Array 1 25137-17365 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADRFW010000023.1 Porphyromonas levii strain DD44 JD59_22, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 25136 30 100.0 34 .............................. TTCGGATGCGAGAGAGCTCCGCTTGCTCTTCCGT 25072 30 100.0 34 .............................. TCGTGAGGCTTGGTCGTAAGAGTTGTACTTCCCG 25008 30 100.0 35 .............................. TTTCCACTTGGTCTTGATACGGTCAGGGTTGCGGC 24943 30 100.0 36 .............................. ATAGCTTGGCTGGCAGGTCGCAGGAAAGCTAATAAT 24877 30 100.0 35 .............................. TAAGCGACCAAGCCCCTGCGGCAGCCGAGGCTGCT 24812 30 100.0 35 .............................. AATGGAGCCGTCTACAGCTGTTACAGCCGTCCTCA 24747 30 100.0 37 .............................. ATCTAACGAGATAGGGGAAATCGTACGAAATTATATC 24680 30 100.0 34 .............................. ATAACCTCGTGGATTTTAACCACGACCACCCCCA 24616 30 100.0 35 .............................. TTTTGATTATCTCTCTTCCTTATTATTCTATCATC 24551 30 100.0 36 .............................. AACAAAGAGATACTAGAACAGAACTTCAACAAGCTC 24485 30 100.0 36 .............................. ACAATAGATGTCATAAGAGAGGTTAAGAGCGAGCTC 24419 30 100.0 36 .............................. GAGTATTATGCTGTAAAAGTGACCGGTGGCAAACGA 24353 30 100.0 36 .............................. TTTTTGTAATCGTATTCAAATAGAAGTCGCTCTACT 24287 30 100.0 35 .............................. GAAAAATTGAGGTACATCTTCGTCTGAGCGACCTT 24222 30 100.0 36 .............................. TAGAGTTAATATCTACGTCTTTAGACGGTAGACGTA 24156 30 100.0 34 .............................. AAGAGACACACGGAGGAGGCGGTGAAGCTCCAAA 24092 30 100.0 36 .............................. GTCTTTGCAAGGCTAACCAAGGCGGTCGATTCAGGT 24026 30 100.0 36 .............................. ATAGAGGCTACCTCACCATACCCCTTTGCTAGTGGG 23960 30 100.0 35 .............................. ATGGTTATTCCTCTTCCTCCTTTCATGCTCATTCT 23895 30 100.0 36 .............................. CTCTTTTATACTTCTCTTATCTGGATTAATGTCTTG 23829 30 100.0 35 .............................. GGACCAAAAATAATATCTAAATTACCATTTTCCTT 23764 30 100.0 36 .............................. TACCTACTGGTGCTGATATGCTAGATGAAGCATTAT 23698 30 100.0 36 .............................. TTCATCCCAGCTAACATGAAGCGCAAGATATTATCC 23632 30 100.0 35 .............................. TTCATCCCAGCTAACATGAAGCGCAAGATATTATC 23567 30 100.0 35 .............................. CTAAGCAAATATGGTATTATAAATCTATCAGGAGA 23502 30 100.0 35 .............................. ACCTTATTGTGTACAATGCACTCGTTTTCTTTGCC 23437 30 100.0 36 .............................. AACATATTCAAGATGCTATGCGGGCATGGATTTAGC 23371 30 100.0 37 .............................. GAGTATTATGCTGTAAAAGTGACCGGTGGCAAACGAG 23304 30 100.0 36 .............................. TGTTTACGGAGTGAGTCTTTATCGGCTTCCGTAAGT 23238 30 100.0 36 .............................. TTTTTAGCTTTGTGATAAGGATTGTAAATTCTCCGT 23172 30 100.0 36 .............................. AGAATCGACTAGAGATTATTTTCTCAGCTTCTGAAA 23106 30 100.0 35 .............................. CTCTTCATTACTCGATACAACTCGTCTATCAGATA 23041 30 100.0 36 .............................. CTCTCTTCTGGCTGCATTAATAGCAACTTCAATAGA 22975 30 100.0 37 .............................. AACTGACGAGAAAACGCAAGGAACGAAAGATTTGGGG 22908 30 100.0 37 .............................. GTGGATGACGATTGTTTTCGATTGAGCCAAACTTCTT 22841 30 100.0 36 .............................. GAGCATTGCACAATTGTTCCTCCGTAACCCCAGCTT 22775 30 100.0 36 .............................. TTTATCGGCAGCTCTACCCCCTCATTGTCCATCCAG 22709 30 100.0 35 .............................. AGCGTGCAATTTGGGTGCAGCCCCTCCACGTAGGT 22644 30 100.0 35 .............................. TCGCCTCCTTGCCATTTTTGTCCGGGTTGTCGACA 22579 30 100.0 35 .............................. TCGACAGAGCTTGCGATATCTGCGTGTCGTGTATC 22514 30 100.0 35 .............................. AGAGATAGCGGAGAGTAGAGCTGATAGGTTGCAAA 22449 30 100.0 37 .............................. ATGTAGCATAAGCGATGTGGAGGTAAGGGGTACGACC 22382 30 100.0 36 .............................. GAAGAGACAGAGAACACGCTCAATCAGATAGATAGG 22316 30 100.0 35 .............................. AGAGAACAGAGGAGGTAAAAGAAACCTTGAATGTT 22251 30 100.0 36 .............................. GAGTGAAGAGAGGTTGCCCTTGAGTCCCTTTGTAGA 22185 30 100.0 35 .............................. AAAAAAGAGGTGCGAAAATCAGGGGTAAAAGTCAA 22120 30 100.0 35 .............................. CAAAGGCTACAAATTGGTATGAGCAAAGGTACAAA 22055 30 100.0 35 .............................. AAGACAATGTCATCGGAGAAGCGGTTGTTGTCATA 21990 30 100.0 34 .............................. GATGGATCAAAAGCTACGATTTAGAGCGTGCTCA 21926 30 100.0 36 .............................. AAAACCATACTAGGTGCGCCTATCGCCAGTGGTCTC 21860 30 100.0 34 .............................. CTTTCTAAATGCTTTCGCTTCTGGCTTGTCGCTT 21796 30 100.0 36 .............................. CTCATCTACCTTTTCTTCGTTAATCGTTCGCTCTAT 21730 30 100.0 35 .............................. AAACAAAGGCTCTACAACCTTGCAGACATAACCGA 21665 30 100.0 34 .............................. AACTCAGGCTCTGCAAAGGCAGAGTCTACAGCAT 21601 30 100.0 37 .............................. GAGGTGATGGTGCGTTACGTGGTTACTTCGCTTGCCG 21534 30 100.0 36 .............................. TTCGAACGCTAATCGAACAGCGTACGAATACCCCTC 21468 30 100.0 36 .............................. TCGTCTCAATCACAGAGGGCTTGATACGCGCCGAAA 21402 30 100.0 36 .............................. ACGAGCCAACACTAGAGGAGGAGTTTTTCAAGGCAA 21336 30 100.0 35 .............................. GAGGAGAAACAGATAGAAGACCACACAGACGAGTC 21271 30 100.0 36 .............................. CATTACCTACGAATGTTATAGCATGTTTCTTTGACC 21205 30 100.0 34 .............................. GCAGATAACAAAAACGGCAAATAACAGCATTTCG 21141 30 100.0 36 .............................. ATAGTATAAAGCTAACAAACGCGGAAAAATATCGGG 21075 30 100.0 36 .............................. TACGAAACAAGAAAGGTTCAAACGACTACAACACTA 21009 30 100.0 36 .............................. TTTAACTGTTGTGCGTTGCTGAAGCTTTCTTTTACC 20943 30 100.0 36 .............................. CTTCTTGATTTGGCACGATTTGGAGCTCGAAAGACC 20877 30 100.0 36 .............................. TTCTAAGAAGCCGTCAAATTTGCGTTTCCTTGAGGT 20811 30 100.0 35 .............................. ATCTACAAACTGGAAAGAGCTGGAAGCGAAAGGTC 20746 30 100.0 36 .............................. GATCTTCTGCGTACTCCTTAGCTGTGCGGACTGCAT 20680 30 100.0 36 .............................. AAGGAGAATGATTGGTACGAACGCAATGGCGTTGAG 20614 30 100.0 35 .............................. TAATACAATACTTCATTCTCTACGCTCTCAAGGCT 20549 30 100.0 35 .............................. CTCTCTTATTGATTATCTCTATTATTTGTCCGTGT 20484 30 100.0 35 .............................. ATCCTCAAGCTCTTTGGTGACGTTGAGCGCATGAG 20419 30 100.0 36 .............................. GCTAGAGAAAGAGAGACAACAAGAGCAACAGCAATC 20353 30 100.0 36 .............................. AAGAGCTAGACGGACAAATGCAAGTGGGTGGGCGGA 20287 30 100.0 36 .............................. AAAGTTTTGCGTTTGATCTCGCTCCCACTCGTTACC 20221 30 100.0 37 .............................. GGAGACCGTGATATTGCCCCGCTGCAGAACCTCAAAG 20154 30 100.0 35 .............................. GCAGATAACAAAAACGGCAAATAACAGCATTTCGA 20089 30 100.0 35 .............................. TTGTGCAAGCACACTGGGTGGACAAGCTCAAGTAT 20024 30 100.0 37 .............................. ATGTGGTTCACTAGGCTGTTAACATAGTTGTCTACCC 19957 30 100.0 35 .............................. ATGTACGGAGTAAGAGGGTGGAGGCACACAGTGGG 19892 30 100.0 36 .............................. AGCGAAAGGTCTCGCTGGAGTGCGTGCGACATTGAG 19826 30 100.0 35 .............................. GAGAAGTCACAAGAGGAGAAAACAGAACACATGAA 19761 30 100.0 36 .............................. TTTTTGAACTGCCTTACAACCTCGTCCGCTTCATCT 19695 30 100.0 36 .............................. AGCAGTATCTCTATCAGAGGGTGCAAAGGAAAGAAA 19629 30 100.0 37 .............................. AAGTTGGAGGATAGCAGCTACAAGAGGAGAGATTTGT 19562 30 100.0 36 .............................. TGCTTCTTCCCGTTGCTGGTATAGCTAGGCAACCCT 19496 30 100.0 36 .............................. CGGGTAATTCTTTACACCATCGTAGCAGTGTGTGGT 19430 30 100.0 36 .............................. AGCGGGCAGGGTAGGATTCCAAATCTACGATTACGA 19364 30 100.0 37 .............................. AGAAAATGAACACATATAAAAAATTCTGTCCAAACGT 19297 30 100.0 35 .............................. AGAAGTTCGCCTACCTCTTTCTGTGAGCTAGCTAT 19232 30 100.0 35 .............................. CTTGTCAGACAAGCCAGTCGGCATGGAGGAGGTCG 19167 30 100.0 35 .............................. AGCGTGAATATATCACACTTGCCCCTATCTCTGTT 19102 30 100.0 36 .............................. AGCGGAGCAGATAGAGGAGCAGAAGAGACAATTAGA 19036 30 100.0 36 .............................. ATCCTCAAGCTCTTTGGTGACGTTGAGCGCATGAGC 18970 30 100.0 35 .............................. AAACTAAAAGATTATGAGTAAGAAGGTGTTGTCTA 18905 30 100.0 37 .............................. TGTTTTAAGTGCTTCTGAAGCTTCTCAAGAATTAGAA 18838 30 100.0 37 .............................. TTATTATACTACCCTCTTCACTGAATAAGCCCTTATT 18771 30 100.0 34 .............................. CTGAACTCGAAGCGTGGTTTAAGCTCTTCAATGA 18707 30 100.0 36 .............................. TATTCACCGACCAAACCAAGATACCGCATATTTATG 18641 30 100.0 36 .............................. AGAGAAACCATCATTGACAATAGATTCCGACACGCA 18575 30 100.0 36 .............................. AAGACTGGGTGGCAGACGAACGCCCCAACACCCGCA 18509 30 100.0 36 .............................. ACATCGGACAATACACAGATTACACGCAAGCCGATA 18443 30 100.0 37 .............................. AGCAATACACCGTATATACAGATTCATGCAGAAGCAC 18376 30 100.0 36 .............................. AGGGGTGTAGAGCATTGCACGAAACACAACCTCCCA 18310 30 100.0 34 .............................. TACGAACAGAGCTTGTTGAAGTTCTGTTCTAGTA 18246 30 100.0 36 .............................. AAAGACAGTAGAGAAGAGGTGGTAGACCTATCGAAT 18180 30 100.0 35 .............................. AAGTAGTATCTATATAGTGCTGCACACTTCTGTTC 18115 30 100.0 36 .............................. CTCATGGCGACAAAGCCCTGAGCGTTAGGGATGACC 18049 30 100.0 37 .............................. ATCTTTCATTTTGTTTTTTCCGACCATCCAGCCTTTC 17982 30 100.0 33 .............................. AGGTTAAGGACTCCACCAACGCTTGGACAACGA 17919 30 100.0 35 .............................. TACACGACGCGAAGATCGAAGCGCTTAAGGAGTTG 17854 30 100.0 37 .............................. AGGAGGAGTGGCACGAGCTAAAGGAGAAAGGAATGAA 17787 30 100.0 37 .............................. TGATACCTCCCATCTGCACTCTCATCAAGTGCAGATA 17720 30 100.0 36 .............................. TGGGAACGCTGTAATTGACATACGCACAATTACACC 17654 30 100.0 35 .............................. TTTTGTGTAAAAGTGAGGAAAGTGCGGTTTGCAAC 17589 30 100.0 34 .............................. GATTGAGGGTTGTAGAGTAATATACCCTTTCGCT 17525 30 100.0 36 .............................. TACACGCATACAGCATAAGCTGTGTATTGTTATGCG 17459 30 100.0 35 .............................. CCTCTATCGCATTGCGCTCAGCTGCCGTCACCTTG 17394 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 119 30 100.0 36 CTGTTAATCGTACCATACTGGAATTGAAAC # Left flank : ATAATATTTTCATCAAGACAAGAGGGGTGGTTAGACAAAGAGATTATGGGAATTGAGAAAGCATCTACCGATAATTTCTTGTGAGTATTTTCCTATTTCGAATTACACGCCAATGCGTAAGGATGATAGAGATCATAGACATTTCGAAAACTAATAATATCTTTGTTTGGGTCGCATCAGACTAATAGATGTAAATCATGGTTAGCATTTTAGTGCTCTGTAGGACAGTTCCCATATCATACAATATGTGGTGCGCATAAATTGCTCTATAATGATGGGTTATTCTCTAAATGTCTGTCGATACTGGTGTTCACTAGTATTTTAGACGGTCTATGAAAATAGGAGGAATATTATGTTATTGATAATCAGTAGAATGGACTGTTGTCGTAGGTGCACTCTTATTATACGATTAGGGTTCGACGACATCTTCCAAGCAAAAAGTGCCAAATAAATTTTCTAACAGACTTGTAACCAATGATATATTATAGTAAATTTGACGG # Right flank : TATTCGTCATCATCACGCACCTTATGTTCGATAGTTCTGAGAGATGGGGGGATTTGAGAGAGGGGGAGTGGTCGAATTCTCTAGCGCGAGCGGGGAAATTTATCTCTAGGAATAAAAATATTTATTCCTAGAGATAAATGTTTTTATTTGTGCAGAAAAGTAAATTTATTCCTAGGGATAAATTTGATGGTGAAGTAGACTATTTTTTTGCTGCTGTATATCAAGCGCTTGGGTGAAGGATATTGCGCTGTAAATTGGTATATTTGTACGCTAATGTATAGGTGTGTATGAAGCTAAGGACTGAGGATTTAGTAAAGAAATATAAGAGTCGTACGGTGGTGAACCATGTCTCTATCGAGGTGGAGCAAGGTGAGATCGTGGGGCTTCTGGGGCCTAATGGCGCTGGGAAGACGACTACTTTCTATATGACGGTGGGGTTGGTACAACCCAATAATGGTCGGATTTTCTTGGATGATCGAGAGATTACCAAGGAGCCAATC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTAATCGTACCATACTGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA //