Array 1 19702-19310 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAPAP010000006.1 Azotobacter chroococcum strain W5 BHFICIGG_6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================================================================= ================== 19701 29 96.6 32 ............T................ TCGCTGCTGAGCGGCCTGGTTGGCTGGGAGTT 19640 29 96.6 32 ............T................ GGAGGGCGCGCAGATGGCAAGTGAGCGCACCT 19579 29 100.0 33 ............................. CGGTATGCCACGAACAGGGCATGTCCTGCCTGC 19517 29 100.0 32 ............................. GCGCAGACAACCGCAGGCTTCGCCGGTACGCC 19456 29 72.4 89 ..............C.GA..A...GTT.A ACGAAGGTCTTCGTCGGACTTTCCGACGAATGGCACCTCCTTGCCTGGCCCGGGCAGTGGGGGCTGTAGCTCTGCCCATATATTCTTTG 19338 28 86.2 0 .CTA......-.................. | T [19326] ========== ====== ====== ====== ============================= ========================================================================================= ================== 6 29 92.0 44 GTGTTCCCCGCGCCTGCGGGGATGAACCG # Left flank : GGCCAGGATCATCCCGACCATCGAGGAGGTGCTGGCCGCCGGCGGCATCGCCCCGCCCGAAGCGCCGCCGGAATCCGTGCCGCCGGCCATTCCCAACCCGCAAGGCATCGGCGACGCCGGGCACAGGACGCAGTGATGGCCTTCGTCGTCGTGGTCACCGAAAACGTCCCGCCGCGCCTGCGCGGGCGCATGGCCATCTGGCTGCTGGAGGTGCGCGCCGGCGTCTATATCGGCGACGTATCCCGGCGCACCCGGGAAATGATCTGGCAGCACCTGGCCGAGGGGCACGAGGACGGCAACGTGGTCATGGCCTGGGCGAGCAACCACGAGTCCGGCTACGAATTCCAGACGCTGGGTGCGAATCGACGCTTGCCGGTCGAGTTCGACGGCCTGCATCTGGTCGCCTTCCAGCCCCAGGAAAAGCCCGATCTTTAACAAGGAAAATCGGTAGATTCTTGGCGGCCGATTTTTTCCTTTGGAGACAATCGGTTACGCTAAGT # Right flank : GGACACCCTGCGACCATGCGCGTAGCCAACGAGCATTCCCCGCTTTCGCGGGGCCGATCCGCAGGGCCGGTGGATCGGGCAGGCCGCGCGAGCGGTCTGTCCGATTCGTCTTTCTCTCCCTTGTCGTTTCCCTGAGAACGTCGCTCAGCGCGGGCCGATTTCCCGGCGCAGGGCGGCGAGGCTGCGCTGGTGGGCAAGTTCGGCCGCAGCCTGGTCGTAGTGCCGGCTGCCTGTGCGGGCGAAGGCGTGCTCGCAGCCGGGGTAGCTGTACAGCTCGATGTTCGGCCTGCCGCCCAGACCGGCCAGGAGTGCGACGCGGGCCTCGGCCGGGCAGAAGGCGTCCGCCTCGGCGATGTGCAGCACCAGCCTGCCGCGGATGCTGGCGGCCTCGTCCAGCAGATGTTCGATGCCGACCCCGTAGTAGCCGATGGCGCAGGCGACGTCGCTGCGGGCGGCGGTCAGATAGGCGAGCCGGCCGCCCAGACAGAAGCCGACGAAGC # Questionable array : NO Score: 4.52 # Score Detail : 1:0, 2:3, 3:0, 4:0.60, 5:0, 6:0.25, 7:-1.02, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCTGCGGGGATGAACCG # Alternate repeat : GTGTTCCCCGCGTCTGCGGGGATGAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCTGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 23643-23974 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAPAP010000015.1 Azotobacter chroococcum strain W5 BHFICIGG_15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 23643 28 100.0 33 ............................ CACTGCGCTTGATAAGGCCCGCGCAGCAATCGC 23704 28 100.0 33 ............................ TCAGTGCCTGTATCGCAGCCCGATACGCCTCGG 23765 28 100.0 33 ............................ CGCGCAGGAGCAGGATTGACCGGAGCAGGAGCG 23826 28 100.0 33 ............................ CGTAGGGGACGAGAGCAAGGCGGATCGGCGCGG 23887 28 100.0 33 ............................ CGCCGCGCTTGCCAAGGTCGATGCCCTTGAAGG 23948 27 96.4 0 .....-...................... | ========== ====== ====== ====== ============================ ================================= ================== 6 28 99.4 33 GTCTTCCCCACGCCCGTGGGGGTGTTTC # Left flank : TCTACAAAGAACAGCTGTGCATCGACCTGGCCTTCTCGCTCACCCGCGAGCTGGCGGGCCGCTACGACAAGCACAAGGTTTCCGCCGGGTTTCGTCGCCGGGTGCTGGAAATGGACCTGCTGGCCAAGGTGGGCGACGACATTCAGGACATCTTCGGAGTGAGCCGTGCTCGTCGTAATCGCAAATGACCTGCCGCCCGCCGTGCGCGGACGCATGAAGCTCTGGTTCGTCGAACCCAGGCCCAACGTCTTCGTCTCCGGCATCAAGGACTCGGTCGCCGTCACGGTCGTCGACTACCTGTACAAGCACTGCCCGCCAGAATCCGGTCTGGTGATCTTCCGCTCCCTGCCGCATCCGCCCGGCTACGAAATCAGGACCATCGGTCCACCCAGAAAACCGATGACGACCCTCTCCGGCCTGCAGCTCGTCATCGAAACCCTGACGCAGGCGTAATCGGCAGATCTTGTGTCTGCAGCCTGGCTCATTAACAATCTGTTGGT # Right flank : CCTCCTTGAGAGCGTCGCCGGTCTTGTCCAGGGCGTCTTTCCCACGCCCGCCATCTCCCGCCTCCTGGCAATGTTTCAAGCGGCTGGGTTTTCCTGCGCCATTGGTTGGTTCCTGTCTCCCTCCGTCCAGTCCGGTTAGGCCGCCCCGCCACCGGTCGCCGTCGCCGTCAGCCGCTCTGGAAGCGTCCATACTGAAAGGCGGAGGTGAGTCCATGACCGGTTCCGTGCAGATTCTCGATACCGCCCTGCAGGTCGCCGAGCGCAGCGGCTGGGAGCGGCTGCGCCTGTTCGACGTGGCCGCCACGCTGGGCATCGGGCTGGACGAGGTCGCCCGTCACTACCGGGACAAGGACGCCCTGGTGGAAGCCTGGTTCGACCGCGCCGACGCGGCCATGCTGGCCCGCGCCCGGGATGCCGGTCTGGCGGTGCTGACGCCGGCCGGGCGGCTGGAGGAGCTGCTGGTCGTCTGGCTCGCGGCGCTGGCGCCGCACCGGCGGCTG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCCCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //