Array 1 1-578 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMCP01000490.1 Streptomyces sp. OspMP-M43, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1 29 100.0 32 ............................. CGCATCTGGCAGGAAAACCAGATGGACGCGGA 62 29 100.0 32 ............................. CGCGCACTACTACCGGGACGACGCCCGCCCGG 123 29 96.6 32 ........T.................... CCGGCCGGTCTGCTGCGGACGATCGCGGGTCA 184 29 100.0 32 ............................. GTCGACTGGTACCGCCAGGCCGTCGCGGCGAT 245 29 93.1 32 ...........G..T.............. TTCGTGCGGGGCGGCGGCGGGTGGCCGGCGAT 306 29 89.7 32 ...........G..T.......G...... GCCAGGTCCAACACGGCTCGCTCCACGTTCAC 367 29 89.7 32 .............C...A..A........ ATCCGTACCGCCGGATCCCCGAGGCCCTCCGC 428 29 93.1 32 ...........G.C............... GAGGTGGAGCGAGCAGTCAAGAAGCTGGTCCG 489 29 89.7 32 ........T..G.C............... AACGCCGCGCAGGTCGCCGAACGGCGGGCCGC 550 29 93.1 0 ..............T..........C... | ========== ====== ====== ====== ============================= ================================ ================== 10 29 94.5 32 CTGCTCCCCGCACGCGCGGGGATGGTCCC # Left flank : | # Right flank : CGCCATGACCTGGAGGGGGAGGGAGACGACAACCTTCTCCCCGCGCACGTGGGCCTGGCGGGCCAAGTCGACACCGGACACCTCGCCGCCGCTCACGACTGCCCCCAGGTGGAGTAGCTGAGGTTCAGGTGCCCGAGCCCGGATAGGTGCTGCGCCTGGTCGACCAGTTGGTTGCTGAACAGTCGCCTCGCTGATGGCTCGCTGTAGCGGTCGATGTGGTCGAAGACGACGCTGTGGTCCTTCATCGCCCGCACCCGCCAGTTGCGCACCTGGTCGGGGGTCAGGTCGTCGAGGACGAGCTCCTGGTCGTCGTCGTCGACGTCGGCCGTCTCTGGCTTCAAGGCCGGAGCGACGGCGGCAGCGCGCGGGGCGGGCAGTATGACCGGTGCCGCCGGCGCGGCCGGGACCTCGCCGGTCGGCTGCTCGGCGGCGGCTTCGGCGCGGGCGGCTTTCGCTTCGGCCTTCTGGGCGCGGTACTGCCTCCACTCGGCCGCCTGCGC # Questionable array : NO Score: 5.49 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACGCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 2684-3569 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMCP01001105.1 Streptomyces sp. OspMP-M43, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 2684 29 100.0 32 ............................. CCGGCACGCTTACCGAGTCGGGTGAGGGAGTC 2745 29 100.0 32 ............................. TCGGATACCGACAGCTCCGCGGACCCGAAGAA 2806 29 100.0 32 ............................. GTCGGGGAGCTGGCCGGCGCCCTCCGCCGCTC 2867 29 100.0 32 ............................. AGCGGGCTCGGGCGAGATCCTGGTGATCGGCG 2928 29 100.0 32 ............................. CCCGCCGGGCTCCAACCGAAACAAGATCACTC 2989 29 100.0 34 ............................. CACGTGGGCATCTGCACCTCGGTCGCCTCGGGCA 3052 29 100.0 32 ............................. GGGAGTCGTCAGGGTGACGTACGTTCCGGTGT 3113 29 100.0 32 ............................. CAGAGCGGCCCCGCGGCTGCCCCGAAACCCCG 3174 29 100.0 32 ............................. GGGCGCCGTGACCTCCCGGCGCTCGACCACTG 3235 29 100.0 32 ............................. TCCTGAACCTTCCGCATCCGCGGGGTGGGCGA 3296 29 96.6 32 ......................A...... CCCGGCCGCCGCCGAGCACAGGCCCGCCGACA 3357 29 100.0 32 ............................. ACCCGCACGCGGGCCGCGCTCTCCTCGGGCGC 3418 29 100.0 32 ............................. ACCGCCCGGCGCCGGGTCTGCGGCACACCGTG 3479 29 96.6 32 ............................A CCGCATGATCTTGCGGATGTTCCAGGACAGGG 3540 29 100.0 0 ............................. | T [3565] ========== ====== ====== ====== ============================= ================================== ================== 15 29 99.5 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : TTGCCTTCCCGATGTCATGCACCCCAGCCAGCCACACCAACAGCCGCCGGGCATCCTCCACCCCGCCGGGCAACGGCCCCGCGATCACATTCCGAACCTGCTCGGGCAGCCAATCGTCCCACAACAGCCCCGCCACAGCGGCACTGTCCTCCATGTGCCGCCACAACGGCAGCCAACCCTCCGTATCCCGATCATGCTTCGCCCACACTCGCCGAACAGCACCCTGCAGCCGCCCCCCAAGGCCCGAACAGGCCCCACCCTCATCAGCCATGTCAGATGAATACAGGCAAACAACCGAACAACACGCCCTGATCAGAAAATCCGATGGTTCTCCGGTCGACAACATCACGTCAACCGACAGCTCGCCGTAAGATGCGCCGACGTAATCCACGACCTAGCACAACGGACAGCAGGAAGATGGCGAAATAATCCATATGCCGGAATCAGTGAAAGTGTGTGAGATCTCGGTCCTCCCGCTGTAACGCTGCAGGTCAGGAAGT # Right flank : GGGCCAGATGTTCCACATCCCGGCGTACACGCTGCT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 673-1008 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMCP01000374.1 Streptomyces sp. OspMP-M43, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 673 29 100.0 32 ............................. CGAATCCGGCTACCCCCGGTTTTGAGAGAGTG 734 29 100.0 32 ............................. ATCGTCCTGGACATTCAGGCGTCCGGCGGTAC 795 29 100.0 32 ............................. GTTCCGGGAGCAGCGCACCGGGGCGGGCCTGA 856 29 100.0 32 ............................. CTCGACCCGCAGGCCCAGGCCCGCGGGAACAT 917 29 96.6 32 ..........................T.. CGGTCAGTGACCCGGGCGATGAGTTCCTTCGT 978 29 82.8 0 ........T............G....GTT | C,G [990,996] ========== ====== ====== ====== ============================= ================================ ================== 6 29 96.6 32 GTGCTCCCCGCGCCTGCGGGGATGGTCCC # Left flank : CAGGTCGTCGGCGGCCTGGAGCGCCCGTTCCCGTGCCTTTTGGACCGCAGCCGTGCTTGTCGGCCGTCAGCACGTCGTAGGCGGCCTGTACGGCGTGCTGCGCCGCCCCGTCCAGCCTGGGCAGCATCAGGCTCACTCGAAGCCTGGGCGGGGCGGGTCCAAGGCGGGCGTGTGTCGCGCACGCACGAGGCGCAACCTTGACCACGGGCCCCGTGGCGGGCGTTCGGTCCCGGCGCGCCACACGCCGGCCGTCCGCCCCGGTGCCATGTGCTGCCATGCGTGCGGCCGGAGCGGGGAGTGCGGGGCACCAGCCCAGCTCGGGACCCATTGCTGTGGGTGGTGTACCAGGGAGCATGGCGGGAGACATGGCAGCAGTCGGTGACCCGCCTTCACGTGGCGAGCGCGGTCCCGTCCACTCAAGGGCCGAGTGCCTTCGGGGCTTTGGTGAAAGTGAAGGAAAACTGGTGGGTGGGGGCGGTAGCGTCGCAGGTCACGAAGGG # Right flank : TCATCCGGCGAGCCTGGCCCCGGCGGCGGCGATCAGGTTATCGGCGGCCTGGAGGGCCCGTTTCCGCGCCTCCTGGAGCTCCGCCGTGCTTGTCCCGCATGTCGTGGCGGCCTGTACGGCGTGCTGCGCCGCCTCGACCAACTCGGGCAGCAGTCGGCGCACCCGTCAGCAGAAGAGGCATTTACACCCTTCCCGGCAGCGGGCGGGAAGGCGCGGCCGACAAATTTTTGGATAGTCGTGAAAAAGAAACAAGATGCGCCTTTCCCGATATGATTGGGACGCAGCGAACATCGGTTCGCAAAATTATCGAAAAGGGAAAAACTGTGACATCAGTGCGACGAGGTTTGATTCTTGTATCTAGCGTGATGATTGCCGTAGCTGGCGCTATGGCTACGGCAACACCCGCAGCCGCAGTGGGAGGGTGCCCTGAAGCTAGATTCTGTATGTACAGGGGGGCAGACTTTAACAATAGAAACTTTACCATGGCGAGTACAAATGCA # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCCTGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCCTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 2467-1524 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMCP01001277.1 Streptomyces sp. OspMP-M43, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 2466 29 100.0 32 ............................. GGCAACTCGTCGTGGCTGTCCGTCGAGAACGA 2405 29 96.6 32 .....................A....... TGAGGGACTTCAACGCGTTGGTGTCGCAGATG 2344 29 100.0 32 ............................. CGGTCGGCGATCTGGTTGATGCGTCCAACCAC 2283 29 96.6 32 .................A........... GTGAGCGAGTCGAGAACGGCGGATTCCTTGCG 2222 29 100.0 32 ............................. CGGACCCACCGGAACGCCTGACCTGGGCATTC 2161 28 93.1 32 ........-........A........... GTGTGGCTGCGCTCCAGTCTCGTACGGTGGTC 2101 29 96.6 32 ........G.................... TCGCCTCGGCCACTGAGGAAGTTGACGCTCGG 2040 29 96.6 32 ............................T CTGCCGGTCGCGCCGCGCCACAAGACAGGCCG 1979 29 96.6 29 .............A............... GGGGGCAGCCTGTTCCCGTACGCCGACGC 1921 29 89.7 32 ..C...T..C................... CCGAGGACGGACGCGCGGGACTTGGTGCGGCG G [1916] 1859 29 93.1 32 ..C..................G....... GTGCAGTTCGAGGACAGCGACGGCGTGATCGA 1798 29 89.7 32 .........T...........C......T GCAGAGTGCCGGATGGTCGTCGCTTCCGGGAC 1737 29 93.1 32 ...........A.C............... CAAGCGGCCCACGCCAGCGGAGCCGGGCTCGC 1676 29 93.1 34 A....................G....... CCTCCAGCCGCGACACCTCGGCCGCCGCCGCATG 1613 29 93.1 32 .............C.......G....... AGGTCCCGGCCGCAGTACTCCTCGACGAGCCC 1552 29 93.1 0 ...........................TG | ========== ====== ====== ====== ============================= ================================== ================== 16 29 95.1 32 GTGGTCCCCGCGCGTGCGGGGTTGTTCCC # Left flank : | # Right flank : CCGCAGACGGTCAGGACCGTGTGCGTGCTCTCCGTCTCCTCAGGTGCGAGGTCGCTCTCTGGTAGGGCGGCTCCCGCCCTCCCGCTGGACACCCAGGGGGCTCACGGCGGGAAGCCTGCGCCGGTCGTCGCCCTGCCTCCGATCACGGTCGCCGCCGCCCGTCGCGCTGCGGCCGGCGAACGGCGGAACGGCAGAGCGCCCGGCCGCCGTACAGAGGAGGTACGGCGGCCGGGCGCTCCGGTTCACGGTTCAGGTCGGGGGAAGCGGCATCGGGGGGACAAGCCGCTTCCCCCGGTGAGAACAGGGCCAGCTGGTCCTCCGCCGCGGTCAGGGGGGATCGCGCGGCGGTGACCCCACAGAGAGGCCCTGTTCCGGGCCCTCCGGGTCCTGCCTGGTCCCGTTGGGCTCGCTCTCCATCCTGCCGGGCGGCGGGAGCCGTGTGGTCGGGCGAAAGGCCTCGATGGTGGGGACGTAGGTCCCTAAAAGGCGCATCAGTGATC # Questionable array : NO Score: 5.30 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGTTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [33.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.01,4.91 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], // Array 1 2-753 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMCP01001367.1 Streptomyces sp. OspMP-M43, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 2 30 83.3 31 ...........A.CC........A.....T GCTTGAAGCCGCCGAACGGCGCGGTGCCGCA 63 29 83.3 31 .....-.....A.CC..............C CAGCCGGGCGGGGCGGTCTTTCCGGAGAACG 123 30 90.0 31 ...........A.CC............... AGTGCTTGCAGTCGGCGGACGGAGCCGAGGG 184 30 96.7 31 .............................C AGCTCGTGCTCGTCGACACGGGGGCGTCGTC 245 30 100.0 31 .............................. CCCCGGTCGGCACGATCACCCTCGAAACGCT 306 30 96.7 31 .............................A CGGACTGGGTCGCTTCCCGGCCCCGGCTGGC 367 30 100.0 31 .............................. GCCAGACCCTCGACATCACCACGGAGAAGGG 428 30 86.7 22 T............A............T..T CCATGCCGCCGTCCTCGTCGGT Deletion [480] 480 30 90.0 31 ...........A..C.........T..... CCCAGCGCGGCGCGGTGTTCGGCACCACCGG 541 30 86.7 31 ...........A.CC..A............ GCCTGCACGGGAACGTTCAGGTACAGGCCGC 602 30 93.3 31 .............C...............C AGCTCGGCCGTACGACCACGGACCGGATGGC 663 30 83.3 31 .........A...AC.T............A AGAAGGGCGGGGTCATCGAAGCGCGGGAGCT 724 30 80.0 0 .C.......AT..AC.T............. | ========== ====== ====== ====== ============================== =============================== ================== 13 30 90.0 30 CTGCTCCCCGCGCGTGCGGGGATGGTCCCG # Left flank : TC # Right flank : GTGTACGTGGCGCCATCGGCGCGGATGAGGCTCTGCTCCCCGAGATGATCCCCAGTCGCGGCCTGGGCACGGGGGCTTCGGCTTCTGCTCCGTGCGGCGAGCGGCTCCGTGCGACGCCCAGACATCCTCGCGTCTTTGCGGGGTACGCGGATGGCGTACCGCTCTGAGGAGGAGTCATGGCCGGACTGATCGCCCGTCTCACGCAGTTCTCCCGCAGCCCTCAAGGGCGGCGGACCATTGCGTCGGCCAGGCGTGGCGCGGCGGACCCGCGTAAGCGCGTCCAGGCTCGCAGCCTGTTCGGTCGGCTGCGTGGACGCCGGTGACATCGGCGCTTCGGTAGACGACCGGAGGCACTTGCTGACGTTGCTCATCGGAGTCTGAGATGAGGGGGGCCTTGGGTGGAAGTCGAGCGCTACTCTGGGCATCCGGCGTGTTGGAGGAGAGGCATATGGCGAATGAGGACTGGACAGTGGACCGGTTGCTCGTCGCCCTGCCCCACT # Questionable array : NO Score: 4.97 # Score Detail : 1:0, 2:3, 3:0, 4:0.50, 5:0, 6:0.25, 7:-0.04, 8:1, 9:0.26, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCGTGCGGGGATGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCGTGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [11-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [1.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 6988-7624 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMCP01000100.1 Streptomyces sp. OspMP-M43, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 6988 29 100.0 32 ............................. GACCGCACGCCGATCATCCCGACGCGGATCAT 7049 29 100.0 32 ............................. GGTGTCGGCCAGTGGCCCGGGGCCGGCCAGGA 7110 29 100.0 32 ............................. CCGCCGAGCTCCGCTTCTACAACGACAAGGGC 7171 29 100.0 32 ............................. AACGTGCTTCGGAAGAACATGTCGACCGACCA 7232 29 100.0 32 ............................. AGCTCGTGCTTCCACAAGTCCTTCTGGTACTG 7293 29 100.0 33 ............................. ATCGACAAGGTGTTGTCGATCGGGTCCGCAATC 7355 29 100.0 32 ............................. GGGCGAGCCGTACGTCGGGCTCAAGGCGTGGC 7416 29 100.0 29 ............................. GCGGGAAAGTCTCCTCCAAGGTGGCTACC 7474 29 86.2 32 TC...G.T..................... GCCCCAAGGCCGCACCTCCGGTAGGCAAAAGG 7535 29 100.0 32 ............................. GGCGTCTCCGCCGAGGAGCGCCGCCTGCTGGA 7596 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 11 29 98.7 32 CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Left flank : GAGCGACAGAGGTTTGAATGTGGCGTCCGGAGTGAACTACGGAACGGACGAGCACGAAGCAGCAATCTGGTGACCGTGATCGTCCTCACCAATTGCCCTCCAGGCCTGCGGGGCTTCCTCACCAGATGGCTCCTGGAGATCTCCGCCGGCGTGTTCATCGGCAATCCTTCATCCCGCATCCGAGACGTGCTGTGGGACGAAGTCCAGCAGTACGCCGGACAAGGCCGTGCGCTTCTCGCCCACACGACCAACAACGAGCAGGGCTTTACGTTCCGTACCCACGACCACTCCTGGCACCCCACCGACCACGAAGGTCTCACGTTGATCCAGCGCCCCATCGACAGCAGGGGCGCAACGAGTAGTGCGAAGAGGCCAGGGTGGAGCGCAGCATCCAAGCGCCGCCGATTCGGAAAGAGATAGACGAAATGTCTGATATCTCGGAATCGGTGAAAGTGCTCGAGGAACTGATAAGCCAACGGTAAAGCTGCAGGTCATCAAGT # Right flank : CCCGCGGTTCGGGCCAGCGTCGGGTACGGTGTCGGCGGCCGGGCCCGCCCGCTCATGGGCTGGGCGGGGAGCGTGGGTCAGCCACGGACCCTTGGCGGCCCTCAGCGCCAGGCTTCGCTCGCTCTGGAAGACTCGACCCCGGGAAGATTCTCACTGCGGTTCGAGGTAACCACATCCTTCGCCACGATCAAGCCCAGCCAGTTGCAGTGCCTCGTCCTCGCCGACGATGTTGCGTCGGCGGCGCTGGGCAGGACTCTTCATGGGCACGAAGTCGCCCTCAGCGCTCGCTGCGACGAGGGCGTCCCCTGGGCTCGGCCGGTGGCTTGCGGGGCCGTGGTCTCGAGCAGCGCGGGGCGGTGACGCTTGATCCAGCGCCGAGCCATGAAGGGGCAGGGCCACGACAAGAACGCTGACCACCCCGTCAGAAGGGCCCGCGTGATCGTACGGCGGCGATGATTCCCAGCCCCGCCCCGACGGCCAGGACGAGGAGCCCTCTCAGC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //