Array 1 5418517-5416749 **** Predicted by CRISPRDetect 2.4 *** >NZ_VFMK01000001.1 Serratia fonticola strain 119RB Ga0299866_11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 5418516 28 100.0 32 ............................ ACATGTTCCTGGCCGCGCTCTGCCGCCCACCC 5418456 28 100.0 32 ............................ ATTTCACGGCTACGCCATCCCTTCGTCGCTAA 5418396 28 100.0 32 ............................ AACTGGGAAATGCCGTCGGTACCTACCGGGAA 5418336 28 100.0 32 ............................ AGAATGGATATTGAAAACGTTAAATCTTAAAT 5418276 28 100.0 32 ............................ GCTTAGCACCACTGGCAACAGCACGCTGCAAA 5418216 28 100.0 32 ............................ AATTTGTTTGAACGGAGATTGCGGTGAGCCCT 5418156 28 100.0 32 ............................ ATATTCCATCTATTCCGAAGGCCTTACGCGTA 5418096 28 100.0 32 ............................ AGTGATCGCACTGCTAAGACTCAAATTATAGC 5418036 28 100.0 32 ............................ GCATGCGGCCAGAAATAACTATTTCCATTGAC 5417976 28 100.0 32 ............................ CATGAATTACGCTCAAGCCATTTTGTAATAAC 5417916 28 100.0 32 ............................ TTCACAATCGATAAAATTAGAACCCTGACTTG 5417856 28 100.0 32 ............................ AGTCCGCTGCCAGCAACACCGGCAACCGCTCC 5417796 28 100.0 32 ............................ CCAGTCAGTAACCTGCTTGCTCCATGCTTCAG 5417736 28 100.0 32 ............................ TCAATAATTCACTATGAGCAGTATAATGGGGA 5417676 28 100.0 32 ............................ AATCACATGGTCATTGTCACAATGCACTAATC 5417616 28 100.0 32 ............................ TCTGGTACTAATGATACCACATCGGTATGTGC 5417556 28 100.0 32 ............................ GGAAAGCCAATCAGGAACGGATGAAAAAAATT 5417496 28 100.0 32 ............................ TCACCAGTCTGGTAGTCCACAACCTGCGTCAG 5417436 28 100.0 32 ............................ CGCAGAGAGCACACCCGGATTGATTTTCACGT 5417376 28 100.0 32 ............................ ATTTGCGGCAGAAAAATAACCCGCCGCGCGAA 5417316 28 100.0 32 ............................ ATCGATGGGGATTTTGGGTAAAAAATTTCAGT 5417256 28 100.0 32 ............................ GCAAACGCCTATTTCTTGTTGGCCGGTGCGAT 5417196 28 100.0 32 ............................ ACAACGCCATACCTCAGCAGAAGCGCCACCAG 5417136 28 100.0 32 ............................ AGCGAAAAACAGGAGGTAAGCGCCTGCGCTAG 5417076 28 100.0 32 ............................ TTGGAAACCCGGTAAACACTCAGGATGCAGCC 5417016 28 100.0 32 ............................ TCTCTGGCCTCTGCCCACAGCTGTAAAACATC 5416956 28 100.0 32 ............................ ATCATGGTCACCAGCCTGGAAAACCTGTCCAT 5416896 28 100.0 32 ............................ ATGGGTTGCCGGGCAGATCGTGCGTCAGTCGC 5416836 28 100.0 32 ............................ AGTTAAAAAGGCGGTGGATGCCGCCGTAACAG 5416776 28 89.3 0 .....................AC.A... | ========== ====== ====== ====== ============================ ================================ ================== 30 28 99.6 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GGCGCTCACCGCCTTTGAGTCTTTATCATGGCGTAAGGGGCTGCGGGATTACACTGAATGCAGCGAAATTCAGCCAGTACCCGCTAATGTAAAATATCGAACAGTACGCCGCGTGCAGTTTAAAAGTAATGCTGAGAGATTGCGGCGTCGTTCTGTTAGTAAAGGGTGGATCACCGAGGAAGAGGCGCGTATGCGTATTCCTGATTCGGTAGAGAAACGCACTACGTTGCCATTTATTCGTTTAAAAAGCCTTTCTAGCGAGCAGACATTCTTACTGTTTATCGAACAAGGCAAGATTTGCGATAACGCAACTGAAGGGATATTCAGTGCGTATGGTCTTAGTGCAACGGCAACCATTCCATGGTTTTAACCCTAATTTATTGGCTGATTCTAACTTATTGATTTAAAAGATTGGAGTCGGCCATGTTCAGAATAGGGTTTTGGCGCGTATTTCCATAGTATTGCTTTAATTAACAGTGTATTAGTGTTGATGCGCAACA # Right flank : TGTTCAGTAACTTCACCGCCAAACATAGGGGTAAGATACAGGGAGCGAACAGGAGAACTCACGTTGAACCAGAGCGAAGACCAACTGCATATTATCCGTTTTCTCAGCAAGCAGCATGTGCTCACACTGTGCGCCGGTCATGGCGCGGCGATGTGGTGTGCCAGCTGTTTTTACGTGTTCGATGCCGAACGTATGGCGCTGTGGCTGATGACTGAACCGCATACCCGCCACGGTGAGCTGATGCAACAAAACAGCCAGGTTGTTGGTACCGTTGCGCCGCAGCCAAAGACCATCGCGCTGATTAAAGGGGTGCAATACGCGGGGGAAATCACCTTGCTGGAGGGCGATGACGCGCAGATGGCCCGTGCGCGTTACTGCAAACGCTTCCCCGTTGCCAAGGTCATGAAGGCCCCGATTTGGCAGATTGCGTTGCAGGAAGTGAAGATGACCGATAACACCTTGGGCTTTGGCAAAAAGCTGCATTGGGTACGCTGATGATC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 5428262-5427453 **** Predicted by CRISPRDetect 2.4 *** >NZ_VFMK01000001.1 Serratia fonticola strain 119RB Ga0299866_11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 5428261 28 100.0 32 ............................ TCATCGCATAGTGCATTTGGATTGCGGAGTTT 5428201 28 100.0 32 ............................ GCTATTGCCACGCGGTACCAGTACCTGGACGG 5428141 28 100.0 32 ............................ AGGATAGCTGGCGTCAGCCCTCAATCTGTCAA 5428081 28 100.0 32 ............................ CTCAGAAAGCGAATTGAGCACACCCGCAGCCA 5428021 28 100.0 32 ............................ CGGAACCCTTGCCAATAGAGATACATCGCCTG 5427961 28 100.0 32 ............................ GTCATGGTGCGACTCAGCAACGCGCAGACCAA 5427901 28 100.0 33 ............................ CTGCAAGCACGCCGGCTTCATTACCCCACAACG 5427840 28 100.0 32 ............................ CTGGAGAAAATGGTGTTTTGACCTATGCCAAC 5427780 28 100.0 32 ............................ ATTAAGCCAATCATGCTGCTCTTTGGTGAGGT 5427720 28 100.0 32 ............................ TTGCCAGTTACCGTTACCCACACTAGGCAAAA 5427660 28 100.0 32 ............................ CGTAAATAGTTCACACTTTTTCGATAGCTACC 5427600 28 100.0 32 ............................ ACATCATTGTCGTTAACTACAGCGGCGGTAAG 5427540 28 100.0 32 ............................ AATACCCGGCATCCTTCTCGAAATTCCAATAA 5427480 28 85.7 0 ....................GC..C.G. | ========== ====== ====== ====== ============================ ================================= ================== 14 28 99.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TTTGTCTATGTCGACCGTGACGATCAGGGGAACGGCACACTTGCCCGCACAAGAAAGAAATCGTTTTATTGGTATAAGAAGGTTATCGCCAGTAACGGTTCAGATCTGAGCTAGTAAAAAAGGGAATACCTGCCTGGTGCGGTATTCCCAAAGAGAGATGACAACGTGTTTTTTTAACTTGAGATATCCAGGCCTGCCGCCCCGAGGGACGTTCCGCTGGCTTACGCCACGACGACCCCATCGCTACGCTCTTCCTAATATCTGACTTTGTCAGCAGTGTGAGGGAATGCCCGCTTTATGCGGCATTTCCTTTTCTTTTTGGGTGGGGAGACAAGCCGGTATTTGGCAGAGAAAGAGCATATCCGTTGTTAACCCTATTTTTGCCTTGTTATTTAATTTATTGATTTTTAATGGTTAATTTTCTTGGTGTAAAAAAGGGTATTTTGCCTTTTTAACGGAAGACGCTATGCAGATCAGGTGATTAGCGCTAGTCTGTAACG # Right flank : TCACCAGGTATATCCGATGACTATTTTTACCACTGATAATATTTATGTATTATTTTAATTTAATTATCATTGATTTTAATTAATTAAAATTTAACATTCATCAAGTTATTCAAAGGGGTAACTGTGCTAAAACAACAAGGGGAACGTTGGCATCTTGCGTGAAAATTCACGAGCTGGATGATTTTATGACATAAAAATAGGGATATTGCCCCTTTCATGAATAAACAATTCTCGCCTTCAGATTTAAAAACTATTCTGCATTCAAAACGTGCAAACATTTATTACTTACAATATTGCCGTGTATTAGTGAATGGCGGGCGGGTGGAATACGTCACTGATGAAGGCAAGCAATCGCTATATTGGAATATCCCTATAGCCAATACTTCAGTCGTTATGCTGGGGACCGGCACCTCGATCACCCAGGCAGCAATGCGCGAATTTGCCAAAGCAGGCGTATTAATCGGTTTTTGTGGCGGTGGTGGCACACCCTTGTATGCCGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 5438513-5436383 **** Predicted by CRISPRDetect 2.4 *** >NZ_VFMK01000001.1 Serratia fonticola strain 119RB Ga0299866_11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 5438512 28 100.0 32 ............................ AAAGCCAAGCATCAAAAATGCAACCGGGGGTA 5438452 28 100.0 32 ............................ GCTGACTATATCCCGTCGCTGCTTGCCTCATA 5438392 28 100.0 32 ............................ ATTTTCAACAGTTACATCACCAGTCACAGAGC 5438332 28 100.0 33 ............................ CGTATGGACGAAGATGAATTCCAGCAACTCTAC 5438271 28 100.0 32 ............................ TGTACGGTGATACGCAGCGAGTGTGCGGATAC 5438211 28 100.0 32 ............................ TAATTCAGTGAGAGGAACGTTTTGCGATTGCC 5438151 28 100.0 32 ............................ GGCTCGCGTGAACGCTTCCGGCGATGTTCAGT 5438091 28 100.0 32 ............................ AATACACGGTCATTTATACGGATCGTCACTGG 5438031 28 100.0 32 ............................ CGGCCCGGACGCACCGACAGCGGCCGTTGGTT 5437971 28 100.0 32 ............................ ACGGGTGACAAGCCCTTGAAAAATGCGACGGT 5437911 28 100.0 32 ............................ ATTAATAGTGCTCAATCTAGTGTTTGCATACG 5437851 28 100.0 32 ............................ CTCGTTTCTGCGTTCCCAGCCCCGAGGATTTG 5437791 28 100.0 32 ............................ AACAAATAGCGAAAACGGCTAATCTTTACAGT 5437731 28 100.0 32 ............................ TGCTTGGGAAGGTAACGCGCTGGAGGAGTTTC 5437671 28 100.0 32 ............................ TATGAGATTGGGGTGTTCTTCAATGCCCTTCA 5437611 28 100.0 32 ............................ AGAACGCCGGGATCACTGCACTACAAACGCTA 5437551 28 100.0 32 ............................ ATGAAAAGCACATTTCTTTTTTGATGGATAAC 5437491 28 96.4 32 .............T.............. ATCATATTCGCACTGGTTTCACAGCGTTTCGC 5437431 28 100.0 32 ............................ AAGTTCCGTACTGGGGCCACCGGGCAGGAATG 5437371 28 100.0 32 ............................ GTTTGGCCGCAGGAAGTTAATTTCCTGTTTGA 5437311 28 100.0 32 ............................ AGCAAGAACGTTGGGGGGCGACGCCCGAGGAA 5437251 28 96.4 32 ..........A................. GACCACGCTTACGATGAAATCACCGGCTTTCA 5437191 28 100.0 32 ............................ ATGCGCGCCAATGGCCTCCGTGATAATCTGCA 5437131 28 100.0 32 ............................ GCGACCAGGGCCGTGCTCTAAATCATGAAAGA 5437071 28 100.0 32 ............................ AGATACCACGCGCTCTGCGTAGCGAAATCCAT 5437011 28 100.0 32 ............................ AGTCACCGCCCCACTCGATCGGGATATGTAGC 5436951 28 100.0 32 ............................ AGCGGAAGATCTGCTGCTTGTTGTTGTGCCAT 5436891 28 100.0 32 ............................ GCAAAACATCGGCCTGTTTCCCGCCGCTGTTA 5436831 28 100.0 32 ............................ CATAACGGACAGTTGTTCATCCATTCCAACCC 5436771 28 100.0 32 ............................ ATTTTGGAATATTCCACTTTTGGCTCGGTGAG 5436711 28 100.0 32 ............................ TCGATCTGCTTAACGGCGTCACCCGGATGAAC 5436651 28 100.0 32 ............................ CGTCTTGGCGCCCATTTTGTGATTCTCCGGTG 5436591 28 100.0 32 ............................ TCTAACATGCTGGAGAGAGTGATGATTATACC 5436531 28 100.0 32 ............................ TTTAACTGCAATCTTGTTCAAAAGCGCACTCT 5436471 28 100.0 33 ............................ CTATGGCCGCCATTTCTATGCCGGTAATGCAAC 5436410 28 89.3 0 ....................A.A.A... | ========== ====== ====== ====== ============================ ================================= ================== 36 28 99.5 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGGCTTGGGCAAACTGGTCACCGAATGCTTGCGCAGCGTGGAGATGATCTACCTGACGCTGTCATTTATCACCACGCCGGTGTTTTACCTTTCCGGCACCATCTGGCCGTTGCAGGCGATGCCGCAGTGGGTCAGGGCGATTTCCTCAATGATCCCGTCAACCTGGGCCACCAAAGCCATCGCTGGCGTGAATCAGATGGGCCTCTCGTTGCGTGATGTCGGTGGAGATGTGGCAATGCTGCTGCTGCTGGGGGCGATTTATACGCTGATAGGCATTGGCGTTGGCGCCGTACGCAACCGCGTGGGGCTGCGCAGCTTATTCCGTCGGCATCGGGGATAGAATTGGCTCTCTTTACGCCATAAGCATGCGAACCCTTTTTTTTGCCGAGATAATATCTTACTGATTATTATCAGATTTTAAGGTGGGCAGTAAAAAAGGGTTTTCGCTGTATTTTGGCGATGTCTCTTCAATAATCATGCTGTTAGCGTTATTCTCTAAC # Right flank : TAATCACCCAGCAGAACAATAAAGCCCCAGGCCTTATTGCTCTGCAAAAGATAATTTATTGCACCAACTCCAACCCGGCCACGCGCCGCCAGTAACCATTGCATTCGGCGTGGTGGGCTAATGCCAACGGCTGTGCCCCTTGCTCGTTAGCGCGGAAACTATCAATTAACGCCAGAGTATCTTCCCCCTGCGGCGACAGGCGCACGATATCAACCAGCCCCTGCATGCTGGTCAGTTCGTTACCCAGGTTGTAGCAGTAACCGCTCATGGTCTGAATGCCATTGAGTACGAACACCTGCTGGTTCTCCTGCGAGTTAACGATGCGTCCCTGAGGATATTTGATACAACAGGTCTCGCATTCGTCCTTACCTCGGTTTTCTGAGCGGGCGGTAAAGCAACGCGCCGAATAGGCCAAGGGCAAATGACCATAGCTCAACACTTCCACTTCAAACCCCTGGCGGAAGCCCAACTCCTCGCATTGCTGCAATAAATTGACCAGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //