Array 1 143788-144403 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP036259.1 Sporomusa termitida strain DSM 4440 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================================================================================================================================== ================== 143788 30 100.0 36 .............................. ATTAAACCAGCAGAAACGGTAATTACATTGTCACCC 143854 30 100.0 35 .............................. ATACGTATGCAACTCTAAAAATAGATCATCTGGAA 143919 30 100.0 38 .............................. TTATGGATTCCAACTATGCGCAACGAAGCGAATTAGGA 143987 30 100.0 37 .............................. CCGATATAGGGCATCCGCAGCAGCCTGTGCGCGTCAG 144054 30 100.0 37 .............................. CTGTAGTAAATCACTATGGTCTGCCATGTGTTTTACC 144121 30 100.0 35 .............................. GCAAACACGTCAGATATTTCATTTTGAGTGAGTCC 144186 30 86.7 158 ..C..............A....C......T TATCCGAATAATCTATTTTAACCCCTCTTTTCCATTTTAGCCTGATTATAAGACGTTATATTGCAGCTTTCCGGTGAAAAGGGGTAAAGCGAGGGATGAAGCATTGGCAGATGAGAAGGAAGAAACGAAAGAGCTGAGTGGAAGGGAAGTTTTTGAAA 144374 30 70.0 0 AAA....T.AG.A....C..........C. | ========== ====== ====== ====== ============================== ============================================================================================================================================================== ================== 8 30 94.6 54 GTTTTTAGGCTACCTATGAGGATTTGAAAC # Left flank : TCAGATACCCTTATGCAATCCCTGTTTTGCCAATGTCGAAACCAACAGGTTTCAGCTTAATCAACTCAGTCGACGATAACTCATTTGGAATATGGAGAGCCGTATGCGGTGAAAATCGTTTGTACGGTTCGGGAAGGGGCGGATTTCTAATCCGCCTATTTCATATAGCTTGTCTGCGGGAATTTGCAAGTACAGACCGGCTCGGCCGACCGGGGTTTTTCTGGGGGGCGAGGAAAGATGAGCCGTAAATATGCGAATAGTTCGGGAATTTTTATTTTTTTGCAGGATTTGCCAGAGTAAAGTCGAAAAAACCAAAAATAACCACAACGTTGATCTAAGCCCTGCCAGCCGGGAAGTTTGTCGTCGATCAGTAATAGCGTAAAAATGCCTGGAGAGCGACGACAAGATACTTAGCGGGAAATAAAGGTTTTGCGCCGCTAAGACCGCATATGGTTTTAAAGGCCTGATTATAAAAGGCCGATTCCAGGCGGTGAAGATGG # Right flank : CGGAAGATGGTGAATGAGCTGAAGCTGTCCTCGATACAAGGTGGTTTGACCGGCCATTGCCGGGAGGAAATGTGGCTTAAATTTTTCCGGGATATTATTCCGCAGAAGTTTTCTCTGTCCCAGGGGGTAATCATTATTGATTCCTATGGCAATGCATCGCGGGAAGTGGATATCGCCGTTTACGACGAACAGTATACGCCCTATGTGTTCCGGTATAACACGCTGAAGTTTATTCCAATTGAGGCGGTGGCGGTAGTCATTGAATGTAAGAGCGTTAAGCCGGGGAGTACACAGTTGACGAAGTGGGTGGAAAGAATTGACGCTTTACGGACATGCCAGGCAGGCATTGCCAGAATAGCGACCGGTTATGTTATGGGTTTGAACAATCGCATACAGACCGGGACCCGTCCAATCAAGATTTTAGCCTGTTTGCAGAAAGGTTACGGAACTAAAAAATTGCAGCAAGCTTTTGATTTTATTATTACCAGAAAAAAGGACGA # Questionable array : NO Score: 4.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.73, 5:0, 6:0.25, 7:-1.82, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAGGCTACCTATGAGGATTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.40,-1.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 153653-154075 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP036259.1 Sporomusa termitida strain DSM 4440 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 153653 30 100.0 37 .............................. GACTTACCCGGCTTATGAAGACACGATAACACAAGTC 153720 30 100.0 34 .............................. CTGCGTCACCCTCTTTTGCATCCGGCAGGGCCAG 153784 30 100.0 35 .............................. CCGGACTGCGTATAACGAACCTCAACATCTTTTCC 153849 30 100.0 37 .............................. CAAAAATGGTCAGAACCCTGCAACAGCCCAAAAGAGG 153916 30 100.0 35 .............................. TCAATTGTAACTGCAAGATGTTTAGCATCTTGAAT 153981 30 100.0 35 .............................. TGGACAAGTGGGACCGTGACGAAACCATAGACCGC 154046 29 80.0 0 ........A..-..........C...C.GG | G [154068] ========== ====== ====== ====== ============================== ===================================== ================== 7 30 97.1 36 GATTTTAGGCTACCTATAAGGAATTGAAAC # Left flank : TTGACACCTTTATTGCAGGCATGGGGGGCAGCAAATACTTTGATACCGTCCATTTCCGCCAATACCTGCAAAGTAAACTGGAACTGCCCGATGACAATGAACTGATCACCTGGGACCAACTGCCGACAAAAATAGCGGAAGAAAAATCCTCACAGGTTGGCTATCCGAAACATTGGCGTTTGCAGAGAATAGGGAAAAAGCATTAACTTAATTTACGGATTTGGATTGTACAGTAACTGGCAGGATGGGAAGAATGTATAATACTTACATATTTATGCAGGACCTGAGCTTATACAAGCCGAAAATAGTAAAAATGTGTTTTATGTACTCAGTGATTAGTTTTTTGCCTAGTTAAAAACTGTCGTCGATGTCCAGTAAGGTAAAAATACCCGGAGATCGACGACAGAATAATCTGCGTAAAGCAAGGCTTCTTTAGCAATGGTGTATTATGCATCTCTAAATCTGAATTTAAAAACGCTTATTTCATGCGGTAAAAATGG # Right flank : GCTACGTACCATAAACAAGAGAATTTCTCTTAAGGTGAAGTAGTAGCCTGTCTTTTCTATGCCTGCAGGGACCGGCACTTGATAACATAAAATGTCTTGACAAGTTTGACCAGAGCGAATAGAATAATAATCAGATTGACTGACTGGAAAACCAGAGGTGAGTAGCAGGGGGCTATTCGCCTTTTTTTGTTTCTATTATTAAATCTAATACATAGGGGGATATCATGAAAAAGTTACTTGCTCTATACCTGGTAATCATTGCGGCCCTATTCCTCGGCGGCTGCGGTTCGGCCGAAGCTCCCCAACAGGAGGCTAAGATTCTTAAGGTCGGCGTCACCTCCGGGCCCCATGCGGAAATCCTGGAACAGGTTAAAACTGTGGCAGAACGCGACGGGCTCAAGATTGAGATCGTGGAGTTCAACGACTATGTGCAGCCCAATACGTCCCTCGATCAGGGCGAAATTGACGCTAACGCCTTTCAGCACCAGCCTTTCCTGGAC # Questionable array : NO Score: 9.11 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTTTAGGCTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.40,-1.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 3 164060-164550 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP036259.1 Sporomusa termitida strain DSM 4440 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 164060 30 100.0 35 .............................. CAGAATAAAGCTATCGGTCAGGATGCACTGCTGGC 164125 30 100.0 35 .............................. CCGCTCATGAGAAAATGGCCAATGCCGCGGAGGCC 164190 30 100.0 36 .............................. GCTTCTGCTACTGCGACTGCCAGCATTTCAGCATTC 164256 30 100.0 36 .............................. GGATATCGCCTGTATCTGCTATAGCCAACGTCAGGA 164322 30 100.0 35 .............................. TAAATATGAATAATCGTAGACGCAATCTATATCGT 164387 30 100.0 36 .............................. CTGTAACTTGCGGACGTACTGTAAATTCCACCTTCT 164453 30 100.0 38 .............................. GCAGCCAGCTCGCGCATGAATTCCCGTTGAGTTCGACC 164521 30 90.0 0 ......................G.G...C. | ========== ====== ====== ====== ============================== ====================================== ================== 8 30 98.8 36 GTTTTTAGGCTACCTATAAGGATTTGAAAT # Left flank : TAATAGAAATGTCGTCGTGGACAGCTTGACTGTTACGTGTGTAGGTGCTGTATTCACCTTGCGCGGGCCTGGAAGTGTTGCCGCACTTTCAGGTCACGTCGACTTTTTAATTTCCACCTATTTCTAATTATAGCCTGTTTGCGGTAAATTGCAAGTGCGGATCGGCTGGCCGGCCGGGATTTTCTGGCGGGACGGGGCTGAAAGGCGCACTGTAAGCATGGGAGTATTTTGGTAAATTTGTATTTTGGGCAGGATTTGCAAGAGTAAAGTCGAAAAGACCAAAAATAACCAAATAACCACAAGATTGATCCACCCGTGAGATAAGCGGCGGCTATATGCCCTGCCTGCTGTGAAGTTTGTCGTCGATGGGTAATAGCGTAAAAACGCCTGGAGAGCGACGACAAAAAAATTAGCGAAAATAAAGGCTTTGGCGGCCGGTAAGACCGTGTATGGTTTCATAAGCTTGCTTATAAAAGGCTGATTCTAGGCGGTGAAGATGG # Right flank : TGTGTGGGCAATAGCCTTGCAGAATTAGCCGAAAGTAACCACAACTTATTAAGCAGCAAGTTGTGGTTACTTGCTGCTTAATAAGTTGTATTTCCGGCTCTGTTGACAGAGTTGATATCAAAGCAGAATTCTGTTCCGGCATTGGCGAAAAAGAAAAATGGATTCGCTTGATGAAGCGTTTAGCTTTTAGTTCGAATAATGAAATGTAGCGGGCAATCTTTGCCTGCTACATTTCATTTAGGGTGTTTCAAGCGCAACGGCCTGGCGGGCGCCGTTGCGCTTTAATCAGATTACTGTTGCGGGAAGGCCATAAACTCCTGGCGGATAGACTGTTGTCCCGTTTGTAGGCAATTGCCGGCGCCTGCCCGAATCTAGCGTCGTAAGCGCGTGAGCCATGGCCAGACCGAGCCATTATGAATGTAACAATGCAAGAATTTTTGTAAAAATTGTATTTTATTGCAGGATTTGAGAGCATGAAGTCGAAAAACCAAAAAATAATC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAGGCTACCTATAAGGATTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.40,-1.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 4 174338-174961 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP036259.1 Sporomusa termitida strain DSM 4440 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 174338 30 100.0 35 .............................. AACTAAATCCGGAGTATTGCGCTATGGCTGAACGA 174403 30 100.0 36 .............................. TCTGTGTACGGAAGAACAGAGCCTACTGGTCCTCTG 174469 30 100.0 35 .............................. CACATCCGGTAGGACGATGATAATTTTCCTGTTAC 174534 30 100.0 36 .............................. TAGAAATAAAGGAAAAGTGTAACACTTATCTGTTTT 174600 30 100.0 35 .............................. CACGCCTATGTACGTTTGGGCGTGATTTTATCTAA 174665 30 100.0 36 .............................. TCTATACCTGAAATTCCAAGCATTGAGGGGCTATGC 174731 30 100.0 37 .............................. TCATGCTCAGTAAAGGCGATGATTTAAGTATAGATGT 174798 30 100.0 38 .............................. TCAGTACAGAGGCGGCGGCCGTGCAGGTGGTGGTGAGG 174866 30 100.0 36 .............................. AAGTAATCTTTCTGGTTTTTCACCTGCTCCTGATCC 174932 30 86.7 0 ....T............A.A..A....... | ========== ====== ====== ====== ============================== ====================================== ================== 10 30 98.7 36 GATTCTAGGCTACCTATTAGGATTTGAAAC # Left flank : CAGACATGGGGGGCGGCAACTATTTTAACACCGTCCATTTCCGTCAATATCTGCAAAGTAAACTGGAACTGCAGGATGCCAGCGAGCTTATCACCTGGGATCAACTGCCGAAAAAAATAGCAGCAGAAACAAATTCCTCACAGGGTGGTTATCCAAAACATTGGCGCTTGAAGAGAACAGGGAAAAAAAGTTAACTTAATTTACGGATTTGGATTGCAGAGCAACTGGCAGGATTGGAAGACTGCATAATGTTTACGTATTCATGCAGGACCTGGGATTATACAAGCCGAAATATCAAGATGAAATGTATTTTATGATCAATATAGTAACCGATTAGTTTTTTTGCATAGTTAAAAATTGTCGTCGATGTCCAGTAATGTAAAAATACCCGGAGATCGACGACAAAAGAATCTGCGTAAAGCAAGGCTTCTTTAGAAATGGCGTACTATGCATTTCTAAATTCCCAATTTAGAAACACTTATTTCGTGCGGTAAAAATGG # Right flank : CTTAATATCAGAAAGACCAAGTATTGAGAGACTTATGCGTTTTTTAGGCTATTTATTAGTTTTGTCAATGCAAAAGTTGACCACCCTTGATTTGCTTTGCCGGGGGACAGTATTGGGAAGGTTATGGCCTTTTTACGATCTATTCCCGCGTGAGGCTTTAAGGCTATCAACAATGCCGCTTGGCTGCGTTTGGGAATAATATTGGGCCGGTCTAAGTAAATTCTTTAATGAAAAGAACAGCCAGAATTTATCAAGTGGATACAAGGAGCGGTATGCAATGCATTTGGATATTCATTTTAAACCTGCCGGCGGGAGGTTGGTTTTGCCTATTAGCTATAATTATCTTTTGCAGGGGGCTTTATATCATTCTCTCCATAAAGAACTGGCAGCCTTTTTGCATGAGAAAGGCTACACAGATGGGAAACGCAGTTTTAAACTGTTTAGCTTCTCTTTGCTGCAAGGAGTTTATCAACTGGACCGGGTTAAAAAAAACATTGCCT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTCTAGGCTACCTATTAGGATTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.40,-1.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 5 176140-176498 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP036259.1 Sporomusa termitida strain DSM 4440 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 176140 30 100.0 37 .............................. TGAGTAATTTCTTATGAGCGGCGCTGCCAACGAACTC 176207 30 100.0 35 .............................. CCCTTAGTCCGGGCCTGACAGTTATCACCGGTCCG 176272 30 100.0 35 .............................. CCGTCTGATTCTATAGCAAGAAACTGAACATCACC 176337 30 100.0 35 .............................. ATAGCGACCAGGGAAGCAACCAGCGCGTTCATGGC 176402 30 100.0 36 .............................. CGACATACCACAGTCTTCTCTCCTCGTCCATGCTAC 176468 30 93.3 0 ...........................GG. | A [176489] ========== ====== ====== ====== ============================== ===================================== ================== 6 30 98.9 36 GTTTTTAGGCTACCTATAAGGATTTGAAAC # Left flank : CCGGCTGTGCTTTACAGCACTTTGCTCAGGCCGGACGGCAGGAAATACACGGTATATTTTCAGCCGGGGGAAGCAGATTACGGGCGTTTGTTTAGTGAAAATCTACAAAAAAAATACCGGGCTTTTTGGGGCACCGATGCACCGGCAGGGAACGTGACGGCCAAAGCGCTGGGCTTGCCAAGGCTAAAGGTGGTTAATTATAAAGATATAATCATTAAAGGATACGCTGGCAAGCTGTTGGTAACCGGGCCGCAAGAACTGCTGCAATTAGCCGTGGATGGTGGCATCGGCAGCAAGAACAGTCAGGGATTTGGCTGTGTGGAGTTGCAGTAACCATCAGAATTAAGCTTGTAATTTTGTCGTCGATATCCAATAGCGCAAAAATCCCCGGAGACCGACGACAAACCCAATATAGACCTATCGCGGGTTTAAGGGAATGATGATAATTCGAGAGCTCAGCATGAGTGGGAAAAACCTCAACAATATCGCACTTTCAATGG # Right flank : CCGTGGGATTGGGAGCTTTAGGGCAATCAGAAAAAACGGATTTAAATAGGGTAACTTACATAGGTAATAATTACCCATGTTTATAAAACGTGGCTAATTTTACCAAAGGTGGTGGTCAGGGTCAAGTCGGCTGGGAGGACTGGGTTTTCTCAACTGGATGGCATTGAAATACTAGGTTGGGAGTTAAAATTGGCAAAAAATTCTTAATTTGTAAAATAATGAATATTCATGCAGGAAATGGATGAAATTTCCCGAAAAAAGACAAGGATAAAAAAACTAAAGTTTTGTCTTTTTTTAATTCATTATGTAAGTTCAGCGGTTACTCATTGCTAATTGAAATCAACAAGAAGGTGATACAATTGCTCGCTGAGTCAATCATCCGCATAGGCCGTCCCATAAAAGACGGGGGGATGCCCTGCCGGGAAAAAATCCGGCTTCTTACCGACGTGAGCAGTGAAAACTGCAAAAACTTTTTTCGCCATGTATTCTTAATTGAATTG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAGGCTACCTATAAGGATTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.40,-1.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 6 184982-185275 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP036259.1 Sporomusa termitida strain DSM 4440 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 184982 30 100.0 35 .............................. CGGTGTAAGGCTTACCACATATAGTACATAGGTCT 185047 30 100.0 36 .............................. CTTTCTGAACAGTGGATACCGCGAAAGCATTGGATT 185113 30 100.0 35 .............................. TTAGTAAGGAAAAGGCCGGGAAGATCAAAGCTCTG 185178 30 100.0 38 .............................. TTCTCCTATATGTGCTAAAGCTGGCCAGTAATAATTCC 185246 30 86.7 0 ................C.....T..A...A | ========== ====== ====== ====== ============================== ====================================== ================== 5 30 97.3 36 GTTTTTAGGCTACCTATGAGGAATTGAAAC # Left flank : GTTTATGAACCTTTTGTTACGCAATGGTAATGTCAAATAGAGTTGTAAATAGTTTAATGGACTTTGTAAAAGATTGATATGAGGTATAGCTATGTTTGTTATTGTGGTATATGATGTAGGTGAAAAGCGTGTGGTAAAGGCACTGAAGCGATGCCGTAAATATCTGAACTGGGTACAAAATTCGGTTTTTGAAGGGGAGATATCGGAGGCGAATTTGACTAAGCTTAAAATGGAACTAGACAAGATTATTGTGCCTGACGAAGATTCGGTTATTTTTTATACTTTAAGAAGCACCCGTTATTCCGACCGTCAAATTATGGGGTTGCGTAAAGGCGGGCAGGATTTGATTATCTAAAACTTGTCGTCGATCGGTAATAGCGTAAAAATGCCTGGAGATCGACGACAGCAGATTTGGCCTAAACAGCAGGTTTGCGGCTAGAAAGTGTTGTATGTTTTTCAATGGGACTATTAAAAAGTCTTATTTTATGCGGTAGAAATGG # Right flank : ACCCGTATTGCTTAAAGGATAGCTTATCGGCGCGATTTTGTTGCAGCAAAAGCAATTGCCGCCGATTAGGCGGCTAAAGCGGCTTTCCTGGCTTCCACTGTTTTGCAGCCTGTCCTCTGGATGGGGCGCTGTTTATTTAGTCTTTCATTTTTCTTAGCTTTAACGCAGCCAGCGGCTGCAGTCTGTCCAAATGGCAGTGCCAATAAAGCCGCCGATAAAGAGTCGCTCCCAGTTGAGGCCGCTATAGCACTGGTCAATAAGTATAAATACTACGATGATAATACAGACAGAGCTGCAGGCGCGCATTGGTTTTCCTTCCAATGAAGCAGTGTGGGGCCGTTGGTTCTTCGCTGAAACATGAGAGCAAGAAGAGGCCGGCGAACTTGTTATTCCAGTTTCCCAATCACATATTCATAGCCGAAACGTCGGTAATCCTCCCAAAACAGGCTGCGGTTTTCAGGCAAGGGGGCGGGTTCACGCAGACGTTTTTGTCGTTCAGT # Questionable array : NO Score: 8.92 # Score Detail : 1:0, 2:3, 3:3, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAGGCTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.40,-1.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : NA // Array 7 3888587-3887444 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP036259.1 Sporomusa termitida strain DSM 4440 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 3888586 32 100.0 33 ................................ GCTAAAAACAGAATTACAGTGCCTTAAACTAGA 3888521 32 100.0 33 ................................ TTGCCAAGGCAACTGCCGGCATGGCGGGTATCT 3888456 32 100.0 33 ................................ CTATAGCACAATTAGCTGATGCTATTGGGTTAA 3888391 32 100.0 34 ................................ AAATCCGCCTGTAACATAGTTCATTTTTTTAAAG 3888325 32 100.0 34 ................................ CAACGTGGCGCTGATCTATAAGGGTACGACATGG 3888259 32 100.0 33 ................................ ATGCCCGGATTGGGAAGATCCGCTGCGTGGACG 3888194 32 100.0 34 ................................ AAGCTAGATGGCGATATACCGGAGTAACAAGGGC 3888128 32 100.0 34 ................................ CATAGGGTTCTTGGGCGCTTCCTTTCGGGCTTTC 3888062 32 100.0 32 ................................ ATTTCAGTAACGGAGCCGCAATGAAATATTTT 3887998 32 100.0 33 ................................ CTTTTTGCGGGTTTTTGGGGCAATAGTTCTTTT 3887933 32 100.0 33 ................................ TTTGGTAACCTCATCTTCTTTTGCTCCGACCAT 3887868 32 100.0 34 ................................ GTTTGCATCCCGAGATAAGATGGCCCTGGAATCT 3887802 32 100.0 34 ................................ CCTGCTTATCGTGATGATATTAAATTGTATACGC 3887736 32 100.0 33 ................................ TTCTAGTTGTTGCAATTGCTCCATTGTTATTAG 3887671 32 100.0 34 ................................ CGATGACTTTACCTGTGGTTAAATTAGTGCTATA 3887605 32 100.0 33 ................................ CTGTCTTACGGCCTCTACACTCACCTTTAGACC 3887540 32 100.0 33 ................................ ATAGGTTATGGACACAGTTTTCCGGGTAATTTT 3887475 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ================================== ================== 18 32 100.0 33 GTCGCGCTCCTTGCGGGCGCGTGGATTGAAAC # Left flank : TATAGAAGATTATCCGCCATTTTTCTGGAAGTGAGGAGAAACAATGCTGGTTTTGATTACCTATGATGTAAGTGTCACTACTGATGCCGGTAAGAGGCGGCTTCGCCGGGTGGCAAAACAATGTGTGAATTATGGGCAACGGGTGCAAAACTCGGTTTTTGAATGTCTCGTTGATCCAACACAATTTGCTGAACTTAAGCATCGTTTAGAAGCGATCATTGACGTTGAGACCGACAGTTTGCGTTATTATTTCCTTGGAAACAACTGGAAGAATCGTATTGAGCATATCGGTGCTAAGACGGCTTATGATCCAGAAGGTGTTTTAATGATCTGATGCGAATCCCAAGTGAACATTATTTCCCCGGGATATTCGCAGTATTGATGTTACAAGGATTCGAGCAACTTAGGCTATAGAATTTTTAATTTTTAAGTTCGATTTTACTCGGTTCGCAAAAATAGCGATTTCAGAGCTTGATTTATATGAGTTTGTGGGATCGGGG # Right flank : ATCGGATAAAGTGACTACCATGAGCGGATCATTAGCTTATCTATGTAGATATTGTTTACTTTGCGTAAATAATTGTATTTACTAAAATGATTGTACCGATACAATTTTATTGGGCCGGTACTGAATTTTTTTAATTATAACAAGTGGCGAAGGAGAACTCAATATGAGTCTGGATTTTTCCAATTTTGTATCGATACAATTAAGTAAAGAAGATAAGCGGCCTCTGTATGTGCAATTATATGAGTATTTGCTGGAGCTCATTGTGAGCGGGCGGTTAAGTTATGGGTATTTACTGCCGCCTGTGCGCAAGCTAGCCTCCTTGCTGGGGTTAATCCCGGTGCTGTGGTGGGGGCCTACAAACTGCTGGAACAAAACGGCTATGTCTTTTCCCGGGCCGGCAGCGGCAGCTATGTAGCGGAGAGCACGGGCCGGCCGGATGATGAAAGCCCGGCCGGAACTGCTGCCGATACGGTTGAGGTTATGCCTAACAGACCGGTGCC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCTCCTTGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCTCGCGGGCGCGTGGATCGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.00,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 8 3965090-3964545 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP036259.1 Sporomusa termitida strain DSM 4440 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 3965089 29 100.0 36 ............................. AATAACATTTGATTCTTGCAGTACAAATCGAGCCTG 3965024 29 100.0 34 ............................. AAGTGTATCTGGAGATTCTGAAGTAATTGAATAC 3964961 29 100.0 35 ............................. TTGATGCGGTCGGAGAAGGCACAAAAAGCGCCGCC 3964897 29 100.0 36 ............................. TCAACCAGCAGCGCCGCCACTGGAACCTTACGGTAT 3964832 29 100.0 36 ............................. AAGCAATCTACCTGACCACTGAGTATATTAATCTTG 3964767 29 100.0 36 ............................. AGGACCACCGACATTACCCTATGGTATTGTTAGCCA 3964702 29 100.0 35 ............................. AAATAATCTGCGGAGCAAGTTTTAAGTTTTTCCAT 3964638 29 100.0 36 ............................. CCCACGGCCAGGCGGGTGAAGGTCTTGTCCTCATCC 3964573 29 89.7 0 ......................GA....G | ========== ====== ====== ====== ============================= ==================================== ================== 9 29 98.9 36 CTTTGACCGTAACATGGATGTATTGAAAC # Left flank : TACCCCTTTTTTGGAAAAAGACCGGAGGTAAACAATATTATGGAAAAAAATTATAATTATGTTATTCTTGTCTATGATATTGGTGAGAAGCGGGTAGGAAAAGTGTTCAAGATATGTAAAAAGTATTTAGTTCCTTTCCAAAAATCGGTTTTTCGCGGCGAAATTACTCCTGCAAACTTAATTAAACTTCGCAGTGAACTTCAAAAAGTCATTGATAAAAAAGTAGATTTTGTAGCTCTTTTTAAAATGACCGGCGATTACGTATTTGATGAAGAAGTTATTGGCGTTCGGCTCCATAATCAAGAAGCAATGCTACTGTAATAATTTTCCCAACCGGCCTAATCTCTAGGCAAGGCTTGCGTCCAAGAGCTATAAGGGATGAAGCGCAATTTGAGGCAATTGATTAAATGTTGCTCTCCGGTTGGGAAAATATTGCTAAGCCCTTGTAAACATTGTATTGTATAGCTATAGGTGTTTTGGCAAAGCTTGATTTTACTAGC # Right flank : CAAGGACGACGTTCTTTTTGATTCGCTAGTATTCAGGTATATCTGCCATTGTTTTGGCGTAAGTCTATATAGAGGTTGAAGTATTATCTGCAGCAGATAACCGGGCTAACCTGGATAATGGGGGGAGGCTGCATGGCATTACTATTTCAACTTGGACCTAATCAGCTTGGTGCGCTTACCGCAATTCTGGCAATCCTGTGGGCCGAGGACCTTGATCTGGATGAACTCAATTCCCTGGGAAACTTTTTTGAGGCCCTGGGCAGTGTCATGCTTGCTATCGCCGCCCAGAAGCAGCTATTGCAGCAGCACCAGGCGGAAAAGCAAACGCCACCTGAGAGTGAACAGATACAGGAGTTAATCAGGCGAATTCAAAAATTGGAGTCTTAAGTTGTCGTTGTTCTGTGCCCTACAGCCGGCGCAGTTCTTTTTGTATCAGGCCGCATAATAAGCCGAAGGCGGCTTGATGGGGCTTGGCAATGAATAGATGCGTAACTAAATCG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTGACCGTAACATGGATGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 9 3977484-3976287 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP036259.1 Sporomusa termitida strain DSM 4440 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 3977483 29 100.0 36 ............................. TCTCTATTTGGATCAGCGCCAATATGTCAGGGCCAA 3977418 29 100.0 36 ............................. GAGCGATTTGGCGGTTGTCCGGGAATGGGTGGTATG 3977353 29 100.0 38 ............................. TAGCAGCCTCAACCACAATGGATATAACCATCGTTCGA 3977286 29 100.0 36 ............................. AATCAATATTTCTACTGAGGGGATACTGATTAATGG 3977221 29 100.0 35 ............................. GGCTGAATTGGGATAGAGAGCCGTTTGTCATCCTT 3977157 29 100.0 36 ............................. CTCCGCACGCAAGCCTATCCGGAATGGGAAATAGAG 3977092 29 100.0 36 ............................. AGGAAGTTGCCAGAACATTCGGCATCGGCGAACAAA 3977027 29 100.0 36 ............................. TATGGCGACTTCGGCAGTGGTCTACATGAAAAACAT 3976962 29 100.0 37 ............................. AACATTAAAATATCCATTAAAAATGGCGTGTTAACTT 3976896 29 100.0 37 ............................. AAGGCATGGGAGTGATTATATGTTAATCGAAGTAGGC 3976830 29 100.0 35 ............................. TGTTTAAACTCCGGTCAATGGATGGGTTAAAATTC 3976766 29 100.0 36 ............................. CAGTGTTCGCCGTACATTTTCATCACCTGCCGATAT 3976701 29 100.0 36 ............................. GCAATAAAATCATCTCTCAAGGGGCAGCCGACTGTT 3976636 29 100.0 36 ............................. TGCGGAAAGGAGTGAATGAATTACGGGATACCACGT 3976571 29 100.0 35 ............................. TTAAAAATGGCAAAAGTATAGGGCCACTCAGTTGT 3976507 29 100.0 36 ............................. CGGAGATATCGATATATAACCTAACGGCAGAAACAG 3976442 29 100.0 35 ............................. ATTGTTGATCCGTGGGGCAATGCTTATGTTTATAA 3976378 29 100.0 36 ............................. TAGATATCTCCCGGATTATGTACTTCCAAATGGCCT 3976313 27 93.1 0 ............--............... | ========== ====== ====== ====== ============================= ====================================== ================== 19 29 99.6 36 CTTTGACCGTAACATGGATGTATTGAAAC # Left flank : GGATTGCTTTATGGAGGTAAGCTAGCTGGCTATTTAACAGACGGTACATTGTGCCTAAATGAATGGTATATAACCAAGCGGCGGTTTGCCAACAATTTATTAAAATATGATTGACAGTCAGTAAATTAAATAAAATAAGTCAATTATATGAAATAAGTTAAGCCTGACCCCAATGCACCCATAATTAAACTTGAAGTGAACTTCAAAAAGTCATTGATAAAAAAGTAGATTTTGTAGCTCTTTTAAAATGACCGTCGATTTGTATTTGATGAAGAAGTTATTGGCGTTCGTCTCCATAATCAAGAAGCAATGCTACTGTAATAATTTTCCCAACCGGCCTAATCTCTAGGCAAGGCTTGCGTCCAAGAGCTATAAGGGATGAAGCGCAATTTGAAGCAATTGATTAAATGTTGCTCTCCGGTTGGGAAAATATTGCTAAACCCTTGTAAACATTGTATTGTATAGCTATAGGTGTTTTGACAAAGCTTGATTTTACTAGT # Right flank : TGCTTTACAGAAGGTACAGTTTGCAAATCTTCGAACAAAACCGGCAAATGAGAAGCCGGTTTTATTTTTTTGTCTAGCCACTTTCTTGTTATGCGCTTACCAATAGCCGAAAATTCATTGACCACGAGACGTGTTTCGGCTATAATGTAATAAACTTTATTTTTAGACGATGAGGTGATTTCATGAATTATATACATAGAGCAATGGAGGATACGTTTCTCCACCTTAGTAAGGAGTTTCCCGCACTGCTACTTACCGGTCCAAGGCAGGTTGGCAAGACAACCATGCTGCAAAAACTAGCTGCGGAGGAAAACATAGGACGGGAGTATGTGACACTGGATGATTTGACGGAGCGCCAAATGGCGAAGAATGACCCGAAGATGTTCCTGCAAATCCACAAGCCGCCGGTGTATATCGATGAGGTACAGTATGCACCGGAGCTGTTTACCTATATCAAAATACACGTTGACCAGAACCGACGGGCCGGTGACTTTTGGTTG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:0, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTGACCGTAACATGGATGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA //