Array 1 214503-216452 **** Predicted by CRISPRDetect 2.4 *** >NZ_NXDG01000003.1 Moraxella catarrhalis strain 2023641W 2023641W_contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 214503 28 100.0 32 ............................ TTTCTTTTTTCGTCAGCCTGATGGCGAGCAAC 214563 28 100.0 32 ............................ TCTTTAATCAAGCGTTTTTTGGCGGCAGGGTC 214623 28 100.0 33 ............................ ACCGCTTCTGCGATTGGGGCGGCGGTTTCTTCA 214684 28 100.0 32 ............................ TTGCCAAGCATTTAAATGTAGAAATTGGCATA 214744 28 100.0 32 ............................ TCATCAATACCAATGCGATGCTTAACGGTAAT 214804 28 100.0 32 ............................ ATTAGCACCAGTGCCATCTTAAAAGGTGATGC 214864 28 100.0 32 ............................ TGACTATCAACACTAAAATTACTGCCAATGCT 214924 28 100.0 32 ............................ CCGAACATCCGAGGCGGTAGTATCAGCATCGG 214984 28 100.0 32 ............................ AAAGTGCCAACCAATTATAACCCCATCACTCG 215044 28 100.0 33 ............................ ATCACGCCTAATAGCACCTCCGAGCTTGTCAGT 215105 28 100.0 32 ............................ TTTGGCATGAGCATCTGAGAAATACCGCCTAC 215165 28 100.0 32 ............................ AGCCGCCCGCACACACACAAAACGCATATAAG 215225 28 100.0 32 ............................ TTTGGCTAAAATGTACCCACATTTAGGCATTC 215285 28 100.0 32 ............................ GTGGGGTCATACGCCCCAAAAATGATGGCCAC 215345 28 100.0 32 ............................ ACAAAGTCAAACACCCACGCTTTACTCACCGC 215405 28 100.0 32 ............................ AGCTTGCCACCGCTCAAAACGAGCTAAGCACC 215465 28 100.0 32 ............................ AATCAGGGGGCAAAGGACGCACGCCACAAATT 215525 28 100.0 32 ............................ CAAAAATGATGGCCACAAAGTCAAACACCCAC 215585 28 100.0 32 ............................ CTAGCCGCTGGCATCATGCTGACCGCTTTGAT 215645 28 100.0 32 ............................ GCTAACAGAGCTTTCAACTGTGTTAATGCGTA 215705 28 100.0 32 ............................ GAGCAAATACGCAAATTACCGCTCCGAATATC 215765 28 100.0 32 ............................ ATTTTCACGGTTCTGCTGACGCAACGCTCCCC 215825 28 100.0 32 ............................ GAGCTTTGACAAGAAAGCAAGAGCAATTAACT 215885 28 96.4 32 .......G.................... CAGTTGCATGGGAAGCGTTAACCAAGACTAAA 215945 28 100.0 32 ............................ ATGCTGTTATCGCGCTCATCTTTGGGCAAAGA 216005 28 100.0 32 ............................ GTCAAATCTTTTTGAGCTGATTAAACTTCAAA 216065 28 100.0 32 ............................ CTGCTAGTCGCATGAAAATTAACAGCAATGGC 216125 28 100.0 32 ............................ AAATCACGGATAGATGATGTATGACCATTCAC 216185 28 100.0 32 ............................ AGCTTGCAAATAAAGCAAGTACAGCGTCAGTT 216245 28 100.0 32 ............................ TAGCACCGCCCAGCCGCCCACACACGCACATC 216305 28 100.0 32 ............................ ACATCATCGCCGACATTTTGCACGATGACAAG 216365 28 100.0 32 ............................ AAGCGATTAATCCGCTCACCAATTGTTCTGTT 216425 28 96.4 0 ..........A................. | ========== ====== ====== ====== ============================ ================================= ================== 33 28 99.8 32 CTTCACGACCGCACAGGTCGCTTAGAAA # Left flank : TGCCTGTGCCAAGTAAAATGACCGTCGTGTTGGCGATCGGAATATTATAATAGTGGTTTTGGTATTTCGTTTCGGTCAGGTATAAGATACGCCCATCTTTTTGCATGACTCGGCAATGCTCAAGATAAAATAAATTCGCCCGTTTGGAGTGTAAAATTGCTTTCAAATCGGTCGGTTTGAGCGTATTCATAATAATACAAATCCATGTTTAATGATTCAATTTTATCCTAACAATTTTCAACATCATTTAATATGATTTTATTGGATTATAAACTAAAAATAAATTTATACCAATCATTTTTTAATTGTATTTAGCGATTAAAATGTTTTAAGATAACTCAACCAGAAGATGGAAAAATAACTGATTGACCCTTTATTTTTTTACTATTTAAAAACTTGAATATTTTCAATAAGTTATAACATGAAGATTTTTGATTGGGTTTTTGACAAATTTTATCATAATGACTTGTTATTTCTTATTATTTTGGTTTATACTAACT # Right flank : ATTTTGTTCTATGGCTACGCTGATTATTTAAAATTTTTGTGCCAATCCCTTGAAAATTTTATCCTTAACCATTATGAAGATGGGGAATTTATATTAACTTTTTTGGGGCAATTTATGACCGAGCAAACCACCGAACAAACCACTATGGAAGAGATTATGGCTGAGACGACAACCGAGCAAGTCGAAGCACTTCATAGCCAAATCCAAGCGCTAGAAAATGAAGTCAAAGAAGCCAAAGAGACTGCTGTGCGTGCCAATGCCGAAAGCTATAACGCCCAACGCCGCATGGAACAAGAAACCGACAAAGCCAAAAAATTTGCACTACAAAAGTTTGCCAAAGAGCTTTTGGAGGTGGTTGACAACCTAGAGCGTGCCATTAAAGATGCTGAAGAGACAGGTGCAGATGACGCATCACTTAAAGGCATTCGCCTAACACATAAAGTACTGCTTAGCGTTCTTGAAAAAAATGGCGTCGTGGCCGTGGGTAATGTCGGTGATAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACGACCGCACAGGTCGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTCACGACCGCACAGGTCGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.40,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //