Array 1 188-26 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCMW010000031.1 Coprococcus comes strain DFI.3.84 MCJEMOBB_31, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 187 30 100.0 37 .............................. CGTAGTTGACGGCATCGGTCTTTTCGGTTTTAAGAAG 120 30 100.0 35 .............................. TGGGAGGGAACAGGCAACCCGGCGTTCGGTAGCTC 55 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 3 30 100.0 36 ATTTCAAAACATCTCATGTTATTGTTTATC # Left flank : CGTACCTTCTTCACCATAGCCACGATATCCGATCCGCAAAATTGCGAACTCATAGCCTGCTGCTTTCACCTGCTCCCAGTCAATATCTCCCTGAAAAACAGATACATCTACGCCCAGCCTTGAAGTATATTTCTTATCCTCATAGCTGATCTTATTTTCATTTTTTACAAAAAGTGCTTTATCATACGGATTCTTCGCAACTGCTTCATTGATTTCCACCGTATAACACTCTCCGTGTGCATCTACAAAATCAAGCGTATTTTTCTCATCTGTACTTTCCGCATTTTTTGCATCCGCAGAAGTTTCTGCTGTTTTCTTTCCAGAACATCCTGCAAGCAAAGCTACTAACATTCCGAAAATAATCCATCTTACTTTTTTCATCTATTCTCCATTTTTCTTCGTTATATTTTCCACAGATTCTAAAATGTAAACTGTGTATTGCTCCACAAAAGGTTATTATTTATCTCTTTTCTCTTCAAACCTGCAAGTGCAATTTTTTT # Right flank : CTCCTGTGGAAGACTTTCTGGTTATG # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTCAAAACATCTCATGTTATTGTTTATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [23.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 165451-164183 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCMW010000006.1 Coprococcus comes strain DFI.3.84 MCJEMOBB_6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 165450 30 100.0 36 .............................. AGCGCCATTGATTATAGTATCTCCTGGAACTACAAA 165384 30 100.0 36 .............................. CCAACGTTCTGATCCTCGTCTGCTGGTTCAACTATT 165318 30 100.0 34 .............................. AGTATTCGTATATTTGGTCTGCTGATGGAATGAT 165254 30 100.0 35 .............................. TCCTGTGGAAGACTTTCTGGTTATGACGGTAATCT 165189 30 100.0 35 .............................. TACAGAGAATTCGTACTCGCCATTCGTATCCACTG 165124 30 100.0 35 .............................. GGAAATATCCCGTCTTATGCATACCAGAATTTCTG 165059 30 100.0 36 .............................. TGGTAAATGTGGACGTTACGGAAGTCCTTATTATGT 164993 30 100.0 34 .............................. TTGAAAGACGAGCGTGATGAACTGAAATATATGC 164929 30 100.0 35 .............................. ATAATTAAATTAAGTTAAGATATAGAAAAGCAAAA 164864 30 100.0 34 .............................. ATCTTTCAATTCTCCTTTTCCAAGACAAATCAAA 164800 30 100.0 35 .............................. ATTAACTTTCCGCTTGCCTTATATCCTCATTGTAT 164735 30 96.7 35 ..............T............... AAAGACTACAGCATTATGGTACATCACCAATATGA 164670 30 96.7 36 ..............T............... AGCAAAGGTTCTTGGGTGTTCAAAAACTCATTTTGG 164604 30 96.7 36 ..............T............... GCCTCTGCAAATGCATGGGTGTTACCAAACAAAACA 164538 30 96.7 34 ..............T............... TAAATTCCGCAAATCACGATTCCAATAATACCGA 164474 30 96.7 36 ..............T............... AATCACAGCTCTGATCGATGAACCGATCGGACTGAT 164408 30 96.7 34 ..............T............... TATATCAGCGGTACAGATAGTGCCTCATTCGTAA 164344 30 96.7 36 ..............T............... CTCTGCTGTTTCTGTGCTCGTATTTTCGTACACTGC 164278 30 96.7 36 ..............T............... ATTCTCGACAGTTGGGCAAGGTCTTTTAGATTTAGC 164212 30 96.7 0 ..............T............... | ========== ====== ====== ====== ============================== ==================================== ================== 20 30 98.5 35 ATTTCAAAACATCTCATGTTATTGTTTATC # Left flank : GACTTTCTGGTTATGACGGTAATC # Right flank : CCTCGCATTTCCGCGTTTTTTAGTTTCTCCCCTCCCCTTTTTCCCCTTATATTTTCTATATTTCTCCATTTTTTACCAGCCAACACCCTTATCCTGGACCGCCCTACTTATCATCCCATAAATCTCTTAATTTTTCAAGCTTTCCTGGATTTTTCATTCTTTTTCCGCCTGGTAAAAATCCTATAATTATATCATTAAACTTTCTCCTGTTACCTCCCCTCCATTTCCCAAAACTTCTTCTCCAAACACATTGTCATTCATCAACTTGATAATGCAAATAAAATCTTCATCCTTGTCTATTACCTGGTTCAAATCCTTCCGCAATTGTATAAACTTTGATGGCGTCATCTCTCCTCTAAATACAGACTTTTGAAAATGTGAAAGATACTTTTTACAGATCTTAAACACTTTCTGAACTCGTTTTTCATTCACATCATAAAACAAAAATGCATAATTATAATTTAATTCTTTCTTCTTTTTCATTACATCCCTTCTTTCAA # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTCAAAACATCTCATGTTATTGTTTATC # Alternate repeat : ATTTCAAAACATCTTATGTTATTGTTTATC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [0-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //