Array 1 234724-234992 **** Predicted by CRISPRDetect 2.4 *** >NZ_SKBR01000004.1 Streptomyces sp. AJS327 4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 234724 29 100.0 32 ............................. GCGGCGCGTCCGGGGACCGCCCGCCACACCCC 234785 29 100.0 33 ............................. AGGTGCGTGCGGTGGGTGGAGACGGTGGCGGCG 234847 27 93.1 32 .............--.............. AGAACTGCTCCCCGCGCACACGCGGGGCTCCC 234906 29 89.7 29 ..............T...........T.A GCGTCGATGACTCGGAAGCGAGCGGCATC 234964 29 69.0 0 .A.C........T.T........C.AGGG | ========== ====== ====== ====== ============================= ================================= ================== 5 29 90.4 32 GTATTCCCCGCGCACGCGGGGGTGGCCCC # Left flank : CGCAGTCCGGGAACGTAACCGCCGCGCTCACGCGGCCGTTCGCGCCGCCCAGCGCGTAGCGACCTCCGGCACCACCCCGGAACAAGGAATCTCGCCACGCGCCGAGTCGAATGAGCGGGAGACCCCGGCGGTTCGTGCCGCGAAAAAGCGAGTCCACTCCCTCGAAGCTGAACTCGCACGACGTTTGGCTCTATCGCCGGAACAGCGCGTCGCGGAAGAAGCGGCACGACGGCACGACCGCTCGTCGCGCCCACCAGCGCGGCCTGCTGCCCGGAGCACCACTGGGTACGAGATCGGGACTCATCCACAGAATCCCGGAAGGGCTTCTTCGCCCACGATCTGATGAGAGACTGCACGCTGGCGCCGTCGTCAGCGTCCGGTGACTGCTCGGTCGTGGAGCCTCGTCCCAGACGGTGATGGGTTGAATGTGCGGGATGTCCGACTCCGGGAAAGTGGGTGAATCGCTGCCCATTCGCCGACGAACACCCAGGTCAAATACC # Right flank : GAGGGCTAGCTGGTTGTCGGCCGCGTCGCGCCGCTGTCCCGTGAGCAGTTCGTCTGTGAACGTGCTCTGGTGCGTGGTGGGGTCGCTGCCTCGTCCTGTCTCGCTCGGCGCGGTCGGCTCGATGGCGGTGTTGGGGCCGCGCGGGGCGGGATGGGGTGGGGGTGTCGCTGCCGGGGCCGTGTCCGATGACGCCGAACTCCGGGAGTGGAGGGCGCTGGATCGCGGTTCTCAGTGTGGGCCTGGCCGACCGGGGAGGTGCGGGGGCGCTCGCGTTGGGTGGGGTGAGGTTTGTGCTTGTCGCGATGGCGGGGTCGGTGTTGGGCGCGGTGAACGGGGTGCTCGTCGTTCGTGTCGGCTGTGTGGTCAGGTGCTGAGGGCTTCGGTGAGCTGGTCACGGGGACGACCGGTGAGGGCGTCGCGGAGTGTTTCGGCTCGGGTTCGTACCAGTCCGTTCTGGTAGCCCTTGGGGAGTTGGTGCCAGGTGGTGGTGGCCGTGTCGG # Questionable array : NO Score: 5.50 # Score Detail : 1:0, 2:3, 3:0, 4:0.52, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCGCGCACGCGGGGGTGGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 838277-838790 **** Predicted by CRISPRDetect 2.4 *** >NZ_SKBR01000001.1 Streptomyces sp. AJS327 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 838277 30 96.7 31 .............................T CCGCCGAGGTGATGGCGAACGGGCTGGAGAT 838338 30 90.0 30 .........................G..GC CTCATGGACCGTGCTGTTGCTGAAGTCCGA 838398 30 100.0 31 .............................. TGCGCTTGGTCGACCGGGGCCAGCTGGCACG 838459 30 96.7 28 .............................T TCCCGGCGCTGCACGGCACCACCACCGG 838517 30 100.0 31 .............................. CCGGACTGTTCGGCTCGTACTGCGCGGTCGC 838578 30 96.7 31 .............................T GCTCAGCGCGCGCTGCGGATGCCATGCTGCG 838639 30 100.0 31 .............................. TCCGGCGCCTGCCCGCCGACGACGCGTAGCC 838700 30 100.0 31 .............................. GGTCCCAGCCCCGCTCGATCAGCAGGACGTG 838761 30 90.0 0 A........................G...C | ========== ====== ====== ====== ============================== =============================== ================== 9 30 96.7 31 CTGCTCCCCGCCCACGCGGGGATGGACCCG # Left flank : CCGCCGAGACGATCCGCCTGCTCCTGGCCCGCGACATCACCCCGCCGGTCTACCTCTCCGCCAACATCCCCGCCGGCGACGAACACAACAAGGCGCTGGAGGCCCGCTACGCCGGCCGCATCAACCGAACCGCCTGACCCCTCACACCAGTTGGCCGCCGAGCCGCGCCAGGCAGCCCACGCGTCCCCACGCCCCGGCCCCCTCACCACCCGCCCCGCCGCCGTGCGCCTCTCGGCGGTGTGGCCGGGGCACACAGGAGAGACGCCCGGATGGCGTTCCCGTCCGCGCGGGACGGGCCAGTCCGGCCCGCGCGGCGGCGAAACCGCATACCCTGTGACCCGCCACCCGTCCCGTCACCGGGCGTTCACGCACGCTCTGTCGACTGGCGCGCGGACGGTGAACCATCGCGAACTACGAGGCGTATGTGCCATATGCCGGAATCCGCGAAACCGGCCTCCCGCATACCCCCACCCCGCTAAACCCGCAGGTCATTTCCCCCT # Right flank : CGACGTTGGCGGGAGACGGGTGGGCGGGGGTTGGGGTCAGTGGCCGGATCGGGGGGCGTCGGACTTGAGCGTCTTCATCGCGAAGCGTGACTGGAGTCTGGCCAGGCCGGGCAGGGCGAGGAGTTGCTGGGCCATGAAGTGCTCGTAGGTCTCCAGGTTCGCCACCGCGACGAGGGCGTGGTAGTCGGGGGCGCCGAACATGCGGCGGGCTTCGACGACTTCGTCGAAGTCGGTGAGCGCGGTTTCGAACCGTTCGACGGTCTCCCGGGTCTGGTCGGTGAGTTCGAAGTCGACCTGTACCTCGAAGCCGCGGTTGAGGGCTTTGGGGGCGATGCGCGCGTGGTAGCCGAGGATGACTCCCTCCTTCTCCAGACGCCGGACCCTGCGCAGGCAGGGGGAGGGGGTGAGACCGACGCGGTCCGCGAGTTCGGTGTTGGTCATGCGGCAGTCGCGGCGCAGGTGCTCGATTATTGCGTGATCGGTGCTGTCCACGCACGAAG # Questionable array : NO Score: 5.91 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.81, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCCCACGCGGGGATGGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCACGCGGGGATGGACCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-23.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1098261-1099881 **** Predicted by CRISPRDetect 2.4 *** >NZ_SKBR01000001.1 Streptomyces sp. AJS327 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1098261 30 96.7 31 .............................T TCCGCGAGGAGTACACCGGGTCGAGGATCTG 1098322 30 96.7 31 .............................C GGATCGGGGTGATCGCCACCGCGTCCCACCC 1098383 30 96.7 31 .............................A GCTCCACCGCAGTGTCCGGCAGGCTCGCGCC 1098444 30 100.0 31 .............................. GGACCGGCTTGTTCACAGATCCATCTCCATC 1098505 30 100.0 31 .............................. CGGCTCCACAGGCCGCATCGAGGCGCGCTAC 1098566 30 96.7 31 .............................C TCGCCGCATTGTCGGTCCTCCCCGTTCCCCT 1098627 30 100.0 31 .............................. GCGACTCCCGTGCGGCGCTGGGCCGCCTCGG 1098688 30 96.7 31 .............................T TCCCCGCGTGCGGGGAACGGGTGCGGCCGGA 1098749 30 100.0 31 .............................. GGACGCCGCTGACGCGTGACTTGTGGGACAT 1098810 30 93.3 31 ............................AC AACAAGCAACTGTGCGTACGCTGCCAGGGCG 1098871 30 96.7 38 .............................C TGTTCGGCGAGCGGGGCCGGCACCCGTACGCGGACCGG 1098939 30 96.7 31 ..........T................... TCACGTCGCGAGAACACCAGATCGCACTCCT 1099000 30 96.7 31 .............................C TCGCGGATTGCAGACTCACTTTGCGGACAAG 1099061 30 96.7 31 .............................T CGGTCACCTCGTCCGAGGTCAGCGGCCGGGC 1099122 30 100.0 31 .............................. GCTTCGCGCGGTGCCAGTGAGGCCATGCCGC 1099183 30 100.0 31 .............................. GCTTCGCGCGGTGCCAGTGAGGCCATGCCGC 1099244 30 96.7 31 .............................C ACCTGTGGACGGCGTTCGGGCCCACCAATGT 1099305 30 96.7 29 .............................T CCCTGCCGACCTGCGCTCAGCGAGCGAAT 1099364 30 100.0 31 .............................. CCGAAGAGGGGGTCGACTCCTCGCCCGAGAC 1099425 30 100.0 31 .............................. GGGCCTCGAACTCCTGAAGGCGCGAGGCCAG 1099486 30 100.0 31 .............................. ACCACCAGATCCGCCCCGCCGAGTTCGCGAC 1099547 30 100.0 31 .............................. CGGCAGCCAACGGCAGCACCGTGCACCGGTT 1099608 30 100.0 31 .............................. TCTTCCCGAGGCTCACCCGCTGGTGACCCTC 1099669 30 100.0 32 .............................. CGTCCGTTCGGAGTGATGGTCCGGCGGGGGCG 1099731 30 96.7 30 .............................C CCCTCCCCTGTGTCGAGGTGACGGTGTTGG 1099791 30 100.0 31 .............................. TCCCCGAAGCCCCGATGCGCCCCGACTTCGT 1099852 30 93.3 0 ........T....................T | ========== ====== ====== ====== ============================== ====================================== ================== 27 30 98.0 31 CTGCTCCCCGCGCACGCGGGGATGGACCCG # Left flank : GTGCTTGCGTGAGCCCAGTAGCAAGAGCGGGGCTGATCGATTCATGGTCGTCGTGTCGATGGCAAATGCTGACCTGGAGAATATTGATGGTGATCGAGCCCACGAGTACTTCGGGAAACTGTCCGAGGCGGTGATGGAAGAGGTGTCGAAAAAGATCAAGTGCCCGAAGCCTTGACTGGGCGAGAGGTCAAGCCGCCCCGTCCGCGAGGGTGTTGTTCCGGTTCGGCCCCACCGTGCTCAGTGCGGGCGGACGGTGCGTTCATTCCAACGTGCCCGTGGAGGCCGTGCCGACCATCAGGCTTCGAGGCCCATGCAGCCCGACCCCCGCCGTCCCGGCCGTCCAGGTGACCCCCGCGTCGGACCCGTTCCCCCCTCTGCTCGCTGCGCGGGGGCTGCCCGTCCGGCGCTGCCAGCTCTAGCCTGCTATAGGTGAAATGACCGAATTCCTGAAAGTGGCAATCCATCACCTCACGCGCCCATAAACTCCCAGCTCAGTTCCT # Right flank : TGTGATGGTGGGCAACTGCGCGGTATCGATGCGCGCATGGTCTGTCATGTGCCGGGCAATGGCTTTTCCAGCCTCGGGAGGCTTGCGGAGCCTGGTGGGGCGGCAGGTGCGGGTGTACACGGCTGTAGCGGAGCGTGATACTGGCGCACGCCCTGGAGGGCCGGTGGCTGCCGCGAGCGGAGCGACGCGCCCCGGCTGGCGCCGGTCAGGCGCCCCTGATCTATCTGGCACGGCCAACGATCCCCCGGAAGGATGAATGTGACGCACCGTCATCACAGCAGCTCACACCGATCGCCTCGACGACGTGGGCTGTACACGCTGAGTCTGGTCACGGCCGTGTCCTTGAGTGCGGCGGCGTGCCAGGGCTCCGGTTCGTCGTCCTCGGACGATAAACCCTCCTCCTCCCCCAGTCCGTCTTCGGCGTCGACCGCCGCCAGCTCGCCCGCGGCCAGTCCCTCTACGGGGGAGAAGGATCAGGTCAAGCAGAAGATCCTCAAGGC # Questionable array : NO Score: 5.89 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.73, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCACGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 1111293-1113155 **** Predicted by CRISPRDetect 2.4 *** >NZ_SKBR01000001.1 Streptomyces sp. AJS327 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 1111293 30 96.7 31 .....................G........ GGGACGGCGGGGCTCGGGCTGGTGGCGGCAC 1111354 30 96.7 31 .....................G........ ACACCGACACCCTCCCCAAGCACAACGTCGG 1111415 30 96.7 31 .....................G........ GCGTTCCTCCCTTGCTCCCAGGAGCGGACCG 1111476 30 96.7 31 .....................G........ ACGGCACCGACGTGCCCACCGGGCAGCTCCT 1111537 30 100.0 31 .............................. CGTCAGCCTGCTTGCGCAGCGAATCCGCCGC 1111598 30 100.0 31 .............................. TCACCGCTGAAATCGAGTGGGGCGGCAGCGT 1111659 30 96.7 31 .............................C TGAAGAGAGCGCTAGGTGTTTGAGAACTCAA 1111720 30 96.7 31 .............................C GGGACCGGCCCGACAACGGCGCCGCCATGGT 1111781 30 96.7 32 .............................T TGAAAGGGCTGGTGGAGGCGGCGCGCTGCGGG 1111843 30 96.7 31 .............................C ACGCCTGTGGATCGACCTCGTAGAGCGCGTC 1111904 30 96.7 31 .............................C ACGCCTGTGGATCGACCTCGTAGAGCGCGTC 1111965 30 100.0 31 .............................. CCATCACCATCCCCCGAAGCGAGGTCCGGTT 1112026 30 100.0 31 .............................. ACTGGCAGCTCAAGGGCATGGGCTACGGCCA 1112087 30 96.7 31 .............................T GGTGGGCGCGGCCTGTCCTTGCGGCGATCCC 1112148 30 100.0 31 .............................. ATCCCGGCTCCCCGCCGCCGTCGGCGGGCCG 1112209 30 96.7 31 .............................A TGCCCCTGACCCTCGTCACCATCGACGAGGT 1112270 30 100.0 31 .............................. CATCCAGGGCATCACCCAGCAGAGCGAGAGG 1112331 30 96.7 32 .............................C CCCCTCCCTTGCGTCGAGGTGGCGGCAGCGGC 1112393 30 96.7 31 .............................T TGCGGACCGCGAGGGCCGACAGCGCCTTGAT 1112454 30 100.0 31 .............................. CCGTGAAGCGCGCGATCCGTTGAAAGCGTCC 1112515 30 100.0 31 .............................. CGGCGCCCGCGCCAGCAGTTGGCAGAGCATG 1112576 30 100.0 31 .............................. GGATGCTGCCGCAGGTCGACTTCCCCGAGCT 1112637 30 96.7 31 .............................A CGGAGTCATCCGTGTTCGCGAGGGTGTTGGC 1112698 30 93.3 31 ...........A.................T CACCCGCTTCCTGGCTGGTGCCTTCTCCCAC 1112759 30 100.0 31 .............................. TCGCGATGCTCGCCTACCAGCGGAAGCACTG 1112820 30 96.7 31 ............................T. ACTCGGCCTGCGGCCGAAAGCCCACCTTCCA 1112881 30 96.7 31 .............................C AATATCCGCAACGCTCCTCCAACCAGTCATA 1112942 30 100.0 32 .............................. CGCGGTCCCGGAACCCGGGCGACCGCCACTGG 1113004 30 96.7 31 .............................C GTACCCCGAGAGATGGACCCCGCGAACAGTG 1113065 30 96.7 31 .............................T GATGAAGATCGGCAAGGGGCGGACCCAGCAC 1113126 30 93.3 0 ..........T..................T | ========== ====== ====== ====== ============================== ================================ ================== 31 30 97.7 31 CTGCTCCCCGCGCACGCGGGGATGGACCCG # Left flank : CCCCGCCGGGCTACGGGGATTCCTCACCCGCTGGCTGCTGGAGATCTCTCCCGGCGTCTTCCTCGGTTCACCCTCCACTCGGGTACGGCACGAACTCTGGGCGGAAGTACGGGAGTACACCGGCCAGGGTCGAGCCCTGCTCGCCTACCAGACCAACACCGAACAGGGCTACGCCTTCGAAACCCACGACCACTCCTGGAAACCCACCGACCACGACGGGCTCACACTCATCCACCGCCCCAACGCCACAGCATCGACGCAGAGTTCAGCGACCTCGCCGCGCTCCGGCTGGAGCAAGGCCGCCAAACGCCGCCGCTACGGCCGAAGATGACCACCCACTCCACGCCCACACTCCCATTCACGGTCCGGGGCCCCTCTGCGACCCCCACGACCCGGACGTCACACTGATGACCTCATTGCGAAGGATGTCAAAAATGATCGATTCCCCAAAAGTGGAACCCCAGCGCCCCACCACGTGACAAACCCCCAGCTCAACTCCA # Right flank : TTGCGTGCGGGGACCCCGATTCGGTGCTGACCTGCTCCCCGCGCGGGGGATGGTCTGCGCGGTGCCCTGTGGCGTTCTTGGGGGGCTGGTGGTCTGGTTGGTGGTGCTCTCTGTCCGCTCTTGTGTCGGATCGCTCGCTCAGGAGGAGAAAGTGGCTATGGGTATGCCGTCTCGCGGTGGTTGGCGTCGAAGCTCGTACTGCGACCGGCTCAACAACACCTGCCTGGAAGTCGCACGGGTCCATCGCGGGGTGGCCGTCGGGGACTCCAAAGACGTCGGTCGTCCTGAGGTGAGGGTTGGTCGGCTGGGCTGGACGCACTTCCTCGCCCACGTCACGGTCGAGGCGTAGTCGTCGGGACCCGGTGGTTCGTGTCCCGTGCGACGGGGCGGCTGCCTCGCCTCATGTCGCGAGGGTGTCCGTGTGGCGGCGTGATGGTGACCTGTTGTGCCGCTGGCCGGGCCGGTGGCGGTCGTGGTGGGCGTCACCGGCCCGGCTTCGG # Questionable array : NO Score: 5.64 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.49, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCACGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 2026220-2026370 **** Predicted by CRISPRDetect 2.4 *** >NZ_SKBR01000001.1 Streptomyces sp. AJS327 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2026220 29 100.0 32 ............................. GAGCACCAGGACCAGGACGACCGCGACCGGGA 2026281 29 100.0 32 ............................. CCGCTGCACCGCGTCCACTGGGAGGCCCCCAA 2026342 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ================================ ================== 3 29 98.9 32 GTACTCCCCGCGCACGCGGGGGTGGCCCC # Left flank : GTGCTTGGCCTGGAAAAAGACGGTCGGTGGCCTTAGTTGACGCACGTGATCGAGAACTGCGAGCCAGTCTGTCCTGTTGTGCCAGACAGAAGTCGTTCCGCGAAGCGAAGAGGTCACCGCCGAAGGGCGGGTTACGTATCGCGGTTCACCGGGGCCGACGTCCTCGAACCGCACTCGCCGACGCTCGGCTCTCTCGCCGGAACAGCGCGCCGCCGACGAAGCGGCACGACAACACGACCGCTCGTCGCGCCTACCAGCCTGGTCCGCTGCCCGGATCACCACCGAGTACGAGATCGGGACTATCCACAGAATCCCGGGAGGGGTTCTTCGCCAACAATCTGATGAGAGACTACACACCGGTGCCATCGCCATCGTTCGGCGTTTGCGCGGTCATGGAGCCATACCCCAAGACGGTGATGGGCTGAATGTGCGAGATGTCCGACTCTGGGAAAGTGGGTGAACCGCTACCCATCCGCCGACGAACACCCAGGTCAAATACC # Right flank : AGCTGGCGGCGGACTCGGACGTCGTGAGGGCGTACGAGCCCAGGATTCTGCCGGGCCTGCTCCAGACCGAGGAGTACATGCGGGTGATGTTCACCGCGCTCGAACGCCCGGAGAGAGTGGACCAGTTCGTCCAGATCCGCATGAAGCGCAAGGAACTGCTGGCGAACCCGCGCGACTTCATGCTGCGAACCATCATCGACACCCCCGCGCTGCACCGGATAGAGGGCGACCCCGAGCTGGTCCGGAACCAGCTCAACTACCTGCTCGAAGTGGGGATGCAGCCCAATGTGAGCATCCAGGTCATGCCACTGGACGCCTCGCTCTCGATGCTCCAGTACGGGCCTTTCAACATCATGGGCCTGCTCTCTTCCCGCCACGCCGTGCGCGACACCAAGGCTCGTGAGCGAGGTGACCTCGTCTTCGAAGCCGAGCAGTGGGCGGAGTTCGTCGACGGAGTCCGAGACGGCCTGATCTGATCACTGAGGACGAGACCGGGCTCC # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTACTCCCCGCGCACGCGGGGGTGGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //