Array 1 1-455 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOLH01000005.1 Marinospirillum celere strain DSM 18438, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1 28 100.0 33 ............................ CGTCTACACCCGCTAGTCGGGCACCAGTAGACC 62 28 100.0 33 ............................ TGTTAGTGTTTCAGTGTTCGCACCGCTGAACGG 123 28 100.0 33 ............................ TATCAAGAGCGTCAAGCTGGCCCGATGAACGCC 184 28 100.0 33 ............................ TGATGGCGGTGATGATGCAGCAAGCCGGACGCG 245 28 100.0 33 ............................ TGCTTACATTCGATAGTCCAGTATCTCCTGTTG 306 28 100.0 33 ............................ CATCGAAGTGCCAGTAAAACTGGTCGCCAACCA 367 28 100.0 33 ............................ CGATTAACGTCCTTGACGATTTCGTACTGAGTT 428 28 71.4 0 ................CA...C.AAGCT | ========== ====== ====== ====== ============================ ================================= ================== 8 28 96.4 33 GTCTTCCCCACGCCCGTGGGGGTGTTTC # Left flank : | # Right flank : TGGTTTGTGTTCCCTGCACCCGCGGGGCATAGCTGTGTTAATAAAAGGGAGGCTATTTATGAAGTGTGTCACTTGCAAAGTCGGTTCTACTCAACCAGGCAAAACCACTGTCCGTTTAAACAGGACAGGCATTCATTATGAATTCCATGGTATCCCTGCATTAATTTGCCAAAACTGCGGTGAGTATTACCTGGACGAGAAAACCACCAAAAAGCTTCTGGTTAAGGCTGAACAAAATCAAAGAAAACTATAAACCATTCTCCCCAACCATTCATGAATCGCCTGAGTACTTTTTCTCAGATGGTAAGCTCGTGGTATCCAGCCAATCAATCCTGGTGGTGGAGCTGTGGAAAACTCTAAGGGTGCAGGTAAAACTTCAAGTCCCTGGTTTTCAAAAGCGGGGACAGCTCTGGCCAGGTGCCAGGCATGACTAACCAAAATAATCTGGTTAATACCTTTCTGTTTTAAAAGCTCAGCTGTGAACACTGCATTTTCCTGGG # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCCCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 2108-6 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOLH01000002.1 Marinospirillum celere strain DSM 18438, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2107 28 100.0 33 ............................ TGGTTGTGGGCAAAGATGACGGCGGCAGCGTTA 2046 28 100.0 33 ............................ TTCAGAATATGATTTTACTTGGTGATAGGTACG 1985 28 100.0 33 ............................ TTAGTTCAAAAAGCCTTACATTCATGAAGCCTG 1924 28 100.0 33 ............................ CTGGTCGGAAAGCTGGCCAGGGCCACCGACGGC 1863 28 100.0 33 ............................ TCGTTTAGGCGAAGGAATTGACGGTTTAGGTGA 1802 28 100.0 33 ............................ TACACCCGCCAAGCCTCTGGATGGATTGGGAGC 1741 28 100.0 33 ............................ TCCGAGTCATTCAAGGTTCTGGAAAGGTTGCTG 1680 28 100.0 33 ............................ TCATAGGCGAGCCACTGTACCCGGTGACTGGCA 1619 28 100.0 33 ............................ TAACCGGCGGTATAGTTGATATACCGGATGACC 1558 28 100.0 33 ............................ CGGGGCGCGTGGTCGATTGTTCAAAAACGGCAC 1497 28 100.0 33 ............................ CGCCTTTCTTACGGCTTCGTCCTCAAGCTCTAC 1436 28 100.0 33 ............................ CGGCCCCGATGATTGCACCTGGGCGGTAAAGGT 1375 28 100.0 33 ............................ CGTTGCGTCCGTCACGTTGATGCTAACCGCTTG 1314 28 100.0 33 ............................ TTCGAGGCGTGGCGAACACGGAAGCGCAGGAAC 1253 28 100.0 33 ............................ CCAGGGCCTGCACACTTACTGACAACTAGTGTT 1192 28 100.0 33 ............................ TCTTCCCCACCACTTCCGGTAGGTTTCGGCCTG 1131 28 100.0 33 ............................ TGACTGAAATCCTTGTTGTTTCGACAGCCCACA 1070 28 100.0 33 ............................ CGGTTTTGCCTGGGCAGGCTGGCGCTCGACAGG 1009 28 100.0 33 ............................ TAAACGCTCCTTTAATCCGCGCATTGCAAAACC 948 28 100.0 33 ............................ TAAACACCTAGCCCCCTAGCGGGGCTTTTTTGC 887 28 100.0 33 ............................ CCAGCAGCAGAAGGCTTGGCGGCTGGCTGATTA 826 28 100.0 33 ............................ TAAATTTTTGTTCTTCATAGCAGAACCAGCCTA 765 28 100.0 33 ............................ TAATATCACTGTTCTCACTGGTGCTGTGATAGC 704 28 100.0 33 ............................ CATTTTATTAATCTGATCACAAACGGACAGGCT 643 28 100.0 33 ............................ CGCATGACCTCATCTTTTAGGTTGCGACCCTGG 582 28 100.0 33 ............................ CCAGCAGCAGAAGGCTTGGCGGCTGGCTGATTA 521 28 100.0 33 ............................ CCAAGCTCCCAAACGGCGGCCACCACACTGGCA 460 28 100.0 33 ............................ TTGGGTTGAGAGGTCTCTGCAAAGATCAGCTTT 399 28 100.0 33 ............................ CAAAATTACCGGGCATTTCAGCAAAGCCTTTGA 338 28 100.0 33 ............................ CGAGTGATCTGGCTCCAATCTATGTGAGAGCTG 277 28 100.0 33 ............................ TGCAGTGCTTCCACTGATCTGTTCTGGTTTCCG 216 28 100.0 33 ............................ TATCCATTGATTCAAAGTCTGCTTTCCAGCAGC 155 28 100.0 33 ............................ CGTCACGTCGCGCCGTGGCTTGTACGCAAATGT 94 28 100.0 33 ............................ CAAAGCGCTAGCTGGCACGTTTAAGCAAAAAGA 33 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 35 28 100.0 33 GTCTTCCCCACGCCCGTGGGGGTGTTTC # Left flank : TTTATAAGGAGCACCTGTGTATTGATCTAGCTTTTATGCTGACCCGTGATTTGGCAGGCCGATATAACAAGCAAAAAGTTGCTGCTGCATTCCGTGAACGGGTCATTAAAATGGATTTTCTTGCACGGCTTGCTGATGACATAAATGAAGTTCTGGGGGTGAAGCGTGCTCGTAGTAGTCGCAAATGATTTGCCGCCAGCTGTACGCGGCCGAATGAAGCTTTGGTTTGTGGAACCCCGCGCCAATATTTTTGTATCAGGTGTCAAAGACTCAGTTGCCAAAACAGTAATTGACTACCTGTACAAGCACTGCCCACCTGAATCCGGCATCGTCATTTTTCGTTCCTTGCCAGGGCCACCTGGCTATGAAGTTCGTACTATCGGCCCTACCCGAAAAGCGCTGACAGAGATCAGTGGCCTACAGCTAGTCATCGAAACCCTGAAAACCCAATAAATCGAATATATTGTGTTTTTCTTGGGGCTCTTTAACAATATACTGGT # Right flank : CTAGAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCCCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [5.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //