Array 1 8991-4876 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMKY01000335.1 Actinomadura darangshiensis strain DSM 45941 NODE_335_length_9003_cov_13.3363, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 8990 28 100.0 33 ............................ CCCGCGGAAAACGGCGCGCGCAGCGACCACGAG 8929 28 100.0 33 ............................ TCCTGCGCGCGGACGGCCTTGTCCGTGTCGAGA 8868 28 100.0 33 ............................ GCCGGCCCCGCCCAAACCACACGCGAATACGTC 8807 28 100.0 33 ............................ TGCCCCGGAGCCGCGCGCCTATCTCCGCATGCG 8746 28 100.0 33 ............................ CCCGCGGAAAACGGCGCGCGCAGCGACCACGAG 8685 28 100.0 33 ............................ GATCGGCCCCGCCGCGCGCGACGCGGCGGGGCC 8624 28 100.0 33 ............................ TCCTGCGCGCGGACGGCCTTGTCCGTGTCGAGA 8563 28 100.0 33 ............................ CGGACGCGCCGCCCGCGACGCCGTTCATCATCG 8502 28 100.0 33 ............................ GTCGCGGGACGCCTGATGACCAAGACGCCGGGC 8441 28 100.0 33 ............................ GAACCTCGACCTCGTCACCGCGCGCCTCGACGT 8380 28 100.0 33 ............................ CTGTTGACGGATATTCAGCGTCGGCTACCGCCC 8319 28 100.0 33 ............................ GGTGGGCTCGTGCGGTCCGCTGAGTGGGGTTGG 8258 28 100.0 33 ............................ TGAGTTCTTCTTTCGTCCATTTGTCGGGCGGGG 8197 28 100.0 33 ............................ CCACGTCCGCGCGGCCGCCGAGCTGTGGGGCGG 8136 28 100.0 33 ............................ GCAAAGCCCGTGGGTGACGTGGGAAGCCGAACC 8075 28 100.0 33 ............................ GGGGGTGTGCCCGGCGTTCTCCCGTACCGCCGG 8014 28 100.0 33 ............................ TACGCCATTGCGAATGCTCGTGGGCGTGTCCGG 7953 28 100.0 33 ............................ CCGTTTCCGGTTTCTCTCGTCCGGGTCACGCCC 7892 28 100.0 33 ............................ GACGTGCACGGCCGTGGCCGGGCGTCTACTGGC 7831 28 100.0 33 ............................ GTCATCGAGGATCTCCCCCACCGGATCGGCCGC 7770 28 100.0 33 ............................ TAGCCGCGGCCCGCGCCTGGGGTGTTTCCCGCC 7709 28 100.0 33 ............................ CCTGACCGACGTCGATCTCACCGACCGCACCAA 7648 28 100.0 33 ............................ GCTCGGAGGGGCGGGCTTGTGGGTGAACCGCAG 7587 28 100.0 33 ............................ CTTGGCGACAGTCGTCGCCGGCACAACCAGGGT 7526 28 100.0 33 ............................ TTCCTGTACCCGGTCAACTCGCTCGTCAGCCCG 7465 28 100.0 33 ............................ GCCAGGGTGCGTCAGCGCGAGCTTGAACGCCGC 7404 28 100.0 33 ............................ GTCGGCGGGCGGGAGGTCCCGAACGGAGTGGTA 7343 28 100.0 33 ............................ GAGACTCTGCTCGAAGTTCTTGACGTCCTAAAC 7282 28 100.0 33 ............................ GCTCGACCGGCTGATGGGCGATGTGCCGATTCT 7221 28 100.0 32 ............................ CCCAGCGACGTCCACGGCCGTCCGACCGGTTC 7161 28 100.0 33 ............................ TTCCCCTACACACCCCCGGCCGCCTCACGGACC 7100 28 100.0 33 ............................ CCCCCGCTGGTGCGATCACCAACCTCGTCGATT 7039 28 100.0 33 ............................ GCAGCTAGCCGACCGGGCCGGCATCTCGCGGGG 6978 28 100.0 33 ............................ CCCTGAAGGTCTACCGGGCCGCGAACCAACCGC 6917 28 100.0 33 ............................ CCGGGGGCGGGCCCTTTTTCGTTGCCCGGTGCT 6856 28 100.0 33 ............................ GTTGTCGGTGGCGTGTTCACGGAGGGTCACGGT 6795 28 100.0 33 ............................ CTGGACGTACACGACCTCCGCGGCGCGGACGGC 6734 28 92.9 33 ...AA....................... CCAGCCGCGTCTCCCCGCCGACGCCGCGGCCGT 6673 28 100.0 33 ............................ TCTCACAGGTGTTCCCTCACTCAACCCCCCGCC 6612 28 100.0 33 ............................ GCCCAGGTCGGGCGCAAGCTCACCTCGGCCGAA 6551 28 100.0 33 ............................ CCCGGCGGCGTTGCGGTTGCGGATGGTGACGCG 6490 28 100.0 33 ............................ CATCTCGCAGGCGGCCCCGGAGGTCGGCAAGGG 6429 28 100.0 33 ............................ ATGCAGATACGAGGAAAGCGAGACGCCGGGGCC 6368 28 100.0 33 ............................ CGTGCCGCGCCCGTCGGGCCGGGGCAGTCGGCC 6307 28 100.0 33 ............................ TGGGCCACCGGGCAGCGTCAGCTCAACGCCGGC 6246 28 100.0 33 ............................ CCGATGTTGTCTACATCGGTGCGTCCAGTAACC 6185 28 100.0 33 ............................ CGTGCCGCGCCCGTCGGGCCGGGGCAGTCGGCC 6124 28 100.0 33 ............................ TGGCATGAACGCTGGTGGGCGGCGCGGGTCGTG 6063 28 100.0 33 ............................ CTTGCCGTCTGATCTGCACCACCCACCCACAGG 6002 28 100.0 33 ............................ CAGGCCAGGGGACTGCCCACTTGTGGTCATACG 5941 28 96.4 33 ...........A................ CCTCGCCGCCGGGGTTGTCCCAGATGTAGCGGA 5880 28 100.0 33 ............................ GCCGGGACGCGCTCGGCGACATCGAGAACAAGT 5819 28 100.0 33 ............................ CCGGTCCGCAGCAGCCTGACCCGCCGTCACAGC 5758 28 100.0 33 ............................ GCGGAGGTCGACCGTGTCGCGGGGATCCTCGGC 5697 28 100.0 33 ............................ GGCGCGGACCTGACCAAGACCGCGCTCGCTAAG 5636 28 100.0 33 ............................ CTGCATCTGCAGCCACAGCGGGATGAGCAGGAG 5575 28 100.0 33 ............................ GCCGTTGCAGGACATGCACTGCCGGTACTGCGG 5514 28 100.0 33 ............................ CGGTACGACCAGGAAGAGGATGATGCCCGGTCG 5453 28 96.4 33 ................T........... CCGGCTTCGCAGGAGCCGGTTGGGCAGCCAACC 5392 28 100.0 33 ............................ GTCCTGCAGGGCCGGCCGGAACACCCCGGCCAG 5331 28 100.0 33 ............................ AGCAGCACGCTGTCGGAACGAGCCCGGCATGAG 5270 28 100.0 33 ............................ GCACCGCCCCGACCTCCACGCCCCCGACATCGA 5209 28 100.0 33 ............................ CTCTGGGACGACATCTGCGCCAGCGTCACCCGC 5148 28 96.4 33 C........................... GTCCGTGCTCGGCCTGAAGGCCAAGAGCGCGTC 5087 28 100.0 33 ............................ CATCCAGACCGGCACCGAGAGCGTGTCGTTCTC C [5082] 5025 28 100.0 33 ............................ GCGGATCAAGGAGCTGTACGAGACGCAGCTGGC 4964 28 100.0 33 ............................ CCATCGGCGGCGCGTCACGGCGGTGAGCGCATG 4903 28 96.4 0 ....................A....... | ========== ====== ====== ====== ============================ ================================= ================== 68 28 99.7 33 GTCGGCCCCGCGCCTGCGGGGATGGTTC # Left flank : ATCTCCGCATGC # Right flank : GTCGCTACCGGATTCGAACCGGCGCAAGTTAGCGCCAGCTGCCCCCGTCTTGAGGCCCTGGCGGACCGACCGTGGCGTTCGGTGCTGGGCGGGGTGCCGAGCCGGGGGGATCGATGCCGAGATCACGTGGACCCTGTCCGGCGGCGGGCACTGCATCGGTCACTACCAGCTGAATCACCACCCTGCTCGACCCGCACCGCCATTCAACTATGGAGATCGTGAAGCGCTACCACCAGCCCTAGGAGATCGAGATGATCTATCTGGAGCTGAAATCCATCACACTGGGTGGCCGTATCCTGCGCTCTCGTACCCCGCAGGCTGCGGCGGTGAGATACGGCGCGGGTCCGCGGCAGGCTCTGCCGGGATGCAAACCTGGCCCACGGAGATATTCTGCACCCCGCCCCCAATGCGAGCGATCAACTGTGTCCAGCGCGGTTCTGTAGGTCTTCATGAACTTGGCGAAGTTGACGACAAGGCGGTCGCATAAATGGCAGCCAGCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCGCCTGCGGGGATGGTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGGCCCCGCACCTGCGGGGATGGTCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [33.3-8.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1331-22 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMKY01000129.1 Actinomadura darangshiensis strain DSM 45941 NODE_129_length_23375_cov_13.89, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1330 28 100.0 33 ............................ CCCGACCCGGTTCGACGTGCCGGGCCCGATCCT 1269 28 100.0 33 ............................ CTCGATCGTGCTCGGCGGGTTCGCCGAGGTGGA 1208 28 100.0 33 ............................ TCCCGGTGGGGCGCCACCGACCAGAGCGGTGAC 1147 28 100.0 33 ............................ CCGCGCCACCCGCAGCACGACGGCGGCTAGATC 1086 28 100.0 33 ............................ GTGGCGAGCGTTTCGGCAGCTCACGACGAGTGG 1025 28 100.0 33 ............................ TGGGCTCCCTCCTACCTGGAGGGCGAGGGCTGC 964 28 100.0 33 ............................ GACGTTCCGGCTTTGCTCGTGCAGTGCGTGCGC 903 28 100.0 33 ............................ GAGCGCGCCCGGTCGCCGCGATAGCGGCACGAT 842 28 100.0 33 ............................ CCGAGCTTCGGCGGTCCAATGCCGCCGGCAAAC 781 28 100.0 33 ............................ CTCAGCTCCGGCCTCTACTCGCTCTTCCAGATC 720 28 100.0 33 ............................ ATGGCACACGGCTTTGAGAAGCCATGTGCTGGA 659 28 100.0 33 ............................ GATGGACGCCGACCACAAGGGCCACCGCAACGC 598 28 100.0 33 ............................ CGATCTGCTCGCCACGATCAGCGTCCACAGCGG 537 28 100.0 33 ............................ GCGGCTGGACACCCAGGACACGAACAAGGACGG 476 28 100.0 33 ............................ CAGCCCATAGCTTGCTACAGCGTTCTACACTTC 415 28 100.0 33 ............................ GCGCATGGAGGCGGTACAGTCGCCCCAGCGGCG 354 28 100.0 33 ............................ GTTCGCCGGCGGCGTCACCTACAAGGTCGTCGC 293 28 100.0 33 ............................ CTGGCGGGTCGTCTGGTATGCGGCGATCGATAC 232 28 100.0 33 ............................ CCCGCCGTCGCGACCGCGCTGCACATCGGGCTG 171 28 100.0 33 ............................ GTCGGCGGGCGCGGTGGAGTGGGGGAGGGCCGC 110 28 100.0 33 ............................ GCGCACAGTCGGCGACGTCGACCCCCAGACCAA 49 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 22 28 100.0 33 GTCGGCCCCGCGCCTGCGGGGATGGTTC # Left flank : TACCACCGCCTAACATTGCAGGTCAGCGAGCGTCGTCCGCCCCGAGCCCCTCCATCTCGCCGGCGCGACGGTCGCCCCCGCGCCGCCCGGGACCATCCGAGCCACCCCCGCCCAGAACCCGGGCGAGCAGTAGCAGAATCCATATGCTGGAACGCAGGGGTAGACTTACCGATGTCATGGATGCAACACACCCATGCGAACAACCTTCGTCCCCCACTTCTGCCAGCGATACCGTCCAACGCCCGGCGGACTCACGGATTGACCTGGCCACCAACTTTGCTCGCGCTCTTTGCCCACAGGGCCCCAAGAGGATCTTGCGTGCACAGGATTGGCCCTTCGATACTCACACCCGGACGGTAGCGAAGCACGCCGACAAAACAACTTTCATGTCTGAAACACGGTGCACAGTAAGATCATCACGGCCGGATGGCACGAGCATGATCACAAACCAACCGAATGAAAATCAGCCCTACTCTTGCTAACGTCGCAGGTCAGCAAGT # Right flank : CTGGGGTTGAACAGGTGGGATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCGCCTGCGGGGATGGTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGGCCCCGCACCTGCGGGGATGGTCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [15.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 13922-16941 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMKY01000129.1 Actinomadura darangshiensis strain DSM 45941 NODE_129_length_23375_cov_13.89, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 13922 29 100.0 32 ............................. ATGTCGGAGGACACCGTCACCGACATCGAGGC 13983 29 100.0 32 ............................. CTCGTGGCCGGTCCCAAGGACCCGGGGCCGGA 14044 29 100.0 32 ............................. CGTCCCGGATCGTCCATGAGCGCCTACTTGGG 14105 29 96.6 32 ............................T GACGTGGCGCGGTTCCGGCGTGGTCTGACCGG 14166 29 96.6 32 ............................T GGCTTCGTAGTTCATCGGGATGATGGCGCGTC 14227 29 100.0 32 ............................. CGCCGCGTGGACAAGGGCACCCGGGTGCCCGA 14288 29 96.6 32 ............................C CCGTCCGGATCACGATCGACCTGCAGCCGCCG 14349 29 100.0 32 ............................. GCCGTCGCCGACGGTGAGCGAATCGCGGGGTA 14410 29 100.0 32 ............................. CCGCCAGGGGGCGGCTGAGGGACGCGGCGCGT 14471 29 100.0 32 ............................. CCCGACTGCGACAAGCCCATGCCGCACGGCTC 14532 29 96.6 32 ............................C TCGACTGGGATGAGGAGTGGGACGAGGAGTAC 14593 29 96.6 32 ............................C TGGATTTGCCTTGCCAGGCCGGCGTTATTGAC 14654 29 96.6 32 ............................T TCCCGGACGCCGGCCAGGCCCCCCGGCTCGGA 14715 29 96.6 32 ............................C TGGATTTCACCGAAATCGTGAATGTGCACGCT 14776 29 100.0 32 ............................. CGCGCGGGGAAGACGTGGGGGATGCGCCGGAT 14837 29 100.0 32 ............................. CATCCTGCCTCTCTATTTTGATTGGAACGGGT 14898 29 96.6 32 ............................C TCCTGCACCTTGGCGTAGACGAGCCCGCGGGA 14959 29 100.0 32 ............................. GATTCCATGGGCTGACTGTAGAGCAGGGGGCG 15020 29 96.6 32 ............................A CACACCGGGTGGTGGGTGGGACTCCTCGGTCG 15081 29 96.6 34 ............................A CGCCCGCCCTCCGAAGAAGGCGGGCGTTCGTGGT 15144 29 100.0 32 ............................. TCCGCTGCGGAAAGCCGGGGACGCTGATGACC 15205 29 100.0 32 ............................. ACATCCGCCGCTACTACCAGACCGATGAGGAG 15266 29 96.6 32 ............................T CCCGAGGATCGGAGGATCCATGACCACACCCA 15327 29 96.6 32 ............................T GGGTCAACACCATCGACCGGGCACTCGTCCGC 15388 29 96.6 32 ............................T GTGAGGGAACACGTCGAAGCCCCGCATACCTG 15449 29 100.0 32 ............................. CCTGCTTTTTCAGCAGTAGCGAGGAATAGCGC 15510 29 100.0 32 ............................. GGAAGTTCAGGCATGCGACCGCGTGGGCCATG 15571 29 96.6 32 ............................T CGCGCGGGACGGTCAGGTAGTGGCGCGGCCGG 15632 29 100.0 32 ............................. CGGCTCGGGTGGCATCCGCTGCGCGCCCAGGC 15693 28 93.1 32 .................-..........C TGAGCGGATAATGAGTCTTATCCGCTGGGCTA 15753 29 100.0 32 ............................. GCGTGGCGCCGCGAGCTGCTGGACGCGCGGGC 15814 29 96.6 32 ............................C CGAGGTCCCACAGGACCGCGAAACCTACGCGC 15875 29 100.0 32 ............................. ACGCCGTTCCCGGTGCGATGCGCGATCAGTTG 15936 29 96.6 33 ............................A GGCGAACCGGGCGCCCCCTGGGCCGGCGCCGTC 15998 29 100.0 33 ............................. GACTACCGTAGACACTGAACCCCCCCCGAGGTG 16060 29 100.0 32 ............................. GGGGATTTCGGCATGTCCACTTTGTCCAGCCG 16121 29 96.6 32 ............................T CGCGCTCGCGGTCATGTCCTGGCGGACCGGCC 16182 29 100.0 32 ............................. CATTACGGCGGTCACCCCCTCGAAACCGTGGA 16243 29 100.0 32 ............................. CGGTGCGCGTTCGCGGTCGACCTGGTCCGCGA 16304 29 100.0 32 ............................. CCTGGATCACGGTCTCGTCCGAGAGCCACCCC 16365 29 96.6 32 ............................C TACGCGGAGTAGGGGGCAGCCGGTTATGGAGA 16426 29 100.0 32 ............................. ACGTCCGACAGGTCGAGGGCGGCCGTGTCGGG 16487 29 96.6 32 ............................T ACGTGTCCGTCGGGATGAGCGAGGTGTAGGAC 16548 29 96.6 32 ............................T CAAGGGCTGACACATGGCGCGGCTACCGTCAT 16609 29 100.0 32 ............................. CGTAACGGCTCGGCGGTGATGGAGCCGCAGGT 16670 29 100.0 32 ............................. CGGCCGCACTCGCACACGCCCAGCGGAGACGG 16731 29 96.6 32 ..............T.............. CAAGAACGCTCGATCGCCCACAGCACTGGCCG 16792 29 96.6 32 ............................C CCGGACGGCGACGAAACCATCGACACCATCAC 16853 29 93.1 32 .............T..............C GGCACGCCCAAGCGCGGCCCGGGCGGCCGGCC 16914 28 96.6 0 .................-........... | ========== ====== ====== ====== ============================= ================================== ================== 50 29 98.2 32 GTCGGCCCCGCGCCCGCGGGGATGGTTCG # Left flank : ATCAACCAACTCTGGGACGAACATGCTGGAGCGGTCTCCGGCGGTGTGAACTGGTCCGGAAGCGAAGACCTCATTCAGCCTGGCATGGGTGACCAGCATCTGGCCATCATCGGCCCCGAATTCGAACCACCCACCAGCGACAGCACAACATGACAACGGTCATCGTCCTCGTCGCCGCCCCAGAGGGACTCCGCGGCCACCTCACCCGCTGGATGGTCGAAGTGCACGCCGGAGTTTTCGTCGGCAACCCCAGCCGCCGCATCCGCGACCGCATCTGGGACCTGCTCGCCACTCGCATCGGCGACGGCCAAGCCATCCTCGTCGAACCAGCCACCAACGAACAAGGCTGGTCCGTCCGCACCGCTGGCAAGGACCGGTGGAAGCCCGTCGACTTCGACGGCCTCATCCTCTCCGCCCGCCGCCGAAACCGACCGAATGAAAACCCACCCACTTCGAGGTAACGCCGCAGGTCAGCAAGTGTCGGCCCCGCCAGGGTGGCG # Right flank : GGCCGCCCATCAGATGCTGCTGTCGGCGTACGGGTTCATGTGCAGACCCAGGTACAGGTAAATGTGCAGAGGTGATCAGCGTGTCGGCCGAGGTGGCGATGGGGTGGTCGTGAAGCCTGCCGGGTGACATTGATCATCCTGGTGGGGGTCGCGGTGGTGCTTGAGGCCGAGCGGTGGCTTGAGTTGCGCCGGTTCCGGGCGTTGCGGGAATCGGGTGCGACGATCTCGGAGATCGCGCGGGAGACCGGGTTGAACTGGCGTACGGTGCGCAAGTACCTGCAGGAGGACGGCCTGGCGGCGGCGCCTCCGACTGCGGCCCCGCGGCCGAGCCGGCGGAATCAGATGATCGCGGCGTACGCGCCGGTGATCGATGCGTGGTTGCGGGCTGAGCTGCTGCTCAAGGGCACGGTCATTTACGAGCGGCTGGTCGAGGAGTACGGGTTCACCGGTAGCTATCAGCGGGTGAAGCTGTATCTGCAGGAGGCCCGGCCGCGGATCGC # Questionable array : NO Score: 5.90 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.73, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCGCCCGCGGGGATGGTTCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGGCCCCGCGCACGCGGGGATGCTCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //