Array 1 37549-37936 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADIWJ010000058.1 Pseudomonas aeruginosa strain P6 contig00058, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 37549 28 100.0 32 ............................ GCTGGCCGAGACCGACAAGTCGAAGCGCACGG 37609 28 100.0 32 ............................ TGTTCGTAGCCGATATCGCTGCACGCGATGCA 37669 28 100.0 32 ............................ GAGGGGCCGTATCGACGGTGATTGATGCGACA 37729 28 100.0 32 ............................ AGCAAGGCATCCGGAAACGGGCCTTGGGTCAC 37789 28 100.0 32 ............................ AAGGAGCACCACGACATGGTCAGAGCAAACCC 37849 28 100.0 32 ............................ TCCTAGTTCTTCGCCAAGCCGGAAACCGAGGC 37909 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 7 28 100.0 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CGAAGTCGTCGAGGACGAACCAGGCCTGGTCGTCGATCAGCAGCGCGCGCAGCAATCGCTGCTGTCGGAAGAAGTAGTGCGGGGCAAGCTGGGTATGGCCGTGCATAGGAGAAATCCTTCTCTGAGCTGTCCGCTGCCTGGCTTCTGCCGGCGCGGCAGGGAGACAGGCCGCTCGTGGGTGTTGGGCCAGCAGGCTGTGGCCTGCCGGGAACCGAAGTCGCCGGCGAAAAAAGCCTACTGACAGCGCCTGTAGGACGGCAATGGCTAAGCCTTGTACGAAGTCTCCGATGGCACAAGCCCGCTGAACAGCTAGGCCGTTCTGAACATTACGCCGGCATGGAGAAAACAGGGGATGGACGCTATGCTTGGGAACCCTTTTTTTGGTGGTTTTTTAAAGCCCTTTTAGATCAAAGGGTTAGAGATCGCTGCAAAAAGAGGGTTTTTCCGGGCTTTGGCGCTGGAGCCCTTGGAGCTTGGAAGGTTGATGGGGTTTTGGTCTA # Right flank : GTAGGAACGCCATCCACTCGAGGTCATGGCGCGTTCACTGTGTAGTGGTCTACTGATCCCGGACACCGATTTAGGCGAGAATCCTCGCCGTGAGAGAGGTGTCTGATGAGCAAGCAACGACG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [45.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 27193-28600 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADIWJ010000063.1 Pseudomonas aeruginosa strain P6 contig00063, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 27193 28 100.0 32 ............................ ATCAGTCGATCCGATCCAGCGTGCCGTTGAGC 27253 28 100.0 32 ............................ TGCCACCCTGTCCGCCGTCGCAGTATCCGTAC 27313 28 100.0 32 ............................ ATGTCCCAGAGCTTGCCAAGCTGCTGGGCCGC 27373 28 100.0 32 ............................ TCGTCGTTGATGCTTTTCAATATCTTTGATGC 27433 28 100.0 32 ............................ GATCGACCTGGTGCATACGCTCCGCCTCGATG 27493 28 100.0 32 ............................ TGATATCCAGCTGCTCCAGGAACCGCTGGCGG 27553 28 100.0 32 ............................ TCTGCGGACGCCAGGCGCCCGGCCAACACGCC 27613 28 100.0 32 ............................ ATCACGAAAACGCGGCGGCCGTACCGGTTGCC 27673 28 100.0 32 ............................ ACATGCCGATCCTGCTTAAGCGACGGGATAAT 27733 28 100.0 32 ............................ AGCACCAGGACCGAACCAGGCGGCGCAAAGTC 27793 28 100.0 32 ............................ CGTCCTGGACTACGAGCACCAGACCCTAAAGA 27853 28 100.0 32 ............................ TCGACAAATATCCTGCAAAGCGAATCAGCCGT 27913 28 100.0 32 ............................ ACAACAGCCGTTCGTCGGAGTTGACCATGCGT 27973 28 100.0 32 ............................ TCGGATTGGAGCGAGTTGGAGAAGCTACAGAC 28033 28 100.0 32 ............................ TCTCCGCCCCAGCTATTGCCGGGGAGGGCATG 28093 28 100.0 32 ............................ ATAAAGCACTTCCACGCCGCGCTTGATGCTCT 28153 28 100.0 32 ............................ ACCGCCGGCCAGCACACCCCTTGGTCGTTCGC 28213 28 100.0 32 ............................ TCTTTGCAATCTACAACAACCCTGATCGACGA 28273 28 100.0 32 ............................ AATATGAACATTAGGTACATATCAGGCGGGAA 28333 28 100.0 32 ............................ TTCACGTTGGGCGTAGGACAGCGCGTCCTGCC 28393 28 100.0 32 ............................ AACAGCATGGCGTCCACCCGTACCGCCCTCAT 28453 28 100.0 32 ............................ TACCGTGGCGACGTTGCAACCCGCTGGTCCGA 28513 28 100.0 32 ............................ TTGAGCACAACCGGCTGAGCCAGCTGGTTGTC 28573 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 24 28 100.0 32 GTTCACTGCCGTGTAGGCAGCTAAGAAA # Left flank : ACATGTGTCCGCGTAGCGCCACCTTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCCGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGTGGCATCGCCCATCACAGGACCTTTCGCGCCCGAACGGCACGCTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGTAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGAAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGAGCTA # Right flank : ACTCGAACCCACCTCGGCCACAACAGCCGCCGGGTTCGCTGCCGTCTAGGCAGAACCACCCTCCCCATCCCACTACCAAACATCCGAATATAAAGTTCCTACCCCGCCCGCCAGCCTCGCCCGTCCACGACAATGTGCCCCGCTTGGAAGCTCACGCTCCTCATACAGACGAAAACGGGGTAGCGGCAATCGGCCATATCCGCTAAACAGTTGCCTTGGCGCAGAATTCGATAGGGACAGGCCACGGTCAGCATGGACGACATTTCTCCCAGCGAACTGAAGACGATCCTTCACTCCAAGCGTGCCAACCTGTACTACCTGCAACACTGCCGGGTACTGGTCAACGGCGGGCGGGTCGAGTACGTCACCGACGAAGGCCGGCATTCGCACTACTGGAACATCCCCATCGCCAACACCACCAGCCTGTTGCTGGGCACCGGTACCTCCATTACCCAGGCAGCCATGCGCGAACTGGCCAGGGCCGGGGTATTGGTAGGCTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGTAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //