Array 1 762-1861 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCFN01000039.1 Lactobacillus helveticus strain IMAU60210 Scaffold39, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 762 32 100.0 34 ................................ ATTTTTAAAGGTTTTACCATCAATGCACCATTTA 828 32 100.0 37 ................................ GCTAAATAATCAGGACGCTTTCTGCAATAATTTCTCC 897 32 100.0 35 ................................ TGGATATGGGTACCTTAAGGAAAATCAGACTAAGT 964 32 100.0 35 ................................ AACAACAACCTCGGTGACATAAACCCGTTGACCGT 1031 32 100.0 34 ................................ ATCATCCAAGTTGACTAAAGGGGTAATATCAGCA 1097 32 100.0 35 ................................ AAATTATTGGAGGTAAATAAAAATGAAACTCAGTA 1164 32 100.0 36 ................................ ACGATGTAAACAGTGGCGGTAATGAGGCTCAAGGGC 1232 32 100.0 34 ................................ TAATTGGGAAGTAGTGAACGGTATTGACCCTAGA 1298 32 100.0 34 ................................ TCTCACGCAATGTTAGCTACCAATCATTCTTGCA 1364 32 100.0 35 ................................ AAGCAGACAAGGCCGGAGCTGATGAATGCTGAAAA 1431 32 100.0 35 ................................ CCTACCGCTACCCACCCTGCCTTGTTAATTACTTA 1498 32 100.0 34 ................................ AAAGAGTAATCAACCTTTGTTCAGATATTGTGGG 1564 32 100.0 35 ................................ TAGTGAAGTAACTATTGCTCCAGGTGCCATTGTAA 1631 32 100.0 34 ................................ AACTAATTGACGATGGTGCTTTTGCGGCTGCATC 1697 32 100.0 34 ................................ TTCTACAGTTGCTTATTACAGTACATCATTAATT 1763 32 100.0 35 ................................ CTTTATTCCGTGGCAGCAAGCAGGCTCGATTGAAG 1830 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 17 32 100.0 35 GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Left flank : CGAATACCCACCGTTTATGTGGAAGTAGGTATGAAGTAGGTATGCAGCATGATGGTAGTAGTTAGTTACGATATTAATACGGAAAGTAAATCTGGTCAGCGAAGGTTACGTCATGTAGCCAAAATATGCTTAGATTATGGACAACGAGTTCAAAATTCCGTTTTTGAATGTAAAGTTAATTCGATGCAATTAGAGTTGATGAAAGAAAGACTACTAGACGAAATCGATGATAGCCAAGATAGTTTGTATTTTTTTAATTTAGGGAAGAATTATAAAAATAGAATTAAGTCATATGGAATTAAAGAGGTTATAAATTTAGAATCGCCTGTAATATTTTGATATCGGTGCGAACTGTATGTGAACATGCTTTTAGTGAAGATTCGCACCAATTTTAAACAGGTGAAAAGTGATCTTTTGATAAAAAATATATTTTTATCAGGGTAAGTTAATTTGAAGCCCAATATTTAGAAATGAATTGAAATCATGATCTAAATATTGCG # Right flank : TTTTAGGTCCATTGCGCTCTTGCCAGTGAAGTCGTGTCGCACTCCTTGTGATGCACTTGTGGGTGTATTAGTCGGCTTCTTCAACCCAGGCTTGAAGTACTAATTATTAAGAGGAGATTATTCAGATGACAATCGAAGAGATGCAAAAAGGCTATCAAAATGAAGTTGCTTATCAAAAACATATGCTTCGCAATCTAGGCTATTGATTCCAACTCTTTTTAACAGTTAGTGCGATTGGTTTGGTTTTAATTTACTATTTCCATCAATCAACTATGTGGCTCTTTATAATCGGAATTATTCTGATGGTCGCCGGTGTTTTAGGAATGTTTGCTTTTGGCTATGCTTCTTGGCGCGGACGGCAGAATGTCACTCTGGTAATCGAAGACTATGAGAAAAAGATTGCAGAAATTAAAAAGTTAGATCAAAATGCTTCCGGAACGGAAAAGATCCGTTTCAAATGATTCTTATATGAATAAAACAATTTCCCCTTCTCTAGAAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.50,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //