Array 1 361898-358105 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCXZ01000032.1 Bifidobacterium pseudocatenulatum strain CA-B29, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 361897 36 100.0 35 .................................... TATCTGAGCTACGCCTACCATTTCTGCGAACAGCA 361826 36 100.0 36 .................................... CAGCCGGACGTGGAGGAGGTGGACGCTCTGCGCCGG 361754 36 100.0 36 .................................... TTGACCGTTTTTCCGAGGAGGGCACCAAGACCAAGC 361682 36 100.0 37 .................................... AGGCCGATAAGACGCTGGATAAGTACCCCCGTGAACT 361609 36 100.0 37 .................................... ACGCCGTCAGGCCGCGGTAGTCCGGCGCAAGTGACAT 361536 36 100.0 37 .................................... GTTCTAGAGAGGGCTGCGGAAAAACCGTCCGATATGG 361463 36 100.0 38 .................................... CAGATCACCCTCAACCCACTCGACCTCATCGAAGAAAG 361389 36 100.0 35 .................................... GTCTCCAACATCATGGCCCTTGGCACGCTGTTCCC 361318 36 100.0 36 .................................... GGATCCGGCTGGTATGCGGCGGCGCAGCGCAACGGC 361246 36 100.0 38 .................................... ACGGAAAAACAGTTGAACCCCAACTCGTATGACGTGAC 361172 36 100.0 36 .................................... GGGCTTGATGTCCTGCCATCCATGTGCGCACCAGAC 361100 36 100.0 38 .................................... ATTATCGGACAATGGATACACGCTTGCGCAAATCGAAA 361026 36 100.0 39 .................................... ATGCCGCGCCTGCTCGCGCTGCCCGACGCGGCGGAATGG 360951 36 100.0 38 .................................... TTCTTTTGATTACAGTGGATTAACCGCAAAAGAAAAAG 360877 36 100.0 36 .................................... CGGCGGGTGAACGCGGCCGCGAGGTACATGGCGCTG 360805 36 100.0 38 .................................... GACGGTTGACGTGCGCAAATGGCTCAACGCGTTGGGCG 360731 36 100.0 36 .................................... TTCGCGAAATAGGGATTGGCTTTCTGTACGGCGTTA 360659 36 100.0 34 .................................... ATGCTATTGCAGTCAACGTCGATGGCCTTACCGT 360589 36 100.0 35 .................................... TGGAACGGCCCCAACTCCGGCACCAGCAACTCCAG 360518 36 100.0 35 .................................... GTTCAGGAAGCGGTGACCTTCGGTGATGTTGGCGA 360447 36 100.0 36 .................................... TAGCCCCCTCGCGCCACAATTCGCACAGCATATTGA 360375 36 100.0 38 .................................... GCCATCAAAGACAGTATGGCGGACTACACGTTGACCTT 360301 36 100.0 34 .................................... CTCAAAGCAAGGCAGCAGGCGTGCGATACGATTA 360231 36 100.0 37 .................................... TCGGCATGAACCGATATCAAGGGTGGAGGGATGACGG 360158 36 100.0 35 .................................... AGGATCACCGTGACGATCAGCAACAACTCCACCTG 360087 36 100.0 36 .................................... ATGGCGCAGAAATACGGATGCCTCGACCAAGAGACA 360015 36 100.0 35 .................................... GGTCAATCAGCGCCTGCACATCGATGACCCCATCA 359944 36 100.0 34 .................................... GCGTAGATCCTTGCGGCCACGGCCTCGTACTGTT 359874 36 100.0 36 .................................... AGTCTTGACGGCGAGCTGGACGAAGAGGCCGATGAA 359802 36 100.0 35 .................................... ATTCCAGCGCGCAGGAGGCGCCTCGGCTCATTACG 359731 36 100.0 38 .................................... CGGCACGGAAGACAGGACGGGGCACGTCAGGCGATCGG 359657 36 100.0 37 .................................... GGGGCGTTTTCGGTGGTGTCAAGTCAGTCGCGTCCGA 359584 36 100.0 37 .................................... CGTCCACGCGACATGTAGGATGGCCATTCGTTATCCC 359511 36 100.0 36 .................................... GAAACAGGCGACCTAGCAGACCTACGCGACGGTTAT 359439 36 100.0 35 .................................... CACCCTTGACCGCGCAGACGGCACACCACGCAATC 359368 36 97.2 37 ........................A........... TCCATGCTCATACCGGTGGCCGGCAGCGTGTCGCGGG 359295 36 100.0 35 .................................... ATGGTCTCTGGCATGAGACGCGGCCTGTCGACCTT 359224 36 100.0 36 .................................... GCTAAGACTGGCGAGGAAGTCGTGGAAGACTGCAAG 359152 36 100.0 37 .................................... CCGACCAGCCGGGAAGCCGTCCAGCAGACGAATACTG 359079 36 100.0 36 .................................... CAGCCGCAGCTGGCCGCAGCCGTCAAGGGCGCGACC 359007 36 97.2 37 ...................................G CTTGGAGACGATGTCTACGGACGTTACTCGCTGCCAA 358934 36 100.0 35 .................................... ACGTCATCGTCGTGGATTATTCGTTTTTTGAGCCA 358863 36 94.4 37 .GC................................. GCTAACGAGAAGGTGCAGGAACTGGCCCGCAGCGGAC 358790 36 100.0 37 .................................... CGTGTGTATCGGTGAGTGTTAGTCACCGTCCCGTTAT 358717 36 100.0 35 .................................... TCCTCGAGCGCGTTCGCCGTCGCCTCCTCCGTATA 358646 36 100.0 35 .................................... GTGAACGTGCCTGACAGTACGACGGCCGTGGAATT 358575 36 100.0 38 .................................... CTAAGGCCGTTGTGGAGCTTCTCGGTGCGGCACCACAG 358501 36 100.0 35 .................................... AACAAGAAATCAGGCGGAATGGAAGCCACGTTCAT 358430 36 100.0 37 .................................... TAATTCTTTCTGCCACCGCCCCGTCAGAAAACTTGGA 358357 36 97.2 36 ........................A........... CTGCCCGTGCCTGTTTGGGTCAACGCGTATGCGCGA 358285 36 100.0 36 .................................... GAGCTCGTCTTCCGGCGTCAGTGCTTGTTCGTTGCG 358213 36 100.0 37 .................................... GGGGACAATGACCCCGCTGATTTGAGGGACGGGTATA 358140 36 94.4 0 ..................................AG | ========== ====== ====== ====== ==================================== ======================================= ================== 53 36 99.6 36 ATTCCTGAGCTAATCAGCTCAGGACTTCATTGAGGA # Left flank : GATGATAGACGTCGTGATCACGTGGCAAAAATATTACGGTGCTATGGCGAGAGGTTGCAGTATAGCGTGTTCTTTCTGCGGATTCGGCCTGCAAAAATGCTGGTTGTCCAGAATCTAATAGAAGTTGAAATCGATGGTTCAACGGATTCAGTTGTTGTCTGTTTTCTCGGAAAAGAAGAGCAGGCAAGAGAGGGAATGTCATTCTTGGGACGACGGGAATACAGTGATTTAACCATTCCGACGGTTATCTGATTTCACTTTAACCTCTCTGATTGTCTTTCACCTATGTGATTGTGGCTTGATAATTCAAAAGGTTTTTTATGAATTTTGGAATACGAGAGGTGAATCATTGCTGCGACACGCGATGACCTCTCGCATGAGGAAATATAAGGGTTTATGTCTCTTTTTCTGGTGATAAACTGACTGGAGGGAGAGGTATCTGTTCCGCTCTCGCAAAGTTTTTAATTCGCTTAGTCATTAGAGCGGATTAGAATGAGACC # Right flank : TCTATTGGCTCTGATTGTCGTTGTGCGCCCTGGCTTGTGAAGCCGCTTTCTGAATTAGGAATAGCTGCTATCAGGGAGGGCAAGAGAACTATGTCAAATTTGACGTAGATTGTGGCATTTTCTGTGGCCAAGTTCATCCTTGATGAAAGGATTTCTACTTGTAATGTAGTATTGGTGCGTATGATGCTGAGAATTGACGAGCGCGATTTGAGGTCGAAGCTCAATGAGCACAGGAGCCTTATTGGATATGGTTCCAAGGGCGACGGCATCGCCAACATTGTTGCGGGCCTATTCTATATTCCAACAGCATGGACGTTTGCGGAATTGCCGATGCGGGCGCGATGCTTATTTGCTGTGCTGGGTGTTGTGATAATCGCGTTGGGTGTCGCGAGTATTGTATGCAAGGGACTCACTTCCGAAAAACTATATAAGGAAATCGAATCGATGAACAGAAGAGCTAGCTCTCTCATTGCGGTCAAGGATGGCATGGACGCGCTGTC # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCCTGAGCTAATCAGCTCAGGACTTCATTGAGGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.00,-7.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //