Array 1 762-1861 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_WCFN01000039.1 Lactobacillus helveticus strain IMAU60210 Scaffold39, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	================================	=====================================	==================
       762	    32	 100.0	    34	................................	ATTTTTAAAGGTTTTACCATCAATGCACCATTTA   	
       828	    32	 100.0	    37	................................	GCTAAATAATCAGGACGCTTTCTGCAATAATTTCTCC	
       897	    32	 100.0	    35	................................	TGGATATGGGTACCTTAAGGAAAATCAGACTAAGT  	
       964	    32	 100.0	    35	................................	AACAACAACCTCGGTGACATAAACCCGTTGACCGT  	
      1031	    32	 100.0	    34	................................	ATCATCCAAGTTGACTAAAGGGGTAATATCAGCA   	
      1097	    32	 100.0	    35	................................	AAATTATTGGAGGTAAATAAAAATGAAACTCAGTA  	
      1164	    32	 100.0	    36	................................	ACGATGTAAACAGTGGCGGTAATGAGGCTCAAGGGC 	
      1232	    32	 100.0	    34	................................	TAATTGGGAAGTAGTGAACGGTATTGACCCTAGA   	
      1298	    32	 100.0	    34	................................	TCTCACGCAATGTTAGCTACCAATCATTCTTGCA   	
      1364	    32	 100.0	    35	................................	AAGCAGACAAGGCCGGAGCTGATGAATGCTGAAAA  	
      1431	    32	 100.0	    35	................................	CCTACCGCTACCCACCCTGCCTTGTTAATTACTTA  	
      1498	    32	 100.0	    34	................................	AAAGAGTAATCAACCTTTGTTCAGATATTGTGGG   	
      1564	    32	 100.0	    35	................................	TAGTGAAGTAACTATTGCTCCAGGTGCCATTGTAA  	
      1631	    32	 100.0	    34	................................	AACTAATTGACGATGGTGCTTTTGCGGCTGCATC   	
      1697	    32	 100.0	    34	................................	TTCTACAGTTGCTTATTACAGTACATCATTAATT   	
      1763	    32	 100.0	    35	................................	CTTTATTCCGTGGCAGCAAGCAGGCTCGATTGAAG  	
      1830	    32	 100.0	     0	................................	|                                    	
==========	======	======	======	================================	=====================================	==================
        17	    32	 100.0	    35	GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	                                     	       

# Left flank :   CGAATACCCACCGTTTATGTGGAAGTAGGTATGAAGTAGGTATGCAGCATGATGGTAGTAGTTAGTTACGATATTAATACGGAAAGTAAATCTGGTCAGCGAAGGTTACGTCATGTAGCCAAAATATGCTTAGATTATGGACAACGAGTTCAAAATTCCGTTTTTGAATGTAAAGTTAATTCGATGCAATTAGAGTTGATGAAAGAAAGACTACTAGACGAAATCGATGATAGCCAAGATAGTTTGTATTTTTTTAATTTAGGGAAGAATTATAAAAATAGAATTAAGTCATATGGAATTAAAGAGGTTATAAATTTAGAATCGCCTGTAATATTTTGATATCGGTGCGAACTGTATGTGAACATGCTTTTAGTGAAGATTCGCACCAATTTTAAACAGGTGAAAAGTGATCTTTTGATAAAAAATATATTTTTATCAGGGTAAGTTAATTTGAAGCCCAATATTTAGAAATGAATTGAAATCATGATCTAAATATTGCG
# Right flank :  TTTTAGGTCCATTGCGCTCTTGCCAGTGAAGTCGTGTCGCACTCCTTGTGATGCACTTGTGGGTGTATTAGTCGGCTTCTTCAACCCAGGCTTGAAGTACTAATTATTAAGAGGAGATTATTCAGATGACAATCGAAGAGATGCAAAAAGGCTATCAAAATGAAGTTGCTTATCAAAAACATATGCTTCGCAATCTAGGCTATTGATTCCAACTCTTTTTAACAGTTAGTGCGATTGGTTTGGTTTTAATTTACTATTTCCATCAATCAACTATGTGGCTCTTTATAATCGGAATTATTCTGATGGTCGCCGGTGTTTTAGGAATGTTTGCTTTTGGCTATGCTTCTTGGCGCGGACGGCAGAATGTCACTCTGGTAATCGAAGACTATGAGAAAAAGATTGCAGAAATTAAAAAGTTAGATCAAAATGCTTCCGGAACGGAAAAGATCCGTTTCAAATGATTCTTATATGAATAAAACAATTTCCCCTTCTCTAGAAAT

# Questionable array : NO	 Score: 9.26
# 	Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     R [6,10] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-3.50,-2.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [73.3-48.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9.64,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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