6272 29 100.0 0 ............................. - Deletion [6244] 6243 29 96.6 43 A............................ TTCGTCGACCATCATTGCCATTCCCTCTCCCCACGTGTCGTCA 6171 29 100.0 44 ............................. TCGCGGCGCGGCATGGCACGGCAGGCGTGGCTAGGGGGGCGTCA 6098 29 100.0 42 ............................. ATGTGCGCCGTCGCCGTAAGTGCCCCACGGCCCGTGTCGTCA 6027 29 100.0 32 ............................. CTTGAATAACGCGCAGTGAATTTCGCGGATCA Deletion [5967] 5966 29 100.0 47 ............................. ATGGGATATCTGCTGCCCGCCCGGGGAGATGCTGTCCGAGGTCGTCA 5890 29 100.0 42 ............................. ACTCGGAATCCCATGTGCTGACAGCGGATTCGCATGTCGTCA 5819 29 100.0 0 ............................. - Deletion [5791] 5790 29 93.1 44 AG........................... TACACCACGCGTCGTGCCATCAGTCAGCGTCCTCCTCGTCGTCA 5717 29 100.0 43 ............................. ATTTCGACGACAATTCGTTGACCACGAATTTTCAGAGTCGTCA 5645 29 100.0 0 ............................. - Deletion [5617] 5616 29 96.6 43 A............................ TGGATTGCGCTAACTGGCTTGGCGCTGATCCTGGTGGTCGTCA 5544 29 100.0 43 ............................. ATTTCGACGACAATTCGTTGACCACGAATTTTCAGAGTCGTCA 5472 29 100.0 1 ............................. A Deletion [5443] 5442 29 100.0 44 ............................. CCGGCAACAATCGCGCCGGCCCGCGCGGATGACTCCGGTCGTCA 5369 29 100.0 1 ............................. A Deletion [5340] 5339 29 100.0 43 ............................. GCGAGGAACCGTCCCACCTGTGCCTGCCCCCAGCGGGTCGTCA 5267 29 100.0 44 ............................. ATTTTGAGCGCGAACTCGTCCACAGTCCCCCTTTCAGGTCGTCA 5194 29 100.0 1 ............................. A Deletion [5165] 5164 29 100.0 48 ............................. CAGGTGAGCAACGGCGGCGGCAACCTGGCGGCCACGGGTCGGTCGTCA 5087 29 100.0 45 ............................. ACGGAAACGCAGCACCAGCCTGACAATCTTATTCTCGCGTCGTCA 5013 29 100.0 0 ............................. - Deletion [4985] 4984 29 96.6 47 A............................ GCATATCGCCCGCCACACCACAGCCACGCTACTGCTCCATGTCCTCA 4908 29 100.0 0 ............................. - Deletion [4880] 4879 29 96.6 45 A............................ TAGTACGCCATCTGTGCCTCATACAGGTCCAGTGCCCTGTCGTCA 4805 29 100.0 1 ............................. A Deletion [4776] 4775 29 100.0 42 ............................. CTGACGGCACGGAGCTTTCCGGCTTCTATCAGGTAGTCGTCA 4704 29 100.0 0 ............................. - Deletion [4676] 4675 29 96.6 42 A............................ GCCCCGTGGATGGCGGATGCGTTGTGCGCGCAAGTGTCGTCA 4604 29 100.0 1 ............................. A Deletion [4575] 4574 29 100.0 48 ............................. CAGGTGAGCAACGGCGGCGGCAACCTGGCGGCCACGGGTCGGTCGTCA 4497 29 100.0 0 ............................. - Deletion [4469] 4468 29 96.6 44 A............................ TGGACGCAGAATCGCACCGGGTGCGGGAGGTGCAGCAGTCGTCA 4395 29 100.0 1 ............................. A Deletion [4366] 4365 29 100.0 42 ............................. CCTCATGGTGGGACATGGACGAGCGCGACTATCGGGGTCGTC 4294 29 100.0 41 ............................. TCGCAAGCGCCGTGCTTCCAGTGATCGCCTTCTAGTCGTCA 4224 29 100.0 47 ............................. ACACCGCCGATGACAGCTATGTCCGAGTGACATCCTCCCAGTCGTCA 4148 29 96.6 45 ...........A................. TTGAACCGCCCTTCGCGCGGTGTTTCGGCCGTGCCCGAGTCGTCA 4074 29 100.0 1 ............................. A Deletion [4045] 4044 28 96.6 0 ........-.................... | ========== ====== ====== ====== ============================= ====================================================================== ================== 50 29 99.2 30 GACCCAAAACCCCGAGAGGGGACGGAAAC # Left flank : CGCCCTCGACTTGCAACTGCAAAGCCTCGTGCGTGTTATCGAAGCCGGGCACCCGTCGCGGCTCGTCGATATCGATATCACCTCCGAGCCATCCGGAGCCTAAATGCCCACTCGCAGCCGTGAGGAGTACTTCAATCTCCCGCTCAAAGTGGACGAGTCCAGCGGCACTATAGGCAAGATGTTCGTCCTCGTAATATACGACATCAGCGACAACCGGCGGCGGGCTTCACTTGCGAAGATCCTGGCCGGGTTTGGCTATCGCGTCCAAGAGTCCGCATTCGAAGCGATGCTGACGAAGGGCCAGCTCGCGAAACTAGTTGCACGTATCGACCGCTTCGCCATCGACTGCGACAACATCCGGATCTATAAGATAAGAGGTGTTGCGGCAGTTACGTTCTACGGAAGGGGACGGCTTGTCAGCGCAGAGGAGTTTGTGTTCTTTTGACATCATCAGCAGGCATTGTTACCACACGCTGGACGAATTGTCCATAGAGTCGTCA # Right flank : TACGACGACTGGGTCGCCACCGCGTCTGTTGACCGGCATTCAGGATGAGCATGATGGCGGCGTTGACGGTGAGGACGTTTGGTCATGAAATGACCCCGCCGGGAGATGTCCGGCGGGGTCGGTGGTGTTCGGGGTGTCGGTGTGGTGTTCAGTCTGCCGTGACTTCGGCGATGGCGGTGCGGGTGGTGGATTCGTCGACGATGGCCTTGTCGGCGGCGAAGGCGGCGACGAGGGCTTGCAGGGCGAGGTTGTTGACCGCGCGGGGGTAGCCCCGGCTGGTCTGGTGGATCAACCCGATGGCGTCGTCGGAGAACAGGGCATCGTCGCGTCCGGCTAGCTTGAGGTGGTGGCGTAGGTAGCTGCCGGTGTTGGTGTCGGTCATGGGCGGCATGGCATATCGGAGTCCGATGCGCTGGTCAAGCGCGGCGAGCACGCCGAGTTTCATCCGCCGCCGCAGGGTGGGTTGGCCGATGAGCAGGCAGGCGAACGGGCTTGACGAG # Questionable array : NO Score: 5.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-1.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GACCCAAAACCCCGAGAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA //