Array 1 226256-225994 **** Predicted by CRISPRDetect 2.4 *** >NZ_JEUY01000005.1 Staphylococcus aureus F85184 adHvQ-supercont1.5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 226255 29 100.0 29 ............................. CAGAGAATTTCGAAAAGAAATTCTACAGG 226197 29 100.0 33 ............................. CAGAAGCTGACGAAAAGTCAGCTTACAATAATG 226135 25 79.3 30 ---...A........A-............ AAGAGAAATTGGATTCCCAATTTCTACAGA 226080 29 96.6 29 ......A...................... CAGAGAATTTCGAAAAGAAATTCTACAGG 226022 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 5 29 95.2 30 CAATGCGAGTTGGGGTGTGGGCCCCAACA # Left flank : AGTTCCTTACCTCTTAAATCAATTGCAATTGCCACTTTTCTTAAGGATGGATTTCCTTGTTCCATCAACTCTACAAATTTAGGCAATAACACTGGTGGTAGATTATCTACACAAAAATATCCCATGTCTTCTAAACATTGAATAACCAAAGATTTACCTGCGCCAGATAAACCTGTTACAACTAATAGTTCACTTTTACTTTTTTCTTTTTCATTATTATCCATTATTTTTTCACCGCCAAAACGAATTTCATGATGTTAATTTAAATGTTCTATGACAAAATTAAGCAACGATGTTTTATATTTATTTCCAACTATGTCTAGATTAAATTTCTAAAAATATACATCATTTAAAAGGAGCTTGGGACATAAATCAATGTCCTAGGGTCTATAATATTATATTGCTAGTAGTTGACTGAATGAAAATGCGCTTGCAACAAGCTTTTTTCAACTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGG # Right flank : TAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTGGGGTGGGACAACGATAAAGTAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCTGTGGCTAATGTTTAAGAACCACTACATAATAAATCATTAGTGGCTCTTTATCATTTCTGTCCCACTCCCATAAAGTTATAAGTTTAATATAACATATAAAAAAACTAGAACTCATTGAAACGCACAAATGATACGTACTAAGTTCTAGTTTTCTATATAATTTGCTTTAATTTAAAAGTAAGACATTATTTTAACGCTGTGATGACACTATTAAAATAAATATCCAAATAATTTACAGCTCAACATCTTAATTCGACTTCGAATTAAGCTTGATCGTTTAAATGTTCAATATATTCCGCTGCA # Questionable array : NO Score: 2.62 # Score Detail : 1:0, 2:0, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAATGCGAGTTGGGGTGTGGGCCCCAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.10,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA //