Array 1 1604961-1602406 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP044492.1 Streptococcus mutans strain T8 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1604960 32 100.0 34 ................................ TCTAAATCCTTAGCAATTTCTTTTAGCTCTTTTC 1604894 32 100.0 34 ................................ AAAAACAAGCTCTAAAATTTTATTGGAATTAATT 1604828 32 100.0 36 ................................ AGCTACTCTCACTCGCTGATTTTCTCTGTAACGTTT 1604760 32 100.0 34 ................................ AATTAGCTTTAAACACTCAGCACGCCAAGTTTTC 1604694 32 100.0 34 ................................ ACCACTGACGGCATAACCACCTTTGCCATCACTA 1604628 32 100.0 33 ................................ AAAAATAAAGACCCGGTAAATATCTGGGAAGAG 1604563 32 100.0 35 ................................ TATAGAGCGTTTGACAGGGACTATTGTCCCAAGCA 1604496 32 100.0 36 ................................ ATATCTATCAATCAATCTTAGACGACACAGATCAAA 1604428 32 100.0 34 ................................ CCAAACAACACGACCACCAACATAATCAAAACCA 1604362 32 100.0 33 ................................ TTAGCAATTTGTTTCGTGATTGCAAAAAGTTCA 1604297 32 100.0 34 ................................ TGGTACGTTAAAGCGCACCCAACCACCAAACCAA 1604231 32 100.0 33 ................................ TGATTTCAATATCTCTTTTAAATCTCCATGAAT 1604166 32 100.0 35 ................................ AATTTAAAGTTTAGTTTGATTATTTCTTTTGTGAG 1604099 32 100.0 34 ................................ TTGGATAGGTCACACCGTTAATCCAGTCAGTGAG 1604033 32 100.0 33 ................................ TTTCGTCCGAATTGGTTATTAATTGCCAGATTA 1603968 32 100.0 34 ................................ ATTTAAGACAATTGCAGACCAACAAGCAAATCTC 1603902 32 100.0 34 ................................ TTATCTGGAAAGATAGAATATTGTGTCCCTGATT 1603836 32 100.0 34 ................................ ACGGTCTATTTGCGATATGCTAAGCGTATGTAAC 1603770 32 100.0 35 ................................ AGTTCAAAAGGAACATTCATATGTACATCCAACAC 1603703 32 100.0 34 ................................ AAGAAATTCAGGTGGATAAAGAACTTAATGACTA 1603637 32 100.0 35 ................................ TGTATGGAATACATTGACATACCAATGATACTCAT 1603570 32 100.0 36 ................................ CTATAGATATATACTCATCATTTGCATCAATTACTC 1603502 32 100.0 34 ................................ TTCATTTTACATATTTATTATACCACGCATTGCG 1603436 32 100.0 34 ................................ TTATAGAGAACAGTCAAAGCCACTCCCACAGTGG 1603370 32 100.0 35 ................................ AATAATAGTTTCTTCTCTTGACCAATTATCATAAA 1603303 32 100.0 35 ................................ ATCTATTTCGACCAAAACACAAAAACGCTTGACCT 1603236 32 100.0 35 ................................ AACCAGACTTGGGAAGAATCCCGTCCCTGAAGCGT 1603169 32 100.0 33 ................................ AATTTGCGCTCGCTCCTCTCAAGGTGATTGGCG 1603104 32 100.0 35 ................................ ATAAAAATCAGTCTCCATAAAATCGTTGACCGACC 1603037 32 100.0 35 ................................ CTGAATATGAGGTGACTCATGGATGATTTACAACG 1602970 32 100.0 34 ................................ ACGTCTTTCCAATACACGACCAATAGATTCTAAA 1602904 32 100.0 34 ................................ ATTGCCATGGTTTGAAGCTGTTCAAGATTTTAAA 1602838 32 100.0 34 ................................ ATATATCTAAGGATTTGAAGGAAGTTGCTAAACA 1602772 32 100.0 35 ................................ ATATTTTTCGGGTATGAAAGCTTTATGCATATAAT 1602705 32 100.0 35 ................................ ATATTTTTCGGGTATGAAAGCTTTATGCATATAAT 1602638 32 100.0 35 ................................ ACGACATCAAGGCGGAGATGTCATTTCACTTGTTG 1602571 32 100.0 35 ................................ CACTATGGTCTAGAACATGGTATTCCTTCAGTAGC 1602504 32 96.9 35 ....T........................... TTTCAACTCTGTATCAAATCCAAAAAGCATAGTTG 1602437 32 96.9 0 ...............A................ | ========== ====== ====== ====== ================================ ==================================== ================== 39 32 99.8 34 GTCGCACCCTTCACGGGTGCGTGGATTGAAAT # Left flank : TAAAGCTATTCGTGGAGAATTAGAATCTTATCCACCATTCTTAATCTAGGAGCAAATTTATGATGGTTTTAGTGACTTATGATGTCAATACGGAGACTGTAGCAGGAAAGAAACGACTACGACATGTCGCAAAACTCTGTGTTGATTATGGTCAGCGTGTGCAACATTCGGTTTTTGAGTGTTCAGTGACACCAGCCGAATTTGTAGAGATTAAAAATGAACTCTCAACAATCATTGACCAAAAATCAGACAGCATCCGATTTTATTTACTTGGCAAAAATTGGCAAAATCGGGTAGAAACGATGGGCCGAGATGACAGTTATGACCCCGATGTGGGGGTACTGCTTTTATAAAAATTTGTGTGCGAATCTGGGTTGCACATCAAAACCAGAGACATTCGCGCACAAAACCAGAACTATAGTGATAAAAATTCAGTTTTTATTGAGCCAATTGGTTTAATAAATTCTCGATTTTAGTCACAAACGGTGCAACTACGCGCC # Right flank : TGAAATCAATCGCATAGTATATGAAATGAGTTTTGTCGCACCCTTTAAAGGTTGGGTTTGCTTTTTGGTATAATAAAAGATAATAAAGGTGGAGAATTTTTTATAAAAATGTCTGGCACTGATTTTAACAAAGGAAAGAGTTCGTCCATGAAAGCAACATACAACATTGATAATCCCAATTTACCTTATCAGACCAACCTTGAACTTTGGCAGACAAGTTTTGGTCTTTCAGCAGGTGGATGGCTTAACGCCATCAGCTTATATGGAAGAATTGGCTGAGAAGCAGGCGCATGGAGATTATTCTTATGAATAGGTCTATGAGGAAATCATTGATTATCACAAATCAACGGATGACAGCACGGCTGAGGCTGATTTGGTTTCCTTGCGTATTGCATAGCATCGGGTTTAGCTTTAGTCCAGCTATCTTGCTGACAATTTGGTGTGAACTGTTTCAGAATATTTTTGGTTGTTCCATTCTCATTGGTTAGTTTCGTCAAACA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTTCACGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.50,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //