Array 1 20995-17254 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPAG010000044.1 Enterocloster clostridioformis strain J1101653_170612_A4 NODE_44_length_35758_cov_35.4004, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 20994 32 100.0 34 ................................ ATTTTAGCTGTTGCGTTTGCCATCTCTACATAAC 20928 32 100.0 34 ................................ TGCTCCATGATAACCGGCACGACATCCGACAGCA 20862 32 100.0 34 ................................ CTTCCTTCTCCCTCTGGTAGATGGCTTTATAATA 20796 32 100.0 34 ................................ GGGCGTAGGAGTATTGGTGTTCAGGAGAACCATT 20730 32 100.0 33 ................................ AAAGACATACGTCCCGGTTTATGTGGAGGCAAC 20665 32 100.0 36 ................................ TGGGTATATGTAGTGACATCTGTTATCGTACAGGTA 20597 32 100.0 34 ................................ CAGTGCCACGACCATCGCTATACCCATTATCACC 20531 32 100.0 36 ................................ ACGGAAATCGGAACACTGTTGCTTGATGTCTATAAC 20463 32 100.0 37 ................................ GGTAGTAGACGGCAAGGCAACCAGAGTCGGATTTGAA 20394 32 100.0 34 ................................ ATCCGCGCGGCGTCGCGTTTACCAGTGCCTCTGT 20328 32 100.0 34 ................................ TGTTGATGGATATTCGGACCAGCTCCAGGAGAGG 20262 32 100.0 33 ................................ TTCCTTAACTCTCAAATCAATACTGGCATAGAC 20197 32 100.0 35 ................................ AAAAAAGTACCTATTCTGTCCATCCGTGGTTATGT 20130 32 100.0 34 ................................ TCCGGTATCTGGGAGGCATTGAAGGAGCTTGTAT 20064 32 100.0 35 ................................ CCTCAGGCTTCCCTTGATGCTGTCTATGGAGGCTT 19997 32 100.0 33 ................................ AATACGACATTAAAGGGCTGACCGTGGAATTTG 19932 32 100.0 35 ................................ AGCTCTTGCCAGTCGATGAATGGGCCGTTGTCATG 19865 32 100.0 35 ................................ GCTATAGCTATCCTTGAATACAATCCCATAGATAC 19798 32 100.0 34 ................................ AAAGATAACGTCACCTGCTGCGGCTGCGGAAAAG 19732 32 100.0 34 ................................ TACCATTCCTTTTGCCATAGCAAGGGCCATCTGG 19666 32 100.0 33 ................................ TTCTGTCTCTTTGATTAGTTCGCAGGCATCTAT 19601 32 100.0 34 ................................ CATACCGGATTCCCAATCATTTGATAAGCAGGCA 19535 32 100.0 35 ................................ AGAACCAACGAGACGGGCTTCGTCAGGACGTATAT 19468 32 100.0 33 ................................ CTAGAAAGGTCAACATGTTGCATATCTCACGGG 19403 32 100.0 35 ................................ GTTTCACCTGCCCCTGTGGTATATACCAGTCCAGC 19336 32 100.0 35 ................................ AAATGTTATAATGTCAAGAAAGTCGCTTGCCCGTT 19269 32 100.0 33 ................................ TCGTTTACCGCATCGAATGCCAGTCCATGTTCC 19204 32 100.0 34 ................................ CTCCGATTAATCTCTGCCTGTTGCTCACTGGTAG 19138 32 100.0 33 ................................ TCACCCGCCAGCGTTTTCCCACACTGTGCAATA 19073 32 100.0 35 ................................ TGACAGACGCGCCTGGAGATAATTGCACCAAGGTT 19006 32 100.0 34 ................................ TCCATCATACCAGCTTAATACCGGTTCATCTCCC 18940 32 100.0 33 ................................ CTCAAACGTGACAAACTCAAATGTCCGGTTCTG 18875 32 100.0 34 ................................ AAAATAGCAATTTAGGTAATATCAGTGCGGACCT 18809 32 100.0 35 ................................ TCAAAAAGCATTAAATGAGTTGGCAGACAATTTAT 18742 32 100.0 34 ................................ ATAATGAGGATACGCCACGGAGTGGTCGTCTTTC 18676 32 100.0 34 ................................ TTAGTTTTTAAAATTTCGATTTTGAATAATTGCC 18610 32 100.0 33 ................................ TTCTATGGCCTCGGCAAACATTGGCAATCCCAA 18545 32 100.0 33 ................................ AAAGGATTGCCAACTTTAAAAGGTTCAGAAAAA 18480 32 100.0 33 ................................ TGCCTGTCGCTTGAATATCATTCCTATCACCTT 18415 32 100.0 36 ................................ TCCAGCTGCTCAACCTTGTAATTGTCTGCGGTTTGG 18347 32 100.0 33 ................................ ATCAATTTACTATCCCAAGCCGTCACCTGGACG 18282 32 100.0 36 ................................ TCCTTTTTATCTAACTGAACGGCAGACCCTCATCCT 18214 32 100.0 37 ................................ ACCTGTTCCGTATCCAGTCTGGGAAAATGGTGGAAAG 18145 32 100.0 35 ................................ AGAAAGCCTGGACGGCCCAATAAAACTGACACAGG 18078 32 100.0 33 ................................ CCAGGTGGGGACGGCAAGGGCCTCTAACGCTTC 18013 32 100.0 33 ................................ ATTGAGATACCACCTTTAATTTAAAGAAATCTT 17948 32 100.0 35 ................................ ACAATGACAAGAAAAGGCCAGTGGGACTTGATTTG 17881 32 100.0 35 ................................ CGAAATTTTACGCTGAACCGATAGCATAACGAATG 17814 32 100.0 35 ................................ ACACCGGAAGAAGCACAGTATGCCGTCGATAATGT 17747 32 100.0 35 ................................ CTGTTAAATGAGTGCAGCGTGGTCCCTCCCATATT 17680 32 100.0 33 ................................ TTCATCCACACCGCAATAGATTGTATAATCATC 17615 32 100.0 35 ................................ CTAATTGGTCGTTTTGGGAGGCCTATAATTTGCCG 17548 32 100.0 35 ................................ AGACCAGTATGCATCAAAAGTTGTAATGAGGTCAA 17481 32 100.0 33 ................................ ATCTTTGCTTTTTGCCTCACGGTATTCTTTGCA 17416 32 100.0 33 ................................ ACCGCAAGATGGGCACAATCCGATATTCTCTTT 17351 32 100.0 34 ................................ TCCGGGGTAGTCTCATAGCCGTTCACATAATAGC 17285 32 68.8 0 ......G.T......TC....CAAG..A...A | ========== ====== ====== ====== ================================ ===================================== ================== 57 32 99.5 34 GTCTCCACCCTCGCGGTGGAGTGGATTGAAAT # Left flank : GCTGGTACTGATTACATATGATGTGAATACGGAAACCGCCGCAGGCAGGGCCAGGTTGAGAAAGGTTGCAAAGCAATGTGTCAATTATGGCACCCGCGTCCAGAACTCCGTATTTGAATGTATTTTGGATAATGCCCAGCTGATAAAGCTAAAGGCGATACTGACAGATATAATTGATGAACAGACGGACAGCCTTAGGTTTTACAACCTTGGGAATAAACACACTACAAAAGTGAACCATGTTGGGATGAATAAGGGGATTAATGTGGAAGAACCGCTGATATTCTGACCTGGCCGCGGGCGGTAAAGCGGTATAAAGTATTTTGGTGCGAACCTGAAGCAAACATGGATTTACGGGGGGATTCGCACCGGAAAATTTGCACAATGAGAACGGATTTGCGAGTGTGCAGGGATGGTTGGCCGTGATTTGAGGGGGGTGGGATATGATTTGTTTGTGGAAATGTGATGAAGAATAGTAGTGGTTATTGTGTAGTATTTCT # Right flank : TCCGCCAATTACAGAATTACATCCAGTTGCCCTCTCCTCTGCCCTTTTCGCAAACGCCGCAATCCCTTTTGAACTGCAAAAAGGTTAGGTAAAACTAATTCCGTACAACAAAAAAGATGGGGCATGCCCCATCCCTTCCATAATCTTGTTAGAATGTACAAAGAATGCATACTTCCATTATCCCTTCCATGCCCGAATCTCTTTAAGCCCCGGCACCAGCACCTTAGCGCTGGTTTCCAGAATGATCCGTCCCTTTTCAGCTGTGGCGCCTGAGGGGTCCCCGCCGATTCCGATGGGTTTGCCGTCTTCTGTTTTCCAATCCTCGGATACCCAGCCAATGGATACATTTCCGTAAGGTTTCAGCGCCTGATTGTCTTTAAATGCAGTGGGAATTCCCGCCTCTGAGGTCTCTGACTTTACCAGGGACGGGTCCACGGCCATGACCATGGAGGTTTCCATTTCACCTCCATGGAAGTCCCAGATATTTCCTTCTGAAATCG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCACCCTCGCGGTGGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTCCACCCTCGCGGTGGAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.00,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 87084-82609 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPAG010000009.1 Enterocloster clostridioformis strain J1101653_170612_A4 NODE_9_length_102760_cov_46.3651, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 87083 33 100.0 36 ................................. AACAAAACGTGGTGATAGATTTCTGATCTTATCATC 87014 33 100.0 34 ................................. CAAAATATGGGTGTGAGATTGTGGGTAGTAGTGC 86947 33 100.0 33 ................................. ACAACTGCATGCGCATCTATATTTCCAGCCTCA 86881 33 100.0 34 ................................. ATAACCAACGTAGCGCCAGTCATAGCTGCATGTT 86814 33 100.0 36 ................................. GACCACAGAAAAGAAGCTGGTGCAGATAACCGGTAC 86745 33 100.0 33 ................................. AGCTTCAAGGGAAAACGGTCGGTTGGGGACCCG 86679 33 100.0 34 ................................. TTATCTTCCTCCGTACATCAACAAATACATGATG 86612 33 100.0 35 ................................. ACAGGTCTGCTTGTATGCTCAGAGTGTGGTTATAA 86544 33 100.0 37 ................................. TCCACCGTGACCGTGGTGAGGGAATTGATGTCATATA 86474 33 100.0 35 ................................. ATTCAAAATGTTGTTAACCTGGCCTGGACTGCTAT 86406 33 100.0 34 ................................. GGAAACAGCGGTATTGTAATTACCCTGGGTATGG 86339 33 100.0 33 ................................. TGACAAATGCTTTATCATAGCTTCTTTGGTTTT 86273 33 100.0 37 ................................. CGTTCCATCAGCCGGATAAGCGCCGGGGATTGCGTCA 86203 33 100.0 34 ................................. TTGACCGCTGTCCCATGTGTCCCAGTAAAATCCA 86136 33 100.0 33 ................................. TAACTGCAAACTATACTATAACATCTTTAATAG 86070 33 100.0 33 ................................. CCCGTGTGGTCCAGTACCGCCGCGGCATTGGAG 86004 33 100.0 35 ................................. GTTGTTGATGGAGAGATAAAGATTACGCTCAAATT 85936 33 100.0 35 ................................. CGCATTTTTTACCTGGATGCGTAAAGAAAAGCTGA 85868 33 100.0 33 ................................. ACTCTGTGGCTGTTTTATCACGATGGACATGCA 85802 33 100.0 33 ................................. GCTTTGTCAGGTCATCTTTGGCATCCTTGTATT 85736 33 100.0 34 ................................. GTCCATCGGCACCGCCTTAATCCATCCATGGGGC 85669 33 100.0 34 ................................. AAATATTTTCCTCCTGTGCTTGCGTAATACAGGA 85602 33 100.0 33 ................................. TTTGTAAGTAATGTAGAAAACACCGCAAAAAAT 85536 33 100.0 33 ................................. ATAAATGAAAAGACAGGATGGATTTTTCCCGAT 85470 33 100.0 36 ................................. CCTTATGTCCAATTGCCCATTCAAGCACTTTCGGAG 85401 33 100.0 35 ................................. GCGGGAATGTCGGTTGACCAGTACCGGACCATGAT 85333 33 100.0 33 ................................. TCTTATACTCATAATAGATTTCCTCCATGGTAT 85267 33 100.0 34 ................................. TCGATGATGGACAGCAACTCATTGAGTAAGTACC 85200 33 100.0 35 ................................. TGTTGCTGCAGGTAAAAAAATGAACGGCGTTATAG 85132 33 100.0 34 ................................. GTCTGTTACTGTAAATGTAAGCTCATTTTCACTT 85065 33 100.0 34 ................................. AACATGATTTTTAATGTGCAATCATATGTTGTAT 84998 33 100.0 33 ................................. AATCGCAAGGACATTATAAATCCTTGAAATTCG 84932 33 100.0 36 ................................. TTATCCCATTTCTGGGCGCTTGACAGGGCATTATAT 84863 33 100.0 34 ................................. TCGTATACGCTTTCCTATATCAGCCATAATTGTC 84796 33 100.0 34 ................................. TGTGCATATAAGGAGGATTTTATTATGGCAGATT 84729 33 100.0 35 ................................. CGGTTCAAATCCACATGATTCACATGGCTTACTTT 84661 33 100.0 34 ................................. TTACATTGTCGAAAGGGAAAGGTTACTATATACC 84594 33 100.0 34 ................................. AGCATGCTCAATATGAGCTTGACGGAAATGTAAT 84527 33 100.0 36 ................................. ATTGATGATACGCAGCAACAGGCACAGCGGAACATG 84458 33 100.0 34 ................................. CTGAGAGCGCGAATCCTTATCAAATTGTATACGA 84391 33 100.0 35 ................................. TCTTGCGGCAATTTTACAATTGCCATTTTCCAACC 84323 33 100.0 34 ................................. TGTTTGCAGCAAACCGGATATATTCTTGCAATTG 84256 33 100.0 34 ................................. TGGACAACGAATTATTAGAAAGAAACTGTTTGCA 84189 33 100.0 35 ................................. ATCACCATCGGATGGGGTTGCTACCCTCAAGGTGC 84121 33 100.0 35 ................................. TATATAATATACCATCTTCGGAAATATGCAACACG 84053 33 100.0 35 ................................. AATCGAGCGTAAAGGCAAGAAAAATATTTTTAGGT 83985 33 100.0 36 ................................. GGGAAAAGATTATAATACTGGCTTAGGAGATTATTG 83916 33 100.0 35 ................................. AAGCAAGGGTATATAATGCGCTACTTGTAGGTAAA 83848 33 100.0 34 ................................. GTAACTAGGCCCGTATTATTGATACTGGACGTTG 83781 33 100.0 33 ................................. ACAACGGCCCTGTTAGCCAATCCGGTAACCTGG 83715 33 100.0 35 ................................. ACGAACTTGAAGGTGACCGCCTACAACGCATACGC 83647 33 100.0 36 ................................. GGATATTGTTTGAACCAGATTCCTATGAAAGGCAGC 83578 33 100.0 34 ................................. CATTAGCATTAGCCAAATTAGAAATTACTCCGAA 83511 33 100.0 34 ................................. TCTGATGCTGAGTTAAAAACTTTATGGGAAAACG 83444 33 100.0 33 ................................. CTTAGGCGCTTCGTGCAGGCCTCAAAGAATAGC 83378 33 100.0 34 ................................. TGTAATTATAAGACATTCGTGGTCAATGTGGACG 83311 33 100.0 33 ................................. ATCAAAGGGGCAATGCTCCAGTATGTACTTGGT 83245 33 100.0 35 ................................. CACCGGAGACGTCCTTATGAGCCATGGAGCAAATC 83177 33 100.0 34 ................................. CCCTTCTCATTGACAGTGTGCTTGTGGCGTACCG 83110 33 100.0 33 ................................. CCAGGATGGCACCGGACTGAACAATATCAACAC 83044 33 100.0 34 ................................. AGCTGTCAGTATAGCTCCCTGTCCCACGATTGTA 82977 33 100.0 34 ................................. AGCCAAATTTTTTAGCTTATTAAATTAATCTTAC 82910 33 100.0 33 ................................. CTGGTCCATCGGCAAGTCACGGTACCCTGTACC 82844 33 100.0 34 ................................. AGCTGTCAGTATAGCTCCCTGTCCCACGATTGTA 82777 33 100.0 34 ................................. GTATGCGGTCTATATTTTTCACTTCAATCTTCCT 82710 33 100.0 36 ................................. CACCATGGTCTGTCCGGGGAGTTGAACCCCGCCCTG 82641 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 67 33 100.0 34 GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT # Left flank : AAGTCCTGGAATTTCCGGAGAAATGTGGATTTCTGGCAGTGGCCGGAACAGCGGTGGCCCTGAAAGCGGGAAATCTGGCAGCTGTAATGGAACGCCAGGGCAGGGTACTGCGCATTTACGATGTCAATGATATGAAGGAAGTGATGGCGGAATTTGTCCGTGCGTTCAAGCAGGGAGCTATATATCCGGAACAAAAGAGGCTTGTTTTGAAAGAGTATCCGGCGGAGGCGGCAGAGGCACTGCAGCATGCGGGATATATGCGTGAAATGAAGGATTATGTAGTGTATAAGTAGAGTGTGATTTCTGTGAGGCGGAATCCCATCAAACCAGGTGCGAATGCCAAGCTAACATGAAATGCCTGGGAGATTCGCACCTGAAAAACAGCGGAAAAGCCGTGAAAATAGGCTGGGTGAATGGATGGAGGAGGTTGAAATAAGGAGGGGAGGACATAATGCATAAAAAGTTAGGGGGATGTGGAGGGATTGTTGGATAGTTTTGCT # Right flank : ATAACATGCTTTATATACATATGCTTTTCCTTTCCACCACTGCTGGATATGTGGTTTATTTTAGCTGGCTGATTTCGTGATAGGCTTCCAGAATACCATTTTTGGCTGCTTTTTATACAGTATCAATATCAACCCAATACCAACACTCACCCAATACCACCCCAATACTAACACCAATTCTTAATCATGCAGAACCATTAGGCAATTGCGAAACTCACTGACCAGAATTTATGCACATCGTATAGGAATGAATCTAAATTGAATATATTAAGCAAGATATTTTGTGCAAGGTGAATATAAAAATTCAGAGTTTCGTAATTACCTAATGCAGAACCATTTATGAAAGGAGAGGGAAAAGCCATGAAACAGATGTCATTATTCGATGACAGAGAAGTATACAATCCCCTGGCCAGCAGGCTGCGTCCGGATGACCTGGATGGATTTGTGGGACAGGAGCATCTTTTGGGAAAGGGGAAGCTGCTGCGCCAGCTCATAGAGCA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //