Array 1 52258-51766 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_ATMK01000017.1 Prevotella intermedia ZT contig00017, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     52257	    36	 100.0	    29	....................................	ATTTTTAGAGCTACTTCCTCATCATAAGA 	
     52192	    36	 100.0	    29	....................................	ATCATCAAGATAACTACGAACTTCATCAT 	
     52127	    36	 100.0	    29	....................................	TTCGTTTTGAATCTTTTCGTCTTTATATA 	
     52062	    36	 100.0	    30	....................................	GGGAACATAAAACGGGTTGTCATATACAAC	
     51996	    36	 100.0	    29	....................................	TCTAACCAAATTTCACTATTCTCTTTGCC 	
     51931	    35	  97.2	    29	...............................-....	GATAATCGCTGTCGTTGTTTATCCAATAA 	
     51867	    36	 100.0	    30	....................................	ATTCTTTTTGTTTCATTTTGATAATGTTAA	
     51801	    36	  88.9	     0	.........A......C.........C.C.......	|                             	
==========	======	======	======	====================================	==============================	==================
         8	    36	  98.3	    29	GTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAAC	                              	       

# Left flank :   TTTGAGAATATTGAGCGTGCAAAGTACGAAGCCGTACTGAAGGCGCACCAAAGCATTTATAAATTGCTTAGGTTTATTACAGATACGGAAAACGACGACTGCATAATGGTGTGGGAGCAGCCTAAGGGCGGCGGAGAGAAAGTTTATTACTTCAGACAAGCCAATATACGTAAGTTTATAAAAGAGCTAACCGAAGAGATATACAACAAGGGCAATGGCATATTTCTATCAAAAAAGGTAATGCCACTGATATTCGAATATAGAAGTCTTGTCTATGGACTGTTGCTAACTGCGAAGGACAAGCCCGACGAAACGATAGAAATAAAGAATGAGAAGCTTGCAAAGAGAATGATAGAAATTCATCAGAGCCTCTCAATACAAATCAGAAAAGATATAAATTTAAAACAACGAGATTTACAATTCGATAGTTAGAATGCGTAAAATGGGTGGTGGAAAGAAAGGAACAAAACATATAAGAATCAGATAGTTAGGTTAGGTGC
# Right flank :  TTATTAACAAGCACGGGAATGGAATTGGGGGAAGTAAAAATGGAAGGGGGAACATACCTTTCTATGGGTGAAAAAAGGCGAGAAAGGTGTAAATATTTTTCACAAGTAAAACTGTTGCGTAACTATCTCGTTATCAGCGCATTGTAAAACCTATTGTTTTGCATTGCGAAAGCGTAGGTTTTACACGGTAAAAGCGGCTCTTTTGCGTTGCAAAAGAGCCGCTTTTGGAATGTAAAATCGAAATTATGGTTTTTCTATAGAATTATCTTTACAAAACAGGAGTGGTTTTACGTCGTGGAAAGTGTAGAGGTTGTGGCGTGGCTTCGGACGGCAGCATAATGGCGGCTTTGCCGATAGTGCGACATTGGCAAGGGTGGTTGGGGCTTCTGCATCGGCTCGATGCGGTGGCTCGTTCGGTTCTGTTGGTTTCGGTTGATGTGCAACGACGACAGGAAAGCCGCTGTACAGAGCAAGATAAGATGTTTTCTCGTATCGTTATC

# Questionable array : NO	 Score: 3.17
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-4.70,-7.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [5-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [58.3-63.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.78   Confidence: HIGH] 

# Array family : NA
//