Array 1 183-33 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_ANKW01000064.1 Lacticaseibacillus paracasei subsp. paracasei Lpp122 contig00064, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
       182	    28	 100.0	    33	............................	TGCCGAGCGTCTTCGTAATAGTTCGACTACAAA	
       121	    28	 100.0	    33	............................	CATAAAAGATTATTTTTAAATTTGATTGTGTAG	
        60	    28	 100.0	     0	............................	|                                	
==========	======	======	======	============================	=================================	==================
         3	    28	 100.0	    34	GTTTTCCCCGCACATGCGGGGGTGATCC	                                 	       

# Left flank :   GAACGAGATGCAATTATTGCCATTGGGGCGGTAAAAGGACCGTCAGTTAACGAAACCGAAAAATTCACTACCTTGGTGAATCCACGAAGGCCGCTTCCATCAACGGTTGCCAAGTTGACGGGATTGTCGGCGGAGGAGTTGGTTGCCAATGGGATCAGTCTGAGCGAGGCAGTGCAGGCCTTACGGGATTTTACCGGCTCGCTCCCTTTAGTCGGATATAATCTGCGTTTCGACATGGGATTTCTTTCGGCAGCGGGTCGTGAAACTGGGTTAACGTCTTTTGGGAATCAGACTTTTGATTTACTACCGCTTGTTAAGAAATCCAGTCGCTTTCTGGATAATTACAAGCTTAGTACAGTGCTGGCACATTATCAGATCGATAACGAGCAACCGCATCACGCGTTGTCTGATGCGACGGCAACAATGGCACTGGCGGACAAACTCATAAAAAAAGGAATCTTAACGATTGGCAAACGTTGATGGGATAGGGATTTTTTAGT
# Right flank :  CCACTTTCCAACGTATGAAAACAACTGAAAGTG

# Questionable array : NO	 Score: 5.67
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTCCCCGCACATGCGGGGGTGATCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [7,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched CTGTTCCCCGCACGTGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.30,-13.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [33.3-66.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.14   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
//


Array 1 13-164 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_ANKW01000087.1 Lacticaseibacillus paracasei subsp. paracasei Lpp122 contig00087, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence               	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	==============================	===============================	==================
        13	    30	 100.0	    31	..............................	TGGCTAGCGATGGTATTATTTCTGGGGCTGA	
        74	    30	  96.7	    31	............................T.	TCAGCCGGAAGCGGTGAAGCTGGCGCGTTTG	
       135	    30	  96.7	     0	.......C......................	|                              	
==========	======	======	======	==============================	===============================	==================
         3	    30	  97.8	    32	GTTTTCCGCGCACATGCGGGGGTGATCCCA	                               	       

# Left flank :   GTTTGACCCTGAG
# Right flank :  AGTAGCCTCTTGGCTAAAATAGGCTTTTATGGTTCTGGTGCAAATTTTCCTCGCTGACTTGATTTTAGGGTTCTGGTGCAAAGTTTACTCAGGGAGAGTGCATCCTGTATCATGAATTGAAACTGGAGGTTTTCAGATGACTGATCATTTTAAAGGACGGCAATTCAATCAATCAGTGATTACTTTTGCCGTAGGCTACTACTTGCGTTACAACATCAGTTATCGAGATCTAGTTGAAATGATGCGCGACCGTGGTATTTTCGTGCATCACACAACCCTCATGCGTTGGGTACAACATTACTCACCGATTATGCGGGCTCTATGGCGTAAGCGCCATCGGCGCACTTCCAAAAGTTGGCGTATGGATGAGACCTATATCAAGATCAAAGGTCAATGGAATTACCTCTACCGTGCCATTGATGATCAAGGTCTTACGCTTGATTTTCAACTGCGCAAGAAGCGTGACTTTAACTCGGCCTATCATTTTCTCAAACGCTTTT

# Questionable array : NO	 Score: 5.56
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTCCGCGCACATGCGGGGGTGATCCCA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-8.60,-5.90] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [10.0-56.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.78,0.64   Confidence: LOW] 

# Array family : NA
//