Array 1 1510736-1500014 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG663535.1 Bifidobacterium angulatum DSM 20098 = JCM 7096 strain DSM 20098 Scfld0, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================ ================== 1510735 29 100.0 32 ............................. GCGGCGATACACACCATAGACGACACGCTGCT 1510674 29 100.0 32 ............................. ATGCTCTCAATCTTCAAAAAAGAGAATCTCTA 1510613 29 100.0 32 ............................. CAACGGCGCGCTTACCAAATCACGGCCATATC 1510552 29 100.0 32 ............................. GGATGTGCTCGGAACTCCTGCGCAGCCCCCTC 1510491 29 100.0 32 ............................. ACGGCCATCCGGTACCGGTAGGTCGTGTCGCC 1510430 29 100.0 32 ............................. GGCCTGCCTGTAGCAGTGCTCAGCGCCTGATA 1510369 29 100.0 32 ............................. GCTTACGCGAAGGCCACCGAGAAGGCAGTGCG 1510308 29 100.0 32 ............................. TTGTCGTGTGCGTGTTGCCTTTGGAATCGGTC 1510247 29 100.0 32 ............................. GGTAGAATTGACTCCATACATATATACCTCCT 1510186 29 96.6 32 ............................T TGTTCGGCAACGGTGACGTTTCGCTGACATTC 1510125 29 100.0 32 ............................. CAATGACAACCTACACCAAGACAGACAATTAC 1510064 29 100.0 32 ............................. GGGGTGGTGTTAGGGAACGTCTGGAACATGCC 1510003 29 100.0 32 ............................. CGGTGGGGGAAGAAGAACATGCCGCCGTTCAC 1509942 29 100.0 32 ............................. GCTTAGGCGTGAAGGTGCAGGCTATCGGCTAT 1509881 29 100.0 32 ............................. TTCTTTTTCGTGACCACGTTCAAACGGTATCA 1509820 29 100.0 32 ............................. GGTTGGTGGCCGACGTGGCGGGCGAGATAGAC 1509759 29 100.0 32 ............................. TCGATCCACGATTGCTCGATATTCGAGTAAGT 1509698 29 100.0 32 ............................. GGTGACGTTAGGCCGGTGCTTCCGCGTCGACT 1509637 29 100.0 32 ............................. TTCTAGGCCATGAATCGGTTGAGACCACGGAG 1509576 29 100.0 32 ............................. TACCCACGAAAGCATGAGGGAAACCGGAAACC 1509515 29 100.0 32 ............................. GGTGACGTTAGGCCGGTGCTTCCGCGTCGACT 1509454 29 100.0 32 ............................. CGCATTGGCCTTACCGTGATGGCGCAGAACGA 1509393 29 100.0 32 ............................. GACATACAGAACACGTGGAACGCGTTCTATCA 1509332 29 100.0 32 ............................. GGGCTGCTGCTAGCACGAGGACACGCACCACT 1509271 29 100.0 32 ............................. GGTTGGAAGCTTTTGACGGGAAAGGAATTGGA 1509210 29 100.0 44 ............................. ATGATGATGGATTTGCATGGATACGCGCAGGCCGCGCCGCTCTA 1509137 29 100.0 32 ............................. GTGAGCTTCAATGTCTCCGCATCCGCCTGTTC 1509076 29 100.0 32 ............................. CCGCTCAGGCCGAGCTCGCGGGAGGTCAGGTC 1509015 29 100.0 32 ............................. AGGAACGAAGCGGAACTGCTCGACATGTCCGA 1508954 29 96.6 32 ............................T TGAGTCCATACATATATGTACCTCCTATCTCT 1508893 29 100.0 32 ............................. GGGTATGCAGTCACCCACATCACACTCCATAT 1508832 29 100.0 32 ............................. ACGCGCTGAAACACGGAAAAGCCCCTCCCCCC 1508771 29 100.0 32 ............................. TGTCCGTGTTCGGTGCGCGCGTTAATCAAATC 1508710 29 100.0 32 ............................. GAGAGCAAGACCTTCAACTCTAACGCGCCCCA 1508649 29 100.0 32 ............................. GAGCTTGGTAACGCTTGCTTCATCGATACTGG 1508588 29 100.0 32 ............................. TACACCGACGAACTCGGGGACAATCTTGCCGA 1508527 29 96.6 32 ............................T CCGCTTGGCCGACACAAGATCGCCGGCATCCA 1508466 29 96.6 33 ............................A CCACATGGGGGCGCTCATATCTCGACCGCGGAC 1508404 29 100.0 32 ............................. GGTTCCGGTCGTTCGACGGTTTCCTGCCGTTC 1508343 29 96.6 33 ............................A CAAGCTTACCCGCGAGAAATTCCCGGAATTGCG 1508281 29 100.0 32 ............................. CAATGGCCGTAACCTGATAACTAACCCCAAGC 1508220 29 100.0 32 ............................. ACGCCATGCTCTTTCAGGACGCGGAAACACTC 1508159 29 100.0 32 ............................. TTCCTGTAGCGCTTCTTGTCGAAGCTCATGTT 1508098 29 100.0 32 ............................. TTGCCGATATGCTCCAACGTACTCGCCATGTC 1508037 29 100.0 32 ............................. GATGCGCAATACATGCGTTGTTGTCGCAAGAT 1507976 29 100.0 32 ............................. CGGTAACGGTTTGCGTGACAACGTTGATGCTT 1507915 29 100.0 32 ............................. AATGCATTAACCCAAGCACAGACCAACGCAGC 1507854 29 100.0 32 ............................. GGAGAAGCCGCCGTGGGTGATCGAAACGGTCA 1507793 29 100.0 32 ............................. AAGGCACACGCTTCTGCGCCATCCACACACAC 1507732 29 100.0 32 ............................. GGCATATGGGGCGTATGGCGTACCCCTGCCAC 1507671 29 100.0 32 ............................. GGGACGCGCACCGTCATGCCGTCCTCCGTCTC 1507610 29 100.0 32 ............................. TGCGTGGTGCCATAAAGGGTGTCTCGCACCTG 1507549 29 100.0 32 ............................. GACGAAGCCGCGTGGCAAGCGAAACTATATAA 1507488 29 100.0 32 ............................. CGGCGGCGCGCTTACCAAATCACGGCCATATC 1507427 29 100.0 32 ............................. CGTTTGGTTAACTCCAATATTACCCGTTCGGC 1507366 29 100.0 32 ............................. ATCAACTACACCGGCCTTCCATGCGCCACGAC 1507305 29 100.0 32 ............................. CCGCGAAAGAGTCAACCAGCGTATCCAAACCC 1507244 29 100.0 32 ............................. TCACCAACGCCATCAACAATCTAAGCGCGGAC 1507183 29 100.0 32 ............................. CGATTATGCCACCAAGCAGTACGTCAACAGCA 1507122 29 100.0 32 ............................. GGGGTGGTATTAGGGAACGTCTGGAACATGCC 1507061 29 100.0 32 ............................. ACCAACCGTGATATCTACCGCGAACTCGCCGT 1507000 29 100.0 32 ............................. ACTATTAGGCAAATAGAGAGGATATGACCATA 1506939 29 100.0 32 ............................. AGCCCGGCATCAGGATGCACCGGCGCTTCGGC 1506878 29 100.0 32 ............................. GCGAACATCGATCGGGTCACGAAACTGCCGGA 1506817 29 100.0 32 ............................. GGGCATGAGTCCGGTCGGACTGGTCAAATCCC 1506756 29 100.0 32 ............................. TTGAGGGGCGACGCGTCATCGCCCGGTTCGAC 1506695 29 100.0 32 ............................. TCGCCGGTGAGGATGCGGCAGGTCCTCGGGTC 1506634 29 100.0 32 ............................. GGAAACGTGGGCGCTCACCGGCTCCATCAAGG 1506573 29 100.0 32 ............................. GGCGGCGGGGGAGGCTCGTCATCCGGCGGCAC 1506512 29 100.0 32 ............................. AGGTGAGACAAATACAAGCCATCTACCTCAGG 1506451 29 100.0 32 ............................. TCGGCCGCCGCGGCCCACGCCAGACACAAGCC 1506390 29 100.0 32 ............................. TCGCCGGCCGAACGGTATTGGCCACCGATGAC 1506329 29 100.0 32 ............................. GGCGGCGACGCGCGACCGCATGGCGACGGATG 1506268 29 100.0 32 ............................. GCGAACCCCATCGTCATCGTCATCACCGCGAT 1506207 29 100.0 32 ............................. TGTTCTGGGTTGGCGGCGATGCGGTCGGCCAT 1506146 29 96.6 32 ............................T ACGAACCCTCACACAACGTGAGGGTCACATTC 1506085 29 100.0 32 ............................. GCGATGGGCGCGATGACCACGCGCATGTCCAG 1506024 29 100.0 32 ............................. CCGTCAGCGAGGCTGGTGCTTCCGGCCATGCT 1505963 29 100.0 32 ............................. CCGGATACACGCAGAACAGCTTCAAATACCCG 1505902 29 100.0 32 ............................. ACGAAACACGCCGCGATGCCATTGGCGATATG 1505841 29 100.0 32 ............................. GTCAGGCCGTTGCCGCTCGTGAAGTCGGCCAT 1505780 29 100.0 32 ............................. TGCTTATGCGCGTGATCGCCGTGGAATCACCG 1505719 29 100.0 32 ............................. GTTACGGGATTGTCAACCCCGCTCCACATCAT 1505658 29 100.0 32 ............................. GGCCTCGTGCTGTTTTACCCCGACAAGCGGCA 1505597 29 100.0 32 ............................. TCGTCACGAAGGTAGGGGAAGTTGCGCATGGT 1505536 29 100.0 32 ............................. GTCGATTATGTGATCGATAAAGCAAACCAAAT 1505475 29 100.0 32 ............................. TGTGCCATCTGCATCTTGATCCCGCCGGTTCC 1505414 29 100.0 32 ............................. TTCGCCGGCATCGACACCGCCAACGTCGAAAA 1505353 29 100.0 32 ............................. TGCAAATCTGCCGGTTTCATGTCCAAGGGCAC 1505292 29 96.6 33 ............................A CTCTGTCCGGTGGTCAGGTAGTCGCCCGCGTCC 1505230 29 96.6 33 ............................T AGGGTACTGATCTTTACGGTTCATCTCGTAGAA 1505168 29 100.0 32 ............................. CGCAAGCACCCGCAGACCAAGCACTATCTACG 1505107 29 100.0 32 ............................. GATATTCAGAACACTTGGAACGCCTTCTACCA 1505046 29 100.0 32 ............................. AAACGGCGGGCGTCAACGTAATTAAGCAAATC 1504985 29 100.0 32 ............................. ACGCCTTGCGCAATGCGTAGGATTTATAATTC 1504924 29 100.0 32 ............................. CCCTACTTCGCCAAGTACAAGCTTGATATCGG 1504863 29 100.0 32 ............................. GTCTGAAACATGCCTGTGATATCCGCCGAATC 1504802 29 100.0 32 ............................. CGCGACCAAGGCCGGTGCCGCCAAGGCCAAGT 1504741 29 100.0 32 ............................. AACGCCTACGCTCAGGCGCAGGTGGGCACGCA 1504680 29 100.0 32 ............................. AACGCCTACGCTCAGGCGCAGGTGGGCACGCA 1504619 29 100.0 32 ............................. AGGCTAATGAGGAAAACATTGTGTATCTGCGG 1504558 29 100.0 32 ............................. GGGTCGTCGTAATGCGCCAGCACATCGGCAAG 1504497 29 100.0 32 ............................. AAGAAAAGCCTGAGCGCGGTGGACCTACTGCC 1504436 29 100.0 32 ............................. CTGCGACAAGATGACTCTTAGCAAAGGAGGAT 1504375 29 100.0 32 ............................. TGCTTCACCCTCTGCACACGTCTACCGTCCTT 1504314 29 100.0 32 ............................. CTGTTCAGGTCGAGGCGCCCGGACCAGCCGCT 1504253 29 100.0 32 ............................. TGGTCGGCGAGTTTTCCGGTTGCGGTGGTGGT 1504192 29 100.0 32 ............................. TGGGACGAAGCGCCCTCGATGCGGTATGCAAT 1504131 29 100.0 32 ............................. CATCATGGGCGATACGCACATCATCGCTGTCG 1504070 29 96.6 32 ............................T CGGCTGCGGCTTGGGCGGACCGGGCGGCATTT 1504009 29 100.0 32 ............................. AGCCGATACTTAGGAAACATGACAGATTATAG 1503948 29 100.0 32 ............................. TGGTACGACTGCCACACGTCCAATTGGATATT 1503887 29 96.6 34 ............................T GCAGCAGCACGTCGAAGATCTCCGGGTTCGCCTT 1503824 29 100.0 33 ............................. ACGTATGACAATTTTGCGTGTGCGTGCGGTTTG 1503762 29 100.0 32 ............................. CGTGTAAGCGCTATGGAAAAATCACTGGCGGC 1503701 29 100.0 32 ............................. AGAAGGATTGTCAGACACGATACCATTATTTC 1503640 29 100.0 32 ............................. TACCCCATGACCATCTGCTCGCTGGGCGTGAC 1503579 29 100.0 32 ............................. ATGGCGAAAGAGACGGTAATCTCACGCACCGG 1503518 29 100.0 32 ............................. ACCAGGAACCAAACAATGAATGACAGCACACT 1503457 29 100.0 32 ............................. CGGTCGTAGTGTGCCTGGGAACGATAATAGAG 1503396 29 100.0 32 ............................. CAGGGCAAGCTCACCATGACATCCACCGAACT 1503335 29 100.0 32 ............................. CATGTCCTCGACGGACTTCCTACGCCCGTCCG 1503274 29 100.0 32 ............................. GATGTGGAAGAACTTGGGGATGGCATCAGGGA 1503213 29 100.0 32 ............................. CGCCAGAAGGAGCCTGATGGGTTGCGCTGGTG 1503152 29 100.0 32 ............................. CGGATCGCCGCCTGTCTCAGTTCGGGCAGTTC 1503091 29 100.0 32 ............................. TCGACGACGAGAAGGCGCTCAAGACATACGCC 1503030 29 100.0 32 ............................. CGCATGCAGGCATGACCCGAGGCCGTCACGGA 1502969 29 100.0 32 ............................. GATTTCGGCTCGGGCTCGCCGCCTTCGCCGGA 1502908 29 100.0 32 ............................. TGCCAGCGTGCGGTTTTGGACGTGCCTTCCGT 1502847 29 100.0 32 ............................. CGTGCATCGAAGAGGCATGCGAGGGGCGGAGC 1502786 29 100.0 32 ............................. GACGGCCCGTGCGAAAGCCTCGAGGCGTTCTA 1502725 29 100.0 32 ............................. CTCATGGTCCGCCCGGTGTACGGGTCGTGGAA 1502664 29 100.0 33 ............................. GATGAACGAACCCACCGCACCAGACTGGAACCA 1502602 29 100.0 31 ............................. CGCTTCCGCCGGCCAGGGCCGGGTGCGCTTC 1502542 29 100.0 32 ............................. TACCTCCCAACGGGAATATGTCTCGTGTGTCC 1502481 29 100.0 32 ............................. GCGCTGCCGGTGGACAGGATCATCAAAAGAGC 1502420 29 100.0 32 ............................. GCCAAGCCGGGCGGCGGACTGCCAATCGATTG 1502359 29 100.0 32 ............................. CAGCAAGACACTACAAGAAAACCACCACAGAC 1502298 29 100.0 32 ............................. TTACCCAGACAGCGAATTCCATTAAATCTCAG 1502237 29 100.0 32 ............................. CAGCTGCAGAATATGGATGTCGGCACCTTCCA 1502176 29 100.0 32 ............................. AGTGGACAACAAACAAGGCTATATCAAGACAC 1502115 29 100.0 32 ............................. CTGCTCGTCAACAGCGACTTCAGCCAGGGCAC 1502054 29 100.0 32 ............................. GGTCGTGCAGTGGGCTGCCGACGCCTGGGCTT 1501993 29 100.0 32 ............................. CTGCTCGTCAACAGCGACTTCAGCCAGGGCAC 1501932 29 100.0 32 ............................. GGTCGTGCAGTGGGCTGCCGACGCCTGGGCTT 1501871 29 100.0 32 ............................. CTGCTCGTCAACAGCGACTTCAGCCAGGGCAC 1501810 29 100.0 32 ............................. GGTCGTGCAGTGGGCTGCCGACGCCTGGGCTT 1501749 29 100.0 32 ............................. AGGCCGAGAAGACCGACGACGATACCTTGCAG 1501688 29 100.0 32 ............................. TGCGCGACCTTCAAAACACCTTGCATGACCTC 1501627 29 100.0 32 ............................. GAGAGGAAGAGAATGGAGGGAAGAAGAATCAT 1501566 29 100.0 32 ............................. CAGCCTCGGCAAGGAATTCCAGACGCTGAAGA 1501505 29 100.0 32 ............................. TGGTGGGGAGCTCCAGGCAGATCATGTGGGCC 1501444 29 100.0 32 ............................. CCGGGTGGGTTATGCACAATGCTTGAAAAGGG 1501383 29 100.0 32 ............................. GGACGTGTTCGTGGCATCCACATCGACGGCCG 1501322 29 100.0 32 ............................. GTTTCGGTCGGAGCCGCGCCGTCGATAACAAG 1501261 28 96.6 32 ........-.................... ACCTACGGCGGCTACACCACCCTGAGCCGCCA 1501201 29 96.6 32 ............................T GTGGATGCGCCCGTGGCTGGCATGTTGGATTT 1501140 29 100.0 32 ............................. ACTGAGGGGCAAGTCATGTGTGAGAAGTGCCC 1501079 29 100.0 32 ............................. GCGCCCACGCACGTAGCACACAACACGCCAAA 1501018 29 100.0 32 ............................. CGTCATCCGCAGATCGACCAGGGCACCACCGG 1500957 29 100.0 32 ............................. GCGATGAAAGACGGCAAGAGGAACGAAGGCAA 1500896 29 100.0 32 ............................. GCGATGAAAGACGGCAAGAGGAACGAAGGCAA 1500835 29 100.0 32 ............................. TCGGCGACCTTCCAGGCAAAAGTGTTATCTGT 1500774 29 100.0 32 ............................. GGTGATGCACGACGAGATCATGGCCGCGCACA 1500713 29 100.0 32 ............................. AGCACCAAGAAACGGCTTAAGCCCCTCCAAGG 1500652 29 100.0 32 ............................. GGTGCGGTTGGACCCGTCCTGCGCCTGGTAGG 1500591 29 100.0 32 ............................. CATTCAATAGGCCGTTAAGAATCGCGCTACCT 1500530 29 100.0 32 ............................. CGTGAGGTGCACCGGCTTCGACGGTGCACAAC 1500469 29 100.0 32 ............................. GAGTTGTGCAATCTTCTGATTCCCCTCGTGTC 1500408 29 100.0 32 ............................. GCCAAGATTCAGGCTCAGCGTTTGGTCGAGAT 1500347 29 100.0 32 ............................. CCTCCAGGTAAACCCTCCATGTGAACCCTCCT 1500286 29 100.0 32 ............................. GCGTAGGCGGCCGTCTCGGCACTGAAGCATGT 1500225 29 100.0 32 ............................. CGCATCAGCCGCCAGCCGGCCGGACCCGTCTA 1500164 29 96.6 32 A............................ TCGGACGAGGCCGCGGCTGCCATCAAACGCAT 1500103 29 100.0 32 ............................. AACGGCGGCAACTGGTACCCCGTCGCCAACAG 1500042 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ============================================ ================== 176 29 99.7 32 GTGTTCCCCGCACACGCGGGGATGATCCC # Left flank : ATGTGGGTTTGTGGGATGAACGGGTAGGGGAGGTCTCTGCTGGAAAATCCTATGGTGACGATGAATGGGACGGCGGCGAATGGTAGTGATTGTGCTGACGGCATGCCCAATCGGTTTGCGAGGAGATCTTACCCGTTGGTTATTGGAGATATCACCAGGGGTGTTTGTGGGGCATGTCGATGCTCGAGTTCGGGAAAAGATATGGAAACGTATCGTTGAACTATCAAAAGATGGCCGTGCCATCATGGTCTATTCTGCGCGTAATGAGCAGCATTTGGCATTTAAGGTACATCGAGCGGACTGGAAGCCCACGGATTGCGACGGGCTGGAGTTGGTGAAACGACCTAAAGAAACGAAGGAAAAATCATTCGCGGGCACGCCTCGCCGAGGTTGGAGCAACGCCAGTAAATATCGGAAGGCAAAGAAATATTCAAAGTAAAACTGAATGAAAAATACTCACGTGATGAGAATGTGCCTTGATATTATGCTATTTTCTTAGT # Right flank : CTATGAGGATATCCGAATGCAGATGCTATGGGGTGTTCTCGTTGTCTATTTAGAAGTGCAACACCCTTGTTGGTCCTGTAATTCTAGCAGTTTGTCGGCGAACGCCTCGGCGGGCGTGCGGTAACCCAGCACGCGCATGGGCCGGTTGTCGGTTTCGTCGACCATCTCCCCGACATCCCCAGCCATATCCATCCGGATCCCGCTTCTTTTGGACGGATGCCGGCGGATCAAGCCGTTGCGGTTTTCGTTGCCTTCCCGCTGCCAGCTGGAGTACGGGTCGGCGAAATAGGCGTCCATGCCCAGCTCGTCGCGCAGGCGCGCGCCGGGCGAGCTCGGTGCCGTTGTCGTGTGTGACGCTGATTCTGGCGCCTTCGGGCATCCGGGGGAATATCGCCAGCTGCGCTCCGATGTTCTCCCCGGCGGTCTTGTCAGGGACGATCCGGGCCATGAGGAACCAGGTCTTCCGTTCAGCCTCGGTGTGCAGGTTGCATCCCACGCCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCACACGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //