Array 1 601821-603652 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP015496.1 Lactobacillus helveticus strain FAM8105 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 601821 32 100.0 35 ................................ ATTGATAAAAGACTGATACATGTGGCGAGTAACCT 601888 32 100.0 35 ................................ AAAGACGTGTGAATGGTCAATGGATCTTGTACAAG 601955 32 100.0 34 ................................ GTATTCCAGCCAAAGCAGATGGCTTTGCCACCTA 602021 32 100.0 35 ................................ ACCGGTGAATCGTAAATGTTAATCGAGCCACCAGC 602088 32 100.0 34 ................................ ATATGAATTCCTTGGCTAGGGCTTTGAGCACTGA 602154 32 100.0 35 ................................ TTTCTACTGGTTTACCATCTGGGTTTCCTGATCTT 602221 32 100.0 35 ................................ TGCAGAAGGTTAACAAACTTAAGCCAGATTATCTT 602288 32 100.0 35 ................................ AGTGACGTGCCATCAGTTAACCAAAAATGTACCTA 602355 32 100.0 34 ................................ CATTGACTGTTAGTGTCAATGAGATGGATTTAAA 602421 32 100.0 35 ................................ AATTAAGTATAATCATAGGGGCAATAATTGCTTAT 602488 32 100.0 36 ................................ ATTCAAAGGAAGTGGTTTAAGAAGTGAAAATTGATC 602556 32 100.0 35 ................................ ATAGCGCTATTAACAAACAAGTTATGCAACCGCTT 602623 32 100.0 34 ................................ TTTTGACTTTTGCTTGTTACGACTAATCAGGAAA 602689 32 100.0 35 ................................ AATCTATGTAAATAAGAAGTGTCAGAAGTTAAGCC 602756 32 100.0 34 ................................ ATATGCGTCAGTTTCGCTTTCATGGTTAAAGCAT 602822 32 100.0 35 ................................ ACTAATGGAATATCCTTCATGCGCAAGCCTGTAAA 602889 32 100.0 34 ................................ TTTAGTGAACAAACTCCGTTGCGATACCGTCACT 602955 32 100.0 35 ................................ TAAAATACAGTTGACTTTTTAGAAGATTTAAGTAA 603022 32 100.0 35 ................................ TAATATCTGTGAAGCAAACAAGGATCACTTCCTTG 603089 32 100.0 34 ................................ TTAAACGCCTACAAAGAACGTCACAATGCAAACA 603155 32 100.0 34 ................................ CCATTAAATAATCATTACTTGTATTAAATAAAGT 603221 32 100.0 36 ................................ GTTTTCGGGTGTCGGGTTTAATGGAGTGGTATCGGC 603289 32 100.0 34 ................................ ATCAAAGCTATCCTGCTATTGCTGATGGCTGGTG 603355 32 100.0 34 ................................ AGTTTTTGAACGCAATTCATTACCCGGTTTTTTC 603421 32 100.0 34 ................................ ACTAATGAAGTAATCAGTAAGGTGTTGGGTTACA 603487 32 100.0 35 ................................ TACTTAGATGCTGAAATGAACTTAGACCCGTGGAT 603554 32 100.0 35 ................................ AAGGATATTGACGGTACTGTGTTTGAAGTTTTCGG 603621 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 28 32 100.0 35 GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Left flank : GGAGATCTTGACGAATACCCACCGTTTATGTGGAAGTAGGTATGCAGCATGATGGTAGTAGTTAGTTACGATATTAATACGGAAAGTAAATCTGGTCAGCGAAGGTTACGTCATGTAGCCAAAATATGCTTAGATTATGGACAACGAGTTCAAAATTCCGTTTTTGAATGTAAAGTTAATTCGATGCAATTAGAGTTGATGAAAGAAAGACTACTAGACGAAATCGATGATAGCCAAGATAGTTTGTATTTTTTTAATTTAGGGAAGAATTATAAAAATAGAATTAAGTCATATGGAATTAAAGAGGTTATAAATTTAGAATCGCCTGTAATATTTTGATATCGGTGCGAACTGTATGTGAACATGCTTTTAGGGAAGATTCGCACCAATTTTAAACAGGTGAAAAGTGATCTTTTGATAAAAAATATATTTTTATCAGGGTAAGTTAATTTGAAGCCCAATATTTAGAAATGAATTGAAATCATGATCTAAATATTGCG # Right flank : TTTTAGGTCCATTGCGCTCTTGCCAGTGAAGTCGTGTCGCACTCCTTGTGATGCACTTGTGGGTGTATTAGTCGGCTTCTTCAACCCAGGCTTGAAGTACTAATTATTAAGAGGAGATTATTCAGATGACAATCGAAGAGATGCAAAAAGGCTATCAAAATGAAGTTGCTTATCAAAAACATATGCTTCGCAATCTAGGCTATTGATTCCAACTCTTTTTAACAGTTAGTGCGATTGGTTTGGTTTTAATTTACTATTTCCATCAATCAACTATGTGGCTCTTTATAATCGGAATTATTCTGATGGTCGCCTGTGTTTTAGGAATGTTTGCTTTTGGCTATGCTTCTTGGCGCGGACGGCAGAATGTCACTCTGGTAATCGAAGACTATGAGAAAAAGATTGCAGAAATTAAAAAGTTAGATCAAAATGCTTCCGGAACGGAAAAGATCCGTTTCAAATGATTCTTATATGAATAAAACAATTTCCCCTTCTCTAGAAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.50,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //