Array 1 373410-371762 **** Predicted by CRISPRDetect 2.4 *** >NZ_MNAN01000037.1 Pseudoalteromonas byunsanensis strain JCM 12483 1068, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 373409 28 100.0 32 ............................ ATTTGAGTTTTGGCATGTACGCCTTTTCTGAT 373349 28 100.0 32 ............................ TGTTTGAGTGAGCTGAGACTTAAGTTTTGCTT 373289 28 100.0 32 ............................ TATTACATGGGCATCGCGGGCAATTTCGTCGT 373229 28 100.0 32 ............................ TAGATACCCAAAGTAAGCGGCACTGCGAGAAT 373169 28 100.0 32 ............................ GTATTTGGGCTGTTTAATTCGAGCACCTACTG 373109 28 100.0 32 ............................ TTATTAAGTGCATTGACAAGCGCTTCAGGCAT 373049 28 100.0 32 ............................ AAAGAGATCACTATAGATAACTTAGCTTATAA 372989 28 100.0 32 ............................ AGTGGTCAGGCCGTATCGGTGTATATGAATTC 372929 28 100.0 32 ............................ AGCTAGTAAGCTTTAACCATCAACACAAATAT 372869 28 100.0 32 ............................ ACTCTGAAAACTTACTGATCAAGTATTGCTGA 372809 28 100.0 32 ............................ TAACTACGATGCAAGCCTGTTTCACCCAGCGC 372749 28 100.0 32 ............................ TGGTTTGATGACAATATTAACGAGGGTGGCGA 372689 28 100.0 32 ............................ TCAACAGGTGGTGTAACTTCTCTACTGTTCTC 372629 28 100.0 32 ............................ CGAATATAGTACATTGTATGATGAGAAACTTT 372569 28 100.0 32 ............................ GAATGTGAACGAGCCAAAGAATAGTGCGGCCA 372509 28 100.0 32 ............................ TGAGGATAGTATCATCCCTGACTTTCTAAACA 372449 28 100.0 32 ............................ GCTAATGGCACCAGAATTATCTAATACTAAAA 372389 28 100.0 32 ............................ AGCGAGTAGAACTAATTGCCCCTGATTCAGTT 372329 28 100.0 32 ............................ ATTCGACTATGGTACTTAACTAAATAAAATCC 372269 28 100.0 32 ............................ TTATAACCCATCGACCGTAGCAATTTAACATC 372209 28 100.0 32 ............................ TAGTTACTTTGGATTTTTCAAACACAAATGCT 372149 28 100.0 32 ............................ CGCAATAGATGCTATCCCGAGAGTTTCATAGC 372089 28 100.0 32 ............................ AATTGGGCATGTGCAGTATGTGATTGCTTTAG 372029 28 100.0 32 ............................ GAGAGAAGAGGCGCTATCTCAACTAGAGCACG 371969 28 100.0 32 ............................ ACCCACCAACTTAGCCATATCATCGGCATATT 371909 28 100.0 32 ............................ TGTCAGCAAAATATATGATTCACTTTGTAACA 371849 28 100.0 32 ............................ AAGTTAAAGCGGCGTTTGTAAAAAAAGCTAAA 371789 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 28 28 100.0 32 GTTCACCGCCACACAGGCGGCTCAGAAA # Left flank : CAATATGCGTATTTCAAGCGTTGGCGCTTTAAAAACCCAGATAAACTGCGACAAGAGGTCGATAGCCGAGCGCAAGCCATTGCAACAAAAAATGGTTTTGCTGTTGAAGAAGTTAAAAGCCGTTTGTTGCAAGCAATTGATAACTTTAAGCAACACTCTAAATTGCCTTTTATCAATTTACGGAGTTTGTCGACCGATAGTGTGCTAAGCCCTGCTGAGCGTAGAAAGTTTTTGTTGTTTATTGAGTGCCAAAAAACAAGCAAGCCGAGTGATAACATACCACTGTTGACGTGTTATGGGCTCAGTCGGCGCTCAGAAGCACAGCAAGTCGCAGTGCCGTGGTTTTAAGGCTGGTTGACACCTTAAAAACCCTTTTATTTTTGCTCTTTAAAAACCAATATATAAATCAGTAAGTTGCAATAAGTCGTTTTTCATTAGGTAAAATCGCTATTTTTTACCTAATGACTTGTTGTAACTTATTTTTGTATTAGAATTTTATT # Right flank : ACACCACTGTCATCCTGACGAAGGTCAGGATCTTGTGCCAGTTTTATCGCAATGTGCAAATGGACCCTGAAACAAGTTCAGGGTGACGAGTGATGAGATTGGGAGTTGGGTTGCAAGGTTGAGTTCAGGGTGATGCTCATAGAAATTCGCCCACCTGAGCGAAATCTTACTTGAGGAGAACAAGCTCCAAATGAGCACACCAGATAATCGGTTTAGATGAAATTGTATAAATCCATCCATTCTGGATTCTTCTGCTGGATTAGATTTAATTTCCACTGTCGACGCCAGTTTTTTAACTGTTTCTCTCGGCAAAGTGCCGAGTACATTTGTTCATGGCATTCAAAGTAAACTAGTTGGGTAACATTATACTTCTTTGTGAACCCGTCTACGTAGTGTTGTCGGTGTTCGTAGACGCGCTTTTTTAAGTTACTTGTTACGCCAATATATAGTACACCTTTTGGCTTTGAGCAGAGTATATACACGGCTGGTTGCATTGACTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACCGCCACACAGGCGGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACCGCCACACAGGCGGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.90,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 384432-383323 **** Predicted by CRISPRDetect 2.4 *** >NZ_MNAN01000037.1 Pseudoalteromonas byunsanensis strain JCM 12483 1068, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 384431 28 100.0 32 ............................ AAACGAATAAAGTTCGCCATTTGATACGTAAT 384371 28 100.0 32 ............................ GTATAAATGGCCCAAGTAGGCACACCCTTGCT 384311 28 100.0 32 ............................ TTTATTACCTAAAGGAGTCTCCGCTACCAAAA 384251 28 100.0 32 ............................ TTTGTGATTTCTCTTGCCATAACCGGCGGAAC 384191 28 100.0 32 ............................ ACATGAAGTTTTCAATGGAAGTGAGAGGTTTG 384131 28 100.0 32 ............................ AAGTTAATTTTGAGGGTGGTGAGCCGCCCAAA 384071 28 100.0 32 ............................ GTAAACAACTGACCAACCGTTTCCGTCACCGT 384011 28 100.0 32 ............................ ACAATGTAGTTGGGTGGGTGGTAACGGCCCCA 383951 28 100.0 32 ............................ GTTATTTTGAGTAATACCGATGATTGCATATT 383891 28 100.0 32 ............................ TGGCCCTGCAATGATGTAGATTTTGCCAATGC 383831 28 100.0 32 ............................ TGCGGGGCAGGCAATCAAACATTGAATACCAG 383771 28 100.0 32 ............................ TCGATGGGACTATCGCAAGATAAAGCGGTACA 383711 28 100.0 32 ............................ ACATTTGTAAGGGTCTAGAGGCCGCGTAACTA 383651 28 100.0 32 ............................ ATCAGTGATCAGCTTGGCTAAGCCTTCAATCA 383591 28 100.0 32 ............................ CCATACTTGAACGTAGATATGGCTGGTTGTTT 383531 28 100.0 32 ............................ TCTGCTTCTAGCTCAATAGCAAGACAAGTTAC 383471 28 100.0 33 ............................ AGATACAGGGGATCTTATTGCTGATTGCGGTAA 383410 28 100.0 32 ............................ AATCTTCAATGTCATTCATTGGGTCATATGTC 383350 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 19 28 100.0 32 GTTCACCGCCACACAGGCGGCTCAGAAA # Left flank : AACAGCACAACCATTCCAGACAATGAATTTGGCGTAAAAGCCGGAGCGATCCCCGCAATGCGCTGCGCAAAAGCCACCCACTTTGGCAGCCATGATAACTTAGAAAAAACCATTTATGCTTTGTATGAGCAATGGCTACCGCAAAACCAAGAGCAACTTGGCGACCATCCAGTGTTCTTTGAGTATCTAAACCTCATTCACGAAGTGGATGAATGCGACCTACGCACCGATGTGTATTTGCCTCTGGTGTAAACTCTGTGCAGGGCGAATCGGTTGATAGGTGTAAATGGGGATTACAGTTGGTTTTTCGAAGTGTGCAACCAATGCGTGACTATGGCAATATAAAGCAAAAGTTGATCAGGTATGATATACCATACTTTGTTGCCCCTCATTAATGCTCTTTAAAATCAATAAACTAAAGAACCGAAGAAAAATAAGGTATTTTTCTTAAATTGGCTATAACTTGTTTATTTCTTGAGTTTTTTAGCTAATATTCTATT # Right flank : ACACCACTGTCATCCTGACGAAGGTCAGGATCTTGTGCCAGTTTTATCGCAATGTGCAAATGGACCCTGAAACAAGTTCAGGGTGACAGTTTGATTTAGAATGTCTGGATATAGGTACAGGCGGCTCAGAAAACACCACTGTCATCCTGACGAAGGTCAGGATCTTGTGCCAGTTTTATCGCAATGTGCAGATGGACCCTGAAACAAGTTCAGGGTGACGGTTTGATTTAGAATGTCTGGATATAGGCACAGGCGGCTCAGAAAACACCACTGTCATCCTGACGAAGGTCAGGATCTTGTGTCAGCTTTATCGCGATGTGCAGATGGACCCTGAAACAAGTTCAGGGTGACGGTTTGATTTAGAATGTCTGGATATAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGTGACGATTGATGAGATTGGGAGTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACCGCCACACAGGCGGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACCGCCACACAGGCGGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.90,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //