Array 1 176562-173168 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAORV010000001.1 Acinetobacter baumannii strain SP4956 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 176561 30 96.7 30 .............................G TTGGCGGTGGTGGTGGCGGAACTACCGATG 176501 30 93.3 30 ............................GA TGTTAAGCCTGTTGTTGATGCTATTGAGAA 176441 30 96.7 30 .............................A GATGGTTAACGTTATTAGAAAAACATCGTC 176381 30 93.3 30 ............................GA TCGCTGTAACCATTGCAGTACCATCAGTTT 176321 30 93.3 30 ............................AG ATTGCGGACATTTAGTCTGCTGTATTTCTT 176261 30 93.3 31 ............................AA ATAATCATCATATACCCCCTTGTCAGAGTGT 176200 30 100.0 30 .............................. TAGCTTTAAAAACTCTTCGCGAGATTAAAT 176140 30 100.0 30 .............................. TGGCTGCAAGCGGAACCATAATCCATGCAG 176080 30 93.3 30 ............................AG TCGGCACAGGTAGCAGTTGAGCAGTCATCG 176020 30 93.3 30 ............................GA GTTCTTTCATAACGTAGGCTTTAATGCCTG 175960 30 93.3 30 ............................AA CGTTTCCGCAAATCTGCGAAATACTCGTTG 175900 30 93.3 30 ............................AA TATAGTGGCATCTTCGAGAGTTAAAGGCGG 175840 30 96.7 30 ............................A. CAGAATTTTGTTTACAAGTTCTAAGCGGGA 175780 30 93.3 30 ............................AG TTTGAACATCTAATAATTGAGCTGTAATAC 175720 30 93.3 30 ............................GC CTCCAATTGATCCAATTGATCAACCTCCAT 175660 30 96.7 30 ............................A. ATGGTGGTTGTTATAAACCGCCTAATGATA 175600 30 96.7 30 ............................A. TAGAAGACGTGGACTCCCCCAACCTTTCAA 175540 30 100.0 30 .............................. TGCGCTCTTGCGGTTATTATCAAAGACCTC 175480 30 93.3 30 ............................AG CATGTGCTAAATCAGGGAAAAGAAAAGCCA 175420 30 96.7 30 .............................A ATTATAATCGCAATAGCTTCAATACTCCTA 175360 30 93.3 30 ............................AG TGCGTGAACATTATTCTTTCTGCATCAGCT 175300 30 93.3 30 ............................CG GTACGTTCAACGGTCAGCAGATTTGTGTTA 175240 30 96.7 30 ............................A. TAATAGTAATCGTAGTGGCGGTGTGTCAAT 175180 30 100.0 30 .............................. AACTTGCTTACGGCCAACACCTGTAATCAA 175120 30 93.3 30 ............................AG CCAACTTAATAGTAGAAAGGTAATGCCCTT 175060 30 96.7 30 .............................A CCAAACCAATCAGCAATGGAAAAACCACCG 175000 30 96.7 30 .............................A TAAAACGCGCAAAAAAATATAAGGGACGTA 174940 30 100.0 30 .............................. AAACTGATTTACAAGCTTGATCAGTAGGCC 174880 30 96.7 30 ............................A. CATGAAGCTTATTAAATGACTGACATGGCT 174820 30 93.3 30 ............................AA AGATTCTAGCCCCCTCAATTGAGAAGTTAT 174760 30 96.7 30 .............................A TTTAGAAAGCTTGGAAAATAAAGGTGACTG 174700 30 100.0 31 .............................. TGCCGATGCGTGCAAACATTTGCTCCGCTTC 174639 30 100.0 30 .............................. ATAGATGGCTTTAACTGACTCCCAGCCCAT 174579 30 96.7 30 .............................A TAAGAAAAATGCAAAAAAGGCATTTATTAG 174519 30 96.7 30 ............................A. ACACATGTTTTTCTAATAAGAATAAGACAA 174459 30 100.0 31 .............................. ACCAGATAGCAACTCTCTAGGTCAGATAGAC 174398 30 93.3 30 ............................CC AGACTTGATTTTTATCACCATTGAAGAGTT 174338 30 96.7 30 .............................C AGGTAATAAAAAACCGCCCGAAGGCGGTAT 174278 30 96.7 30 .............................C AAAACGTATGGGTTATTGATGCTCAAGATT 174218 30 96.7 30 .............................C GTTGCTACGCGCCACGGCGCACCCATCGTT 174158 30 100.0 30 .............................. GAATCGGCCGCTTTGCGTATAAACACCACC 174098 30 96.7 30 .............................A AAATCACATCAGGGAAGTGAAGGCGAGCTA 174038 30 93.3 30 ............................GA GAATGATTTAAATTGCATTAAGCCTTTAAA 173978 30 96.7 30 .............................G GAAGTCATGAATGTAGGTGTTGAGGATGGC 173918 30 93.3 30 ............................AA TAGAATTAAAACCACGTTGATAATATAGGT 173858 30 93.3 30 ............................GA ATTGCACTTGCTAAGCCAATAATGCCAACT 173798 30 93.3 30 ............................GA CCCATAAATCAAACAAGCCAACATAATTGA 173738 30 100.0 30 .............................. CCTCAACTGACATTTCCAAATAGTAGAGGC 173678 30 96.7 30 ............................A. AAAGCGCACAACCCATTGATTTGTATTTTT 173618 30 93.3 30 ............................AG CAAATAGATCAACTGGTGCGCCCTGTGAAT 173558 30 93.3 30 ............................GA GATTCAAGTTTCACCGGATGGCACAAGTAA 173498 30 96.7 31 ............................G. AAAAAAGAGCATTTCCAGCAAAAATTGACGA 173437 30 100.0 30 .............................. TAAAGCTAAATGAGGGTTAAACCTAAGAAA 173377 30 90.0 30 .......T....................AA CGTGAACAATTGTTTTAGCTTTGAACATTA 173317 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 173257 30 86.7 30 A......A.........T..........A. TTTGATCTTTACTTATTCTCGCTTCAAACA 173197 30 73.3 0 .......A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 57 30 95.2 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAACC # Questionable array : NO Score: 5.26 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.24, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //